Miyakogusa Predicted Gene

Lj1g3v0268770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0268770.1 tr|G7KHI2|G7KHI2_MEDTR MADS-box transcription
factor OS=Medicago truncatula GN=MTR_6g005440 PE=3
SV=,38.06,1e-16,coiled-coil,NULL,CUFF.25450.1
         (356 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g049610.1 | MADS-box transcription factor family protein |...   121   9e-28
Medtr2g049630.1 | MADS-SRF-like domain protein | LC | chr2:21875...   117   1e-26
Medtr2g049530.1 | MADS-box protein AGL84 | LC | chr2:21819458-21...   114   1e-25
Medtr4g045977.1 | MADS-SRF-like domain protein | LC | chr4:15977...   113   3e-25
Medtr4g107170.1 | MADS-box transcription factor family protein |...   111   1e-24
Medtr1g115290.1 | MADS-box protein, putative | LC | chr1:5199979...   106   3e-23
Medtr6g005440.1 | MADS-box transcription factor family protein |...    93   5e-19
Medtr6g018920.1 | MADS-box transcription factor family protein |...    90   4e-18
Medtr1g114730.1 | MADS-box transcription factor family protein |...    84   2e-16
Medtr6g005450.1 | MADS-box transcription factor family protein |...    77   2e-14

>Medtr2g049610.1 | MADS-box transcription factor family protein | LC
           | chr2:21867992-21868711 | 20130731
          Length = 239

 Score =  121 bits (304), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 117/195 (60%), Gaps = 16/195 (8%)

Query: 14  ACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKFDLEEFFEIKKKSV 73
           ACLIVYD DG      + WPQN  VV S+L+ YE +K  +TTP K FD++++F  KK  V
Sbjct: 43  ACLIVYDGDG----RLLTWPQNSIVVQSILKTYELQKI-ETTP-KIFDVKDYFANKKNKV 96

Query: 74  EDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQRVNLLKSMQESEV 133
           E EI+KV KEI+   +PTW P F+++  E+L+  I  LDAKI AC+ ++++LK MQ+   
Sbjct: 97  EGEISKVHKEIVMKMYPTWHPCFMNMDGEQLKTFIGILDAKIQACNHKISMLKKMQQR-- 154

Query: 134 INLSYKANMVEVEDISEPQVISAPISPVID-GMVDSTDQVNGPLDCTNQVIEPVD----- 187
               +  N  ++++++   V+S  + P+ D   +   ++++  +D  NQV++ V      
Sbjct: 155 TENGFMLNTTQMQNVAPKNVVSTHLKPLSDTNRLGEVEELDDFMDWANQVLDNVAYLDDP 214

Query: 188 -SDSGLEEWACKFLE 201
            +  G +EW  +F++
Sbjct: 215 VTKPG-QEWETQFMD 228


>Medtr2g049630.1 | MADS-SRF-like domain protein | LC |
           chr2:21875850-21876962 | 20130731
          Length = 370

 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/174 (41%), Positives = 106/174 (60%), Gaps = 10/174 (5%)

Query: 14  ACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKFDLEEFFEIKKKSV 73
           ACLIVYD  G  D  P+  PQ+ T+V S+LEKYE +K  + TP + FD++++FE KK  +
Sbjct: 45  ACLIVYD--GYGDGRPITTPQDSTIVRSMLEKYEQQKI-EGTPTEIFDVKDYFENKKNKI 101

Query: 74  EDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQRVNLLKSMQESEV 133
           E EI+KV KEI+   +PTW P F+++  E+L+  I  L  KI AC +R+++LK MQES+ 
Sbjct: 102 ESEISKVHKEILMKMYPTWHPCFMNMNGEQLKTFIGILGGKIQACKKRISMLKKMQESD- 160

Query: 134 INLSYKANMVEVED--ISEPQVISAPISPVIDGMVDSTDQVNG-PLDCTNQVIE 184
              S+  N V+  +  +S P V+S   +    G V+  D V   P + T Q+ E
Sbjct: 161 -ETSFTQNTVDPLNSPVSLPPVLSTGTNQF--GEVEKLDDVMAEPRELTGQLGE 211


>Medtr2g049530.1 | MADS-box protein AGL84 | LC |
           chr2:21819458-21818880 | 20130731
          Length = 192

 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 83/119 (69%), Gaps = 3/119 (2%)

Query: 14  ACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKFDLEEFFEIKKKSV 73
           ACLIVYD  G  +  P+  PQ+ T+V S+LE YE +K    T  K FD++++F  KK  +
Sbjct: 45  ACLIVYD--GSGEGRPITMPQDSTIVRSMLENYEQQKIESIT-TKIFDVKDYFANKKNKI 101

Query: 74  EDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQRVNLLKSMQESE 132
           E EI+KV+KEI+  K+PTWDP F+++  E+L+   A ++AKI ACDQR+++LK+M + +
Sbjct: 102 EGEISKVQKEIVKNKYPTWDPCFINMDGEQLKAFTAIVNAKIEACDQRISMLKTMHQGD 160


>Medtr4g045977.1 | MADS-SRF-like domain protein | LC |
           chr4:15977633-15978817 | 20130731
          Length = 394

 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 114/187 (60%), Gaps = 21/187 (11%)

Query: 7   ICDSQSNACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKFDLEEFF 66
           +  + + ACLIVYD DG ++  P+ WP+NP +V+S+L++YE +K  +   +  FD+ ++F
Sbjct: 36  VSKTGARACLIVYDEDG-NNVGPMTWPENPNIVNSMLQEYEHKKIEEAPEI--FDVHKYF 92

Query: 67  EIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQRVNLLK 126
           E +KK+VE +I KV+K+ +  K+PTW   F ++   +LR  IA ++ KI ACD ++++LK
Sbjct: 93  EFRKKNVEAKITKVRKDTLKEKYPTWHQDFQNMEANQLRDFIATVNDKIQACDHKISMLK 152

Query: 127 S-------MQESEVINLSYKANMVEVEDISEPQVISAPISPVIDG---MVDSTDQVNGPL 176
           +       +QES V + S + N++    I  PQ     +   ++G   MVD T+ V+ P 
Sbjct: 153 NNALMQNMVQESVVSSHSRQVNVMHSNSI--PQ-----MQQHVNGTNEMVDLTNHVDLPH 205

Query: 177 D-CTNQV 182
           +  TNQ+
Sbjct: 206 NSSTNQL 212


>Medtr4g107170.1 | MADS-box transcription factor family protein | LC
           | chr4:44259983-44260750 | 20130731
          Length = 255

 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 115/179 (64%), Gaps = 15/179 (8%)

Query: 10  SQSNACLIVYDHDGGDDST--PVIWPQNPTVVHSVLEKYECEKNNKTTPVKKFDLEEFFE 67
           S + AC IVYD   GD +T  P+ WP++   V+S+L++Y+ +K  KT  +  FD++++FE
Sbjct: 39  SGAKACFIVYD---GDHNTVEPMTWPEDLISVNSLLQEYQNQKIEKTPKI--FDVKDYFE 93

Query: 68  IKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQRVNLLKS 127
            KK+ VE +I KV+++II+  +PTW P F +L   +LR  IA ++AKI AC+ ++++LK+
Sbjct: 94  NKKEKVETKINKVRRDIISNIYPTWHPHFSNLDGNQLRDFIATINAKIQACNHKISMLKN 153

Query: 128 MQESEVINLSYKANMVEVEDISEPQVISAPISPV--IDGMVDSTDQVNGPLDCTNQVIE 184
           MQ+ E   L     M++  D+ +      P SP+  ++G+V+  DQV  P D T+++++
Sbjct: 154 MQQIETNTLDI-CEMIDFSDLGD----FPPSSPLNQLNGLVEMNDQVVNP-DYTSEIVD 206


>Medtr1g115290.1 | MADS-box protein, putative | LC |
           chr1:51999791-52000328 | 20130731
          Length = 156

 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 57/129 (44%), Positives = 91/129 (70%), Gaps = 5/129 (3%)

Query: 12  SNACLIVYDHD-GGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKFDLEEFFEIKK 70
           + ACLIVYD D GG+++ P+ WP++ T+V+S+L++Y  +K  + TP K FD+ ++FEIKK
Sbjct: 5   ATACLIVYDGDDGGNNTGPMTWPEDHTMVNSMLQEYVHQKI-ENTP-KIFDVNDYFEIKK 62

Query: 71  KSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQRVNLLKS--M 128
             V+ EI K  K+II++K+PTW    +++   +LR L A +DAKI AC+ ++N+ KS  +
Sbjct: 63  AKVKAEIIKAHKDIIDIKYPTWHQDLVNMEASQLRDLSAVIDAKIQACNHKINMFKSEMV 122

Query: 129 QESEVINLS 137
            E+ V+N S
Sbjct: 123 NENVVLNPS 131


>Medtr6g005440.1 | MADS-box transcription factor family protein | LC
           | chr6:745653-746600 | 20130731
          Length = 315

 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 89/155 (57%), Gaps = 18/155 (11%)

Query: 3   DFSTICDSQSNACLIVY--DHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKF 60
           +FS +CD   + CLI+Y  + +G     P  WP++   V  VL+KY  E      P K +
Sbjct: 34  EFSILCDV--DVCLILYAPNLEGQGYIEPETWPKDKREVQRVLQKY-YETTIDRRP-KTY 89

Query: 61  DLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQ 120
           D++E+F+ + K VE EI KV+KE + +K+PTWD  + S G E+LR  +  LD+K+ ACDQ
Sbjct: 90  DVQEYFKERMKKVELEIYKVRKERLKMKYPTWDESYNSFGNEQLRSFVRFLDSKLDACDQ 149

Query: 121 RVNLLKSMQESEVINLSYKANMVEVEDISEPQVIS 155
           ++N+ K        + SYK N +    IS P + S
Sbjct: 150 KMNMRK--------DESYKVNNL----ISSPYLTS 172


>Medtr6g018920.1 | MADS-box transcription factor family protein | HC
           | chr6:7327877-7326837 | 20130731
          Length = 346

 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 98/162 (60%), Gaps = 11/162 (6%)

Query: 1   MSDFSTICDSQSNACLIVY--DHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVK 58
           +++FS +CD   + C+I+Y  + +      P  WP++   V  +L+KY    +++   + 
Sbjct: 32  VNEFSILCDV--DVCVILYAPNFEAQGFVEPETWPKDKREVQRILQKYYNTTSDRRPKI- 88

Query: 59  KFDLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISAC 118
            +D++E+F+ + K ++ EI+KV+KE I + +P+WD  + SLG E++R   + LD+K+ AC
Sbjct: 89  -YDVQEYFKERMKKIKFEISKVRKEKIKMMYPSWDESYNSLGVEQVRSFASMLDSKLDAC 147

Query: 119 DQRVNLLKS-MQESEVINLSYKANMVEVEDISEPQVISAPIS 159
           +QR+++LK  ++   + + S+K +++    I  P + S P S
Sbjct: 148 NQRMHMLKGDLKGKTIAHESHKVDIL----IGNPNLASKPSS 185


>Medtr1g114730.1 | MADS-box transcription factor family protein | LC
           | chr1:51792967-51791924 | 20130731
          Length = 347

 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 101/175 (57%), Gaps = 12/175 (6%)

Query: 1   MSDFSTICDSQSNACLIVY--DHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVK 58
           +++FS +CD   + C+++Y  +  G   + P  WP++   V  +L+KY    +++   + 
Sbjct: 32  VNEFSILCDV--DVCVVLYAPNFVGRGFAEPETWPKDKRAVERILQKYYNTTSDRRPKI- 88

Query: 59  KFDLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISAC 118
            +D++E+F+ + + +E EI KV+KE + + +PTW+  F SLG E+L    ++L+AK+ AC
Sbjct: 89  -YDVQEYFKERIRKLEFEITKVRKEKLKMMYPTWNESFNSLGAEQLILFASKLEAKLDAC 147

Query: 119 DQRVNLLKS-MQESEVINLSYKANMVEVEDISEPQVISAPISPVIDGMVDSTDQV 172
           +Q+ ++LK  ++   + + S+K + +    IS P +   P S   + M +S  Q 
Sbjct: 148 NQKKHMLKEDLKGKTIAHESHKVDKL----ISTPSLTPNP-SYYFNLMQNSMSQA 197


>Medtr6g005450.1 | MADS-box transcription factor family protein | LC
           | chr6:751556-752599 | 20130731
          Length = 347

 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 76/126 (60%), Gaps = 6/126 (4%)

Query: 3   DFSTICDSQSNACLIVY--DHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKF 60
           + S +CD   +AC+I+Y  + +G     P  WP++   +  +L++Y     ++   +K +
Sbjct: 34  ELSILCDV--DACVILYAPNFEGQGYDEPETWPKDTKELQRILQRYYNTTIDRR--LKTY 89

Query: 61  DLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQ 120
           +++E+F+ + K VE EI+KV+KE   +K+ TWD  F  L  E+LR   + LD K+ AC+ 
Sbjct: 90  NVQEYFKERMKKVEFEISKVRKEKFKMKYQTWDESFNFLEDEQLRLFASILDFKLDACNL 149

Query: 121 RVNLLK 126
           ++N+LK
Sbjct: 150 KMNMLK 155