Miyakogusa Predicted Gene

Lj1g3v0271570.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0271570.1 Non Characterized Hit- tr|I1KC60|I1KC60_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,81.33,0,seg,NULL;
coiled-coil,NULL,CUFF.25481.1
         (489 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g075050.1 | nucleic acid-binding, OB-fold-like protein | H...   744   0.0  
Medtr3g075050.2 | nucleic acid-binding, OB-fold-like protein | H...   487   e-137

>Medtr3g075050.1 | nucleic acid-binding, OB-fold-like protein | HC |
           chr3:34079462-34070652 | 20130731
          Length = 668

 Score =  744 bits (1921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/489 (74%), Positives = 398/489 (81%), Gaps = 12/489 (2%)

Query: 1   MQAKRVSVEEIENGVRTETDDVCLDRYKVFLKQYKEWVEANKDRLEEESYEQDQDYHPGR 60
           M+AKRV +E+IENGVRTETDDVCLDRYKVFLKQY EW+EANKD LEEESY+ DQDYHPGR
Sbjct: 192 MEAKRVRLEDIENGVRTETDDVCLDRYKVFLKQYNEWLEANKDLLEEESYKLDQDYHPGR 251

Query: 61  RKRGKDYKEGMYELPFYYPGQICLGKVVNLHLYQGAFVDIGGVYDGWVPIKGNDWFWIRH 120
           RKRGKDYK+GMYELPFYYPGQIC+GKV  LHLYQGAFVDIGGVYDGWVPIK NDWFWIRH
Sbjct: 252 RKRGKDYKDGMYELPFYYPGQICVGKVTTLHLYQGAFVDIGGVYDGWVPIKNNDWFWIRH 311

Query: 121 HITVGMNVFVEITAKRDPYRFRFPIELRFVDPNIDHLIFNRFDFPPIFQRAEDTNPDEVR 180
           HI VGM V VEITAKRDPYRFRFPIELRFVDPNIDHLIFNRFDFPPIF R EDTNPDE+R
Sbjct: 312 HIKVGMTVIVEITAKRDPYRFRFPIELRFVDPNIDHLIFNRFDFPPIFHRDEDTNPDELR 371

Query: 181 RHCGRPPIPRKDPGDKPEEAPLLSNHPYVDKLWQINVAEQMILDDMETNPDKYRGKKLSX 240
           R CGRPPIPRKDPGDKPEE PL SNHPYV+KLWQINVAEQMIL+DM+ NPDKY+GKKLS 
Sbjct: 372 RDCGRPPIPRKDPGDKPEEEPLFSNHPYVEKLWQINVAEQMILNDMDINPDKYKGKKLSD 431

Query: 241 XXXXXXXXEESAVQYSKASYKNSVLQKMTLKTSVKXXXXXXXXXXXXXHIKLMKEAKDRD 300
                   EE +VQ +K  YKN+++ K+T+KTSVK             H KL KEAKDR 
Sbjct: 432 LVDEDDFDEEKSVQQTKVPYKNALVPKITMKTSVKELDLEAALAERELHKKLWKEAKDRG 491

Query: 301 EEYKITKLRRNIEMDEYDYMHWRRSFEEREALLRDISCRKALGLPLEEPGRYVDASYFGK 360
           E+YKI  L+RNIEMDEYD+MHWRRSFEEREAL+RDISCRK LGLPLEEPGRYVDAS+FGK
Sbjct: 492 EDYKIATLKRNIEMDEYDFMHWRRSFEEREALIRDISCRKTLGLPLEEPGRYVDASFFGK 551

Query: 361 GKYDPSSPLYRYDYWGEPKNSEKSRRERRTDTHNKAIVGKGTVWYEMSYEDCIKQQMRRE 420
            +YDP SPLYRYDYWGEPKNSEKSR+ER TDTHNK+IVGKGTVW EM YED +K      
Sbjct: 552 DQYDPESPLYRYDYWGEPKNSEKSRKERMTDTHNKSIVGKGTVWCEMPYEDSVK------ 605

Query: 421 AQSMAQQGKQVKDEDTKQVQGAXXXXXXXXXXXXXXXSILSRLGSNGSDQVHVNGTESSS 480
                 Q K+V DE +KQ + A               SILS LG+N SDQ+HVNGTE+S 
Sbjct: 606 -----HQPKEV-DEYSKQGEAAEEEEEDDDDDDDFDFSILSSLGTNASDQIHVNGTETSR 659

Query: 481 MSDETMFED 489
           +SDE +FED
Sbjct: 660 LSDEGVFED 668


>Medtr3g075050.2 | nucleic acid-binding, OB-fold-like protein | HC |
           chr3:34079462-34070652 | 20130731
          Length = 496

 Score =  487 bits (1253), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 226/275 (82%), Positives = 245/275 (89%)

Query: 1   MQAKRVSVEEIENGVRTETDDVCLDRYKVFLKQYKEWVEANKDRLEEESYEQDQDYHPGR 60
           M+AKRV +E+IENGVRTETDDVCLDRYKVFLKQY EW+EANKD LEEESY+ DQDYHPGR
Sbjct: 192 MEAKRVRLEDIENGVRTETDDVCLDRYKVFLKQYNEWLEANKDLLEEESYKLDQDYHPGR 251

Query: 61  RKRGKDYKEGMYELPFYYPGQICLGKVVNLHLYQGAFVDIGGVYDGWVPIKGNDWFWIRH 120
           RKRGKDYK+GMYELPFYYPGQIC+GKV  LHLYQGAFVDIGGVYDGWVPIK NDWFWIRH
Sbjct: 252 RKRGKDYKDGMYELPFYYPGQICVGKVTTLHLYQGAFVDIGGVYDGWVPIKNNDWFWIRH 311

Query: 121 HITVGMNVFVEITAKRDPYRFRFPIELRFVDPNIDHLIFNRFDFPPIFQRAEDTNPDEVR 180
           HI VGM V VEITAKRDPYRFRFPIELRFVDPNIDHLIFNRFDFPPIF R EDTNPDE+R
Sbjct: 312 HIKVGMTVIVEITAKRDPYRFRFPIELRFVDPNIDHLIFNRFDFPPIFHRDEDTNPDELR 371

Query: 181 RHCGRPPIPRKDPGDKPEEAPLLSNHPYVDKLWQINVAEQMILDDMETNPDKYRGKKLSX 240
           R CGRPPIPRKDPGDKPEE PL SNHPYV+KLWQINVAEQMIL+DM+ NPDKY+GKKLS 
Sbjct: 372 RDCGRPPIPRKDPGDKPEEEPLFSNHPYVEKLWQINVAEQMILNDMDINPDKYKGKKLSD 431

Query: 241 XXXXXXXXEESAVQYSKASYKNSVLQKMTLKTSVK 275
                   EE +VQ +K  YKN+++ K+T+KTSVK
Sbjct: 432 LVDEDDFDEEKSVQQTKVPYKNALVPKITMKTSVK 466