Miyakogusa Predicted Gene
- Lj1g3v0270280.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0270280.1 Non Characterized Hit- tr|K4DDM9|K4DDM9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,48.1,0.000000005,Ring finger,Zinc finger, RING-type;
SNF2_N,SNF2-related; zf-C3HC4_2,NULL; seg,NULL; ZF_RING_2,Zinc
f,NODE_31535_length_3086_cov_12.616980.path1.1
(440 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g089190.1 | DNA/RNA helicase | HC | chr7:34885684-34881166... 257 2e-68
Medtr2g012830.1 | SNF2, helicase and zinc finger protein | HC | ... 96 7e-20
Medtr1g115215.2 | chromatin remodeling protein | HC | chr1:51892... 95 2e-19
Medtr1g115215.1 | chromatin remodeling protein | HC | chr1:51892... 95 2e-19
Medtr2g084630.1 | DNA/RNA helicase | HC | chr2:35865804-35875314... 91 2e-18
Medtr2g084630.2 | DNA/RNA helicase | HC | chr2:35865773-35875405... 91 3e-18
Medtr1g044120.1 | DNA repair helicase rad5,16, putative | HC | c... 60 4e-09
Medtr8g038520.1 | zinc finger, C3HC4 type (RING finger) protein ... 57 2e-08
Medtr4g118845.1 | chromatin remodeling factor, putative | HC | c... 57 3e-08
Medtr4g118845.2 | chromatin remodeling factor, putative | HC | c... 54 2e-07
Medtr5g054550.1 | zinc finger, C3HC4 type (RING finger) protein ... 51 3e-06
Medtr5g005840.1 | chromatin remodeling factor, putative | HC | c... 49 8e-06
Medtr2g020000.1 | chromatin remodeling factor, putative | HC | c... 49 9e-06
>Medtr7g089190.1 | DNA/RNA helicase | HC | chr7:34885684-34881166 |
20130731
Length = 822
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 181/493 (36%), Positives = 262/493 (53%), Gaps = 92/493 (18%)
Query: 34 NIIQTKLLKHQEEALEWLLKRESSVESPAFW-----------------TRSEPLRGGILN 76
+II+++LL+HQ+EAL WL RES+ + P FW R EPLRGGI
Sbjct: 195 SIIKSELLQHQKEALGWLYHRESTQDLPPFWEEKVGNFVNVLTNYQTNARPEPLRGGIFA 254
Query: 77 DSATLGKKLSLLSLIAHEKNK---------------SVETKTTLVVSGYASLKNWLSEVS 121
D LGK L+LLSLI+++K K ET TL+V + + W++++
Sbjct: 255 DGMGLGKTLTLLSLISYDKMKMKSGKKRGRSSVERVESETNGTLIVCPPSVISTWITQLE 314
Query: 122 QHVITGTLKVLNAEFGVCMDIDFHEKVNEYDLLLIH---MGGLVRAMESIPTLEKVWWRT 178
+H GTLKV +G D E++ +YD++L +G +R ++ P + W R
Sbjct: 315 EHTNRGTLKVY-MYYGDRRTQD-AEELRKYDIVLTTYATLGAELRCSDT-PVKKLGWRRI 371
Query: 179 IVDRAHTIEDMDFYASQAVIALKADRKWAVTGKPILNGSYNLLSVLSYLGFESSTICG-- 236
++D AHTI++++ SQAVIAL A R+WAVTG PI NGSY+L S++++L FE +I
Sbjct: 372 VLDEAHTIKNVNAGQSQAVIALNAKRRWAVTGTPIQNGSYDLFSLMAFLHFEPFSIKSYW 431
Query: 237 QSLTD----------------LAASISLGRTKE--ILRLPSQNVEVRYVNFSSEERVLHD 278
QSL L ++ISL RTK+ + LP + VE YV S EER L+D
Sbjct: 432 QSLVQRPLNQGKQTGMSRLQVLMSAISLRRTKDTALGGLPPKIVETCYVELSFEERKLYD 491
Query: 279 KLKHEADSLSGVPNNEDELQ-------NLMFRLIRMCRDSAL-------CFXXXXXXXXX 324
++K E SL N+ D L +++ RL ++C D ++ C
Sbjct: 492 EVKEEIKSLMMHHNSNDRLVSSYSTVLSMILRLRQICADFSMVPLDFKSCL-FSSTDIED 550
Query: 325 XXKKPELQKA----LEDPD--DCAICFTPPEDTLVTKCGHVFCRRCILKHLKTNKKCCPA 378
K PEL + L+D + DC IC +PP D ++T C H+FCR CILK L+ + CP
Sbjct: 551 VSKNPELLQTLIRMLQDGEDFDCPICLSPPTDIVITCCAHIFCRECILKTLQRSNSSCPL 610
Query: 379 CRKRIKKHCLFSA-------------GDYPRPELGSSSKVSELKNLLMESRDESPATKSV 425
CR+ + + LFSA + E+ SS+KVS L LL ESRD++PATKSV
Sbjct: 611 CRRSLSETELFSAPPESFKTDDTDVTTELCTAEVRSSTKVSTLIKLLTESRDQNPATKSV 670
Query: 426 VFSECLEVLRFLK 438
VFS+ ++L L+
Sbjct: 671 VFSQFRKMLLLLE 683
>Medtr2g012830.1 | SNF2, helicase and zinc finger protein | HC |
chr2:3311076-3321817 | 20130731
Length = 1303
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 123/281 (43%), Gaps = 54/281 (19%)
Query: 169 PTLEKVWWRTIVDRAHTIEDMDFYASQAVIALKADRKWAVTGKPILNGSYNLLSVLSYLG 228
P + W+R ++D A +I++ ++A L+A R+W ++G PI N +L S +L
Sbjct: 777 PLAKVAWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLR 836
Query: 229 FES----STICG--------------QSLTDLAASISLGRTK-------EILRLPSQNVE 263
++ ++ C + L + +I L RTK I+ LP ++VE
Sbjct: 837 YDPYAVYTSFCSTIKIPINRNPSKGYRKLQAVLKTIMLRRTKGTLLDGEPIISLPPKSVE 896
Query: 264 VRYVNFSSEERVLHDKLKHEADSLSGVPNNEDE---LQNLMFRLIRMCRDSALCFXXXXX 320
+R V FS EER + KL EADS + D QN + L+ + R C
Sbjct: 897 LRKVEFSQEERDFYSKL--EADSRAQFQEYADAGTVKQNYVNILLMLLRLRQACDHPLLV 954
Query: 321 XXXXXXK--KPELQKALEDPDD---------------CAICFTPPEDTLVTKCGHVFCRR 363
K ++ A++ P + C IC PE+ +V+ CGHVFC +
Sbjct: 955 KRYNSTTLWKSSVETAMKLPREKQLFLLKCLEASLALCGICNDAPEEAVVSVCGHVFCNQ 1014
Query: 364 CILKHLKTNKKCCPA--CRKRIKKHCLFSAGDYPRPELGSS 402
CI +HL CPA C+ R+ +F P+ L SS
Sbjct: 1015 CICEHLTGEDNQCPATNCKTRLNMSAVF-----PKATLNSS 1050
>Medtr1g115215.2 | chromatin remodeling protein | HC |
chr1:51892999-51882725 | 20130731
Length = 1040
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 57/267 (21%)
Query: 175 WWRTIVDRAHTIEDMDFYASQAVIALKADRKWAVTGKPILNGSYNLLSVLSYLGFES--- 231
W+R I+D A TI++ ++A +L+A R+W ++G PI N +L S +L ++
Sbjct: 527 WFRVILDEAQTIKNHRTQMARACSSLRAKRRWCLSGTPIQNTIDDLYSYFRFLKYDPYAV 586
Query: 232 --------------STICG-QSLTDLAASISLGRTK-------EILRLPSQNVEVRYVNF 269
++I G + L + +I L RTK I+ LP + + + V+F
Sbjct: 587 YKSFYNTIKVPISRNSIQGYKKLQAVLRAIMLRRTKGTLLDGKPIITLPPKTINLEKVDF 646
Query: 270 SSEERVLHDKLKHEADSLS---------GVPNNEDELQNLMFRLIRMCRDSALCFXXXXX 320
S EER + KL EADS S V N + ++ RL + C L
Sbjct: 647 SYEERAFYKKL--EADSRSQFKAYAAAGTVNQNYANILLMLLRLRQACDHPLLV----KE 700
Query: 321 XXXXXXKKPELQKALEDPDD---------------CAICFTPPEDTLVTKCGHVFCRRCI 365
K ++ A + P + C +C PP+D++++ CGHVFC +C+
Sbjct: 701 YNSDPVGKDSVEMAKKLPKEMLINLFNSLETTSAICCVCNDPPDDSVISMCGHVFCYQCV 760
Query: 366 LKHLKTNKKCCPA--CRKRIKKHCLFS 390
+HL ++ CPA C++++ + +FS
Sbjct: 761 SEHLTSDDNMCPAVHCKEQLGEDLVFS 787
>Medtr1g115215.1 | chromatin remodeling protein | HC |
chr1:51892999-51882725 | 20130731
Length = 1040
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 57/267 (21%)
Query: 175 WWRTIVDRAHTIEDMDFYASQAVIALKADRKWAVTGKPILNGSYNLLSVLSYLGFES--- 231
W+R I+D A TI++ ++A +L+A R+W ++G PI N +L S +L ++
Sbjct: 527 WFRVILDEAQTIKNHRTQMARACSSLRAKRRWCLSGTPIQNTIDDLYSYFRFLKYDPYAV 586
Query: 232 --------------STICG-QSLTDLAASISLGRTK-------EILRLPSQNVEVRYVNF 269
++I G + L + +I L RTK I+ LP + + + V+F
Sbjct: 587 YKSFYNTIKVPISRNSIQGYKKLQAVLRAIMLRRTKGTLLDGKPIITLPPKTINLEKVDF 646
Query: 270 SSEERVLHDKLKHEADSLS---------GVPNNEDELQNLMFRLIRMCRDSALCFXXXXX 320
S EER + KL EADS S V N + ++ RL + C L
Sbjct: 647 SYEERAFYKKL--EADSRSQFKAYAAAGTVNQNYANILLMLLRLRQACDHPLLV----KE 700
Query: 321 XXXXXXKKPELQKALEDPDD---------------CAICFTPPEDTLVTKCGHVFCRRCI 365
K ++ A + P + C +C PP+D++++ CGHVFC +C+
Sbjct: 701 YNSDPVGKDSVEMAKKLPKEMLINLFNSLETTSAICCVCNDPPDDSVISMCGHVFCYQCV 760
Query: 366 LKHLKTNKKCCPA--CRKRIKKHCLFS 390
+HL ++ CPA C++++ + +FS
Sbjct: 761 SEHLTSDDNMCPAVHCKEQLGEDLVFS 787
>Medtr2g084630.1 | DNA/RNA helicase | HC | chr2:35865804-35875314 |
20130731
Length = 1022
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 164/419 (39%), Gaps = 78/419 (18%)
Query: 94 EKNKSVETKTTLVVSGYASLKNWLSEVSQHVITGTLKVLNAEFGVCMDIDFHEKVNEYDL 153
+KN S+ + L++ L W +E+ HV GTL L +G D + + + D+
Sbjct: 475 KKNTSLTSGGNLIICPMTLLGQWKAEIETHVHPGTLS-LYVHYGQGRPKD-AKSLAQCDV 532
Query: 154 LLIHMGGLVRAMES------IPTLEKVWWRTIVDRAHTIEDMDFYASQAVIALKADRKWA 207
++ G L S W+R ++D AHTI+ S A AL AD +W
Sbjct: 533 VITTYGILASDFSSENGENNGGLFSIRWFRVVLDEAHTIKSSKSQVSMAASALIADNRWC 592
Query: 208 VTGKPILNGSYNLLSVLSYL-----------------GFESSTICGQSLTD-LAASISLG 249
+TG PI N ++ S+L +L FE G L + I L
Sbjct: 593 LTGTPIQNNLEDVYSLLRFLRIEPWGHWAWWNKLIQKPFEGGDERGLKLVQSILKPIMLR 652
Query: 250 RTKE--------ILRLPSQNVEVRYVNFSSEERVLHD------KLKHEADSLSG-VPNNE 294
RTK IL LP ++++ Y + E+ ++ K+K + G V +N
Sbjct: 653 RTKHSTDREGKPILVLPPADMQIIYCEPTEAEKDFYEALFKRSKVKFDQFVEQGRVLHNY 712
Query: 295 DELQNLMFRLIRMCRDSALCFXXXXXXXXXXXKK--------------PELQKALE---- 336
+ L+ RL + C L K E++ AL
Sbjct: 713 ASILELLLRLRQCCDHPFLVMSRGDTQEFADLNKLAKRFLRGTCNASEGEVKDALSRAYV 772
Query: 337 ----------DPDDCAICFTPPEDTLVTKCGHVFCRRCILKHLK-TNKKCCPACRKRIKK 385
+ +C IC ED+++T C H CR C+L + + CP CRK + K
Sbjct: 773 QEVVEELRKGEQGECPICLEAFEDSVLTPCAHRLCRECLLASWRNSTSGLCPVCRKTVSK 832
Query: 386 HCLFSAGDYPRPELG------SSSKVSELKNLLMESRDESPATKSVVFSECLEVLRFLK 438
L +A R ++ S KV+ L N L R S +KS+VFS+ L L+
Sbjct: 833 QDLITAPTESRFQIDIEKNWVESCKVTGLMNELENLR--SSGSKSIVFSQWTAFLDLLQ 889
>Medtr2g084630.2 | DNA/RNA helicase | HC | chr2:35865773-35875405 |
20130731
Length = 1025
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 164/419 (39%), Gaps = 78/419 (18%)
Query: 94 EKNKSVETKTTLVVSGYASLKNWLSEVSQHVITGTLKVLNAEFGVCMDIDFHEKVNEYDL 153
+KN S+ + L++ L W +E+ HV GTL L +G D + + + D+
Sbjct: 469 KKNTSLTSGGNLIICPMTLLGQWKAEIETHVHPGTLS-LYVHYGQGRPKD-AKSLAQCDV 526
Query: 154 LLIHMGGLVRAMES------IPTLEKVWWRTIVDRAHTIEDMDFYASQAVIALKADRKWA 207
++ G L S W+R ++D AHTI+ S A AL AD +W
Sbjct: 527 VITTYGILASDFSSENGENNGGLFSIRWFRVVLDEAHTIKSSKSQVSMAASALIADNRWC 586
Query: 208 VTGKPILNGSYNLLSVLSYL-----------------GFESSTICGQSLTD-LAASISLG 249
+TG PI N ++ S+L +L FE G L + I L
Sbjct: 587 LTGTPIQNNLEDVYSLLRFLRIEPWGHWAWWNKLIQKPFEGGDERGLKLVQSILKPIMLR 646
Query: 250 RTKE--------ILRLPSQNVEVRYVNFSSEERVLHD------KLKHEADSLSG-VPNNE 294
RTK IL LP ++++ Y + E+ ++ K+K + G V +N
Sbjct: 647 RTKHSTDREGKPILVLPPADMQIIYCEPTEAEKDFYEALFKRSKVKFDQFVEQGRVLHNY 706
Query: 295 DELQNLMFRLIRMCRDSALCFXXXXXXXXXXXKK--------------PELQKALE---- 336
+ L+ RL + C L K E++ AL
Sbjct: 707 ASILELLLRLRQCCDHPFLVMSRGDTQEFADLNKLAKRFLRGTCNASEGEVKDALSRAYV 766
Query: 337 ----------DPDDCAICFTPPEDTLVTKCGHVFCRRCILKHLK-TNKKCCPACRKRIKK 385
+ +C IC ED+++T C H CR C+L + + CP CRK + K
Sbjct: 767 QEVVEELRKGEQGECPICLEAFEDSVLTPCAHRLCRECLLASWRNSTSGLCPVCRKTVSK 826
Query: 386 HCLFSAGDYPRPELG------SSSKVSELKNLLMESRDESPATKSVVFSECLEVLRFLK 438
L +A R ++ S KV+ L N L R S +KS+VFS+ L L+
Sbjct: 827 QDLITAPTESRFQIDIEKNWVESCKVTGLMNELENLR--SSGSKSIVFSQWTAFLDLLQ 883
>Medtr1g044120.1 | DNA repair helicase rad5,16, putative | HC |
chr1:16509136-16515621 | 20130731
Length = 1153
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 34/188 (18%)
Query: 71 RGGILNDSATLGKKLSLLSLIAHE---------------------KNKSVETKT-----T 104
RGGIL D+ LGK + ++LI K ++V+ + T
Sbjct: 533 RGGILADAMGLGKTVMTIALILSNPGRLKSEDSDGESVYDNIFSAKRRNVDPSSNLEGGT 592
Query: 105 LVVSGYASLKNWLSEVSQHVITGTLKV-LNAEFGVCMDIDFHEKVNEYDLLLIHMGGLVR 163
L+V A L W E+ H G++ + ++ G + D + +YD++L G L
Sbjct: 593 LIVCPMALLGQWKDELETHSKPGSISIFVHYGGGRTSNPDL---LLDYDVVLTTYGVLSA 649
Query: 164 AMES---IPTLEKV-WWRTIVDRAHTIEDMDFYASQAVIALKADRKWAVTGKPILNGSYN 219
+ +S +V W+R ++D AH I+ ++A IAL + +W +TG P+ N +
Sbjct: 650 SYKSERENSIYHRVQWYRVVLDEAHHIKSHKSQVAEAAIALSSHCRWCLTGTPLQNSLED 709
Query: 220 LLSVLSYL 227
L S+LS+L
Sbjct: 710 LFSLLSFL 717
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 340 DCAICFTPPEDTLVTKCGHVFCRRCILKHLKTNKKC-CPACRKRIKKHCLFS-AGDYP-- 395
+CAIC P+D + T C H FCR C+ T+ CP CR+ +KK+ L + P
Sbjct: 916 ECAICMESPDDPVFTPCAHQFCRECLFNCWGTSMGGKCPICRQILKKNDLIVLPSESPFK 975
Query: 396 ---RPELGSSSKVSELKNLLMESRDESPATKSVVFSECLEVLRFLKS 439
L SSKVS+L + L S+ S KS+VFS+ L++
Sbjct: 976 VDIENNLTESSKVSKLFDFLENSQKYS-DEKSIVFSQWTSFFDLLEN 1021
>Medtr8g038520.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr8:14273647-14276050 | 20130731
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 332 QKALEDPDDCAICFTPPEDTLVTKCGHVFCRRCILKHLKTNKK-----CCPACRKRIKKH 386
+K L++ C+IC + P ++T C HVFC++CI K + KK CP CR + +
Sbjct: 49 RKVLQEKVQCSICLSTPSHAVITGCTHVFCQKCIRKWFTSGKKSKDPTTCPYCRGLLALN 108
Query: 387 CLFSAGDYPRPELGSSSKVSELKNLLMESRDESPATKSVVFS 428
+FS E ++K+ L LL E D S +KSV+F+
Sbjct: 109 DMFS-------ETKPTTKLEILMQLLRE--DTSTKSKSVIFT 141
>Medtr4g118845.1 | chromatin remodeling factor, putative | HC |
chr4:49251792-49260219 | 20130731
Length = 1063
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 27/199 (13%)
Query: 36 IQTKLLKHQEEALEWLLK-RESSVESPAFWTRSEPLRGGILNDSATLGKKLSLLSLIAHE 94
IQ K+ +Q L WL++ E+ + GIL D LGK L +SL+ +
Sbjct: 184 IQGKMRDYQLAGLNWLIRLYENGI-------------NGILADEMGLGKTLQTISLLGYL 230
Query: 95 KNKSVETKTTLVVSGYASLKNWLSEVSQHV-ITGTLKVLNAEFGVCMDIDFHEKVNEYDL 153
T +VV+ ++L NW++E+ + + +K L + D + + E L
Sbjct: 231 HEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGSP-------DERKHIKEELL 283
Query: 154 LLIHMGGLVRAMESI----PTLEKVWWR-TIVDRAHTIEDMDFYASQAVIALKADRKWAV 208
+ V + E + PT + WR I+D AH I++ + S+ + K + + +
Sbjct: 284 VAGKFDVCVTSFEMVIKEKPTFRRFSWRYVIIDEAHRIKNENSLLSKTMREYKTNYRLLI 343
Query: 209 TGKPILNGSYNLLSVLSYL 227
TG P+ N + L S+L++L
Sbjct: 344 TGTPLQNNLHELWSLLNFL 362
>Medtr4g118845.2 | chromatin remodeling factor, putative | HC |
chr4:49253207-49260120 | 20130731
Length = 876
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 13/161 (8%)
Query: 73 GILNDSATLGKKLSLLSLIAHEKNKSVETKTTLVVSGYASLKNWLSEVSQHV-ITGTLKV 131
GIL D LGK L +SL+ + T +VV+ ++L NW++E+ + + +K
Sbjct: 22 GILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKF 81
Query: 132 LNAEFGVCMDIDFHEKVNEYDLLLIHMGGLVRAMESI----PTLEKVWWR-TIVDRAHTI 186
L + D + + E L+ V + E + PT + WR I+D AH I
Sbjct: 82 LGSP-------DERKHIKEELLVAGKFDVCVTSFEMVIKEKPTFRRFSWRYVIIDEAHRI 134
Query: 187 EDMDFYASQAVIALKADRKWAVTGKPILNGSYNLLSVLSYL 227
++ + S+ + K + + +TG P+ N + L S+L++L
Sbjct: 135 KNENSLLSKTMREYKTNYRLLITGTPLQNNLHELWSLLNFL 175
>Medtr5g054550.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr5:22475724-22473709 | 20130731
Length = 164
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 341 CAICFTPPEDTLVTKCGHVFCRRCILKHLKTNKKCCPACRKRI 383
C IC P + + TKCGH+FC+ CI +K K CP CRK+I
Sbjct: 108 CPICMGPFVEEMTTKCGHIFCKTCIKDAIKAQAK-CPTCRKKI 149
>Medtr5g005840.1 | chromatin remodeling factor, putative | HC |
chr5:644652-653059 | 20130731
Length = 1063
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 73 GILNDSATLGKKLSLLSLIAHEKNKSVETKTTLVVSGYASLKNWLSEVSQHV--ITGTL- 129
GIL D LGK + +SLIAH T L+V+ A L NW++E + IT L
Sbjct: 384 GILADEMGLGKTIQTISLIAHLMEYKGVTGPFLIVAPKAVLPNWVNEFATWAPSITAVLY 443
Query: 130 -KVLNAEFGVCMDIDFHEKVNEYDLLLIHMGGLVRAMESIPTLEKVWWRT-IVDRAHTIE 187
++ + +I K N +LL H ++R L+K+ W+ IVD H ++
Sbjct: 444 DGRMDERKAIKEEISGEGKFN---VLLTHYDLIMR---DKAFLKKIHWKYLIVDEGHRLK 497
Query: 188 DMDFYASQAVI-ALKADRKWAVTGKPILNGSYNLLSVLSYL 227
+ + ++ + + +R+ +TG PI N L S+L++L
Sbjct: 498 NHECALARTLDNSYHIERRLLLTGTPIQNSLQELWSLLNFL 538
>Medtr2g020000.1 | chromatin remodeling factor, putative | HC |
chr2:6619806-6610735 | 20130731
Length = 1066
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 49/210 (23%)
Query: 36 IQTKLLKHQEEALEWLLK-RESSVESPAFWTRSEPLRGGILNDSATLGKKLSLLSLIAHE 94
IQ K+ +Q L WL++ E+ + GIL D LGK L +SL+ +
Sbjct: 187 IQGKMRDYQLAGLNWLIRLYENGI-------------NGILADEMGLGKTLQTISLMGYL 233
Query: 95 KNKSVETKTTLVVSGYASLKNWLSEVSQHV-ITGTLKVLN---------------AEFGV 138
+VV+ ++L NW++E+ + I +K L +F V
Sbjct: 234 HEFRGIKGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPEERRHIREDLLVAGKFDV 293
Query: 139 CMDIDFHEKVNEYDLLLIHMGGLVRAMESIPTLEKVWWR-TIVDRAHTIEDMDFYASQAV 197
C V +++ A++ TL + WR I+D AH I++ + S+ +
Sbjct: 294 C--------VTSFEM----------AIKEKSTLRRFSWRYIIIDEAHRIKNENSLLSKTM 335
Query: 198 IALKADRKWAVTGKPILNGSYNLLSVLSYL 227
+ + +TG P+ N + L S+L++L
Sbjct: 336 RIYNTNYRLLITGTPLQNNLHELWSLLNFL 365