Miyakogusa Predicted Gene

Lj1g3v0297930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0297930.1 Non Characterized Hit- tr|G7IFR9|G7IFR9_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,34.47,6e-19,seg,NULL; Di19,Drought induced 19/ RING finger
protein 114,CUFF.25505.1
         (204 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g104770.1 | drought-induced protein | HC | chr4:43413100-4...   121   4e-28
Medtr2g028420.1 | hypothetical protein | LC | chr2:10534983-1053...    63   2e-10
Medtr3g076880.1 | hypothetical protein | LC | chr3:34527979-3452...    57   1e-08
Medtr1215s0010.1 | hypothetical protein | LC | scaffold1215:1363...    54   1e-07
Medtr3g076720.1 | transmembrane protein, putative | LC | chr3:34...    54   1e-07

>Medtr4g104770.1 | drought-induced protein | HC |
           chr4:43413100-43409752 | 20130731
          Length = 202

 Score =  121 bits (304), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/205 (40%), Positives = 103/205 (50%), Gaps = 11/205 (5%)

Query: 1   MDFDFRASTIHSANHLSSLHAARLHSEKFSVFSYGXXXXXXAQSLFRCPSCDFEIEVSVL 60
           MD D  AS IHS  H S+L +A LHSE +SV  Y        QS FRCP CDFEI+V  L
Sbjct: 1   MDLDMMAS-IHSTKHFSTLQSAPLHSENYSVIRY-TDVDDDYQSDFRCPFCDFEIQVP-L 57

Query: 61  RTRLQEVHCFDPKNKVCPVCDEKIGEDAVGIPQHSNSRKRTMRFEKSSISSGDLGMIDHK 120
            +  +E +C  PKN VCPVC+E +G +A     HS+SRK   + EKSSI SG+  M   K
Sbjct: 58  CSDFEEEYCSSPKNVVCPVCEENLGNNAFTQFTHSSSRKWGWKTEKSSIWSGNSAMFGKK 117

Query: 121 LASWGNKH--YPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNVKSLGTETLDSD 178
           LA+ GNK    P                                 + N K  GT+     
Sbjct: 118 LAARGNKQESIPDPLLSPFICNVPIPNYNNNHPDENSSLSNKDIEIHNAKRSGTD----- 172

Query: 179 AGDEQDHEERSQRASFVQDLVFSTL 203
            G EQD +E+  RA+FVQ L+ ST+
Sbjct: 173 -GVEQDEQEQWLRATFVQKLMLSTI 196


>Medtr2g028420.1 | hypothetical protein | LC |
           chr2:10534983-10530470 | 20130731
          Length = 320

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 18/171 (10%)

Query: 45  LFRCPSCDFEIEVSVLRTRLQEVHCFDPKNKVCPVCDEKIGEDAVGIPQHSNSRKRTMRF 104
           + +CP CDF+I+VS LR  L++   ++    +CPVCD+ +GED + + Q S+    + +F
Sbjct: 92  VIKCPGCDFDIKVSSLRDYLEDP-TYNSDTMICPVCDKNLGEDVIRMVQ-SSRLPTSPKF 149

Query: 105 E------KSSISSGDLGMIDHKLASWG-NKHYPVXXXXXXXXXXXXXXXXXXXXXXXXXX 157
           +      K  +S  D  + D   ASWG  KH P                           
Sbjct: 150 QHIRNRWKDGVSINDWELYDKINASWGETKHNPTSDSHFSPSRDNVYVPSSNEFFSDEDT 209

Query: 158 XXXXXXVSNVKSL-------GTETLDSDAGDEQDHEERSQRASFVQDLVFS 201
                 +S+   +       G E L++    E+D +ERS +A+F Q+L  S
Sbjct: 210 ISDASDISDANDIPIGKSSGGAEVLNTRH--EEDVQERSNKAAFAQELFMS 258


>Medtr3g076880.1 | hypothetical protein | LC |
           chr3:34527979-34525389 | 20130731
          Length = 259

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 77/171 (45%), Gaps = 19/171 (11%)

Query: 45  LFRCPSCDFEIEVSVLRTRLQEVHCFDPKNKVCPVCDEKIGEDAVGIPQHSN---SRKRT 101
           + +CP CDF IEVS  R+       +D  N  CPVCDE +GEDA+ + Q+++   S+K  
Sbjct: 93  IVKCPVCDFNIEVSTDRSVD-----YDAYNMNCPVCDESLGEDAIRMVQNTSFPISQKWI 147

Query: 102 MR-FEKSSISSGDLGMIDHKLASWG-NKHY-------PVXXXXXXXXXXXXXXXXXXXXX 152
            +  +K+ + +    +   K AS   NKH        P                      
Sbjct: 148 WKPRKKNGVQNVHWEVHGKKDASREHNKHEQMPDSISPAFRENVYLQSLNYILSDEEDTI 207

Query: 153 XXXXXXXXXXXVSNVKSLGTETLDSDAGDEQDHEERSQRASFVQDLVFSTL 203
                       S  KS+GT+   +D  DE D +ER +RA+F Q+L+ STL
Sbjct: 208 SNASDDVVANDTSIAKSIGTDA--TDTRDELDVQERRKRATFSQELLMSTL 256


>Medtr1215s0010.1 | hypothetical protein | LC |
           scaffold1215:1363-547 | 20130731
          Length = 155

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 9/94 (9%)

Query: 45  LFRCPSCDFEIEVSVLRTRLQEVHCFDPKNKVCPVCDEKIGEDAVGIPQHSNSRKRTMRF 104
           + +CP CDF+++VS LR  L++   ++    +CPVCD+ + ED + + Q S+    + +F
Sbjct: 15  VIKCPGCDFDVKVSSLRDYLED-PTYNSHTMICPVCDKNLREDVIRMVQ-SSRLPTSPKF 72

Query: 105 E------KSSISSGDLGMIDHKLASWG-NKHYPV 131
           +      K  +S  D  + D   ASWG  KH P 
Sbjct: 73  QHIRNRWKDGVSINDWELYDKINASWGETKHNPT 106


>Medtr3g076720.1 | transmembrane protein, putative | LC |
           chr3:34479302-34476397 | 20130731
          Length = 398

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 1/50 (2%)

Query: 46  FRCPSCDFEIEVSVLRTRLQEVHCFDPKNKVCPVCDEKIGEDAVGIPQHS 95
            +CP+C F+IEVS LR R  E   +D    +CP+CDE +GEDA  + Q+S
Sbjct: 87  IKCPACTFDIEVSALRHR-SEDQTYDLYTMICPLCDESLGEDATRMVQNS 135