Miyakogusa Predicted Gene
- Lj1g3v0268770.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0268770.1 tr|G7KHI2|G7KHI2_MEDTR MADS-box transcription
factor OS=Medicago truncatula GN=MTR_6g005440 PE=3
SV=,38.06,1e-16,coiled-coil,NULL,CUFF.25450.1
(356 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g049610.1 | MADS-box transcription factor family protein |... 121 9e-28
Medtr2g049630.1 | MADS-SRF-like domain protein | LC | chr2:21875... 117 1e-26
Medtr2g049530.1 | MADS-box protein AGL84 | LC | chr2:21819458-21... 114 1e-25
Medtr4g045977.1 | MADS-SRF-like domain protein | LC | chr4:15977... 113 3e-25
Medtr4g107170.1 | MADS-box transcription factor family protein |... 111 1e-24
Medtr1g115290.1 | MADS-box protein, putative | LC | chr1:5199979... 106 3e-23
Medtr6g005440.1 | MADS-box transcription factor family protein |... 93 5e-19
Medtr6g018920.1 | MADS-box transcription factor family protein |... 90 4e-18
Medtr1g114730.1 | MADS-box transcription factor family protein |... 84 2e-16
Medtr6g005450.1 | MADS-box transcription factor family protein |... 77 2e-14
>Medtr2g049610.1 | MADS-box transcription factor family protein | LC
| chr2:21867992-21868711 | 20130731
Length = 239
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 117/195 (60%), Gaps = 16/195 (8%)
Query: 14 ACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKFDLEEFFEIKKKSV 73
ACLIVYD DG + WPQN VV S+L+ YE +K +TTP K FD++++F KK V
Sbjct: 43 ACLIVYDGDG----RLLTWPQNSIVVQSILKTYELQKI-ETTP-KIFDVKDYFANKKNKV 96
Query: 74 EDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQRVNLLKSMQESEV 133
E EI+KV KEI+ +PTW P F+++ E+L+ I LDAKI AC+ ++++LK MQ+
Sbjct: 97 EGEISKVHKEIVMKMYPTWHPCFMNMDGEQLKTFIGILDAKIQACNHKISMLKKMQQR-- 154
Query: 134 INLSYKANMVEVEDISEPQVISAPISPVID-GMVDSTDQVNGPLDCTNQVIEPVD----- 187
+ N ++++++ V+S + P+ D + ++++ +D NQV++ V
Sbjct: 155 TENGFMLNTTQMQNVAPKNVVSTHLKPLSDTNRLGEVEELDDFMDWANQVLDNVAYLDDP 214
Query: 188 -SDSGLEEWACKFLE 201
+ G +EW +F++
Sbjct: 215 VTKPG-QEWETQFMD 228
>Medtr2g049630.1 | MADS-SRF-like domain protein | LC |
chr2:21875850-21876962 | 20130731
Length = 370
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 106/174 (60%), Gaps = 10/174 (5%)
Query: 14 ACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKFDLEEFFEIKKKSV 73
ACLIVYD G D P+ PQ+ T+V S+LEKYE +K + TP + FD++++FE KK +
Sbjct: 45 ACLIVYD--GYGDGRPITTPQDSTIVRSMLEKYEQQKI-EGTPTEIFDVKDYFENKKNKI 101
Query: 74 EDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQRVNLLKSMQESEV 133
E EI+KV KEI+ +PTW P F+++ E+L+ I L KI AC +R+++LK MQES+
Sbjct: 102 ESEISKVHKEILMKMYPTWHPCFMNMNGEQLKTFIGILGGKIQACKKRISMLKKMQESD- 160
Query: 134 INLSYKANMVEVED--ISEPQVISAPISPVIDGMVDSTDQVNG-PLDCTNQVIE 184
S+ N V+ + +S P V+S + G V+ D V P + T Q+ E
Sbjct: 161 -ETSFTQNTVDPLNSPVSLPPVLSTGTNQF--GEVEKLDDVMAEPRELTGQLGE 211
>Medtr2g049530.1 | MADS-box protein AGL84 | LC |
chr2:21819458-21818880 | 20130731
Length = 192
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 83/119 (69%), Gaps = 3/119 (2%)
Query: 14 ACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKFDLEEFFEIKKKSV 73
ACLIVYD G + P+ PQ+ T+V S+LE YE +K T K FD++++F KK +
Sbjct: 45 ACLIVYD--GSGEGRPITMPQDSTIVRSMLENYEQQKIESIT-TKIFDVKDYFANKKNKI 101
Query: 74 EDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQRVNLLKSMQESE 132
E EI+KV+KEI+ K+PTWDP F+++ E+L+ A ++AKI ACDQR+++LK+M + +
Sbjct: 102 EGEISKVQKEIVKNKYPTWDPCFINMDGEQLKAFTAIVNAKIEACDQRISMLKTMHQGD 160
>Medtr4g045977.1 | MADS-SRF-like domain protein | LC |
chr4:15977633-15978817 | 20130731
Length = 394
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 114/187 (60%), Gaps = 21/187 (11%)
Query: 7 ICDSQSNACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKFDLEEFF 66
+ + + ACLIVYD DG ++ P+ WP+NP +V+S+L++YE +K + + FD+ ++F
Sbjct: 36 VSKTGARACLIVYDEDG-NNVGPMTWPENPNIVNSMLQEYEHKKIEEAPEI--FDVHKYF 92
Query: 67 EIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQRVNLLK 126
E +KK+VE +I KV+K+ + K+PTW F ++ +LR IA ++ KI ACD ++++LK
Sbjct: 93 EFRKKNVEAKITKVRKDTLKEKYPTWHQDFQNMEANQLRDFIATVNDKIQACDHKISMLK 152
Query: 127 S-------MQESEVINLSYKANMVEVEDISEPQVISAPISPVIDG---MVDSTDQVNGPL 176
+ +QES V + S + N++ I PQ + ++G MVD T+ V+ P
Sbjct: 153 NNALMQNMVQESVVSSHSRQVNVMHSNSI--PQ-----MQQHVNGTNEMVDLTNHVDLPH 205
Query: 177 D-CTNQV 182
+ TNQ+
Sbjct: 206 NSSTNQL 212
>Medtr4g107170.1 | MADS-box transcription factor family protein | LC
| chr4:44259983-44260750 | 20130731
Length = 255
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 115/179 (64%), Gaps = 15/179 (8%)
Query: 10 SQSNACLIVYDHDGGDDST--PVIWPQNPTVVHSVLEKYECEKNNKTTPVKKFDLEEFFE 67
S + AC IVYD GD +T P+ WP++ V+S+L++Y+ +K KT + FD++++FE
Sbjct: 39 SGAKACFIVYD---GDHNTVEPMTWPEDLISVNSLLQEYQNQKIEKTPKI--FDVKDYFE 93
Query: 68 IKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQRVNLLKS 127
KK+ VE +I KV+++II+ +PTW P F +L +LR IA ++AKI AC+ ++++LK+
Sbjct: 94 NKKEKVETKINKVRRDIISNIYPTWHPHFSNLDGNQLRDFIATINAKIQACNHKISMLKN 153
Query: 128 MQESEVINLSYKANMVEVEDISEPQVISAPISPV--IDGMVDSTDQVNGPLDCTNQVIE 184
MQ+ E L M++ D+ + P SP+ ++G+V+ DQV P D T+++++
Sbjct: 154 MQQIETNTLDI-CEMIDFSDLGD----FPPSSPLNQLNGLVEMNDQVVNP-DYTSEIVD 206
>Medtr1g115290.1 | MADS-box protein, putative | LC |
chr1:51999791-52000328 | 20130731
Length = 156
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 91/129 (70%), Gaps = 5/129 (3%)
Query: 12 SNACLIVYDHD-GGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKFDLEEFFEIKK 70
+ ACLIVYD D GG+++ P+ WP++ T+V+S+L++Y +K + TP K FD+ ++FEIKK
Sbjct: 5 ATACLIVYDGDDGGNNTGPMTWPEDHTMVNSMLQEYVHQKI-ENTP-KIFDVNDYFEIKK 62
Query: 71 KSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQRVNLLKS--M 128
V+ EI K K+II++K+PTW +++ +LR L A +DAKI AC+ ++N+ KS +
Sbjct: 63 AKVKAEIIKAHKDIIDIKYPTWHQDLVNMEASQLRDLSAVIDAKIQACNHKINMFKSEMV 122
Query: 129 QESEVINLS 137
E+ V+N S
Sbjct: 123 NENVVLNPS 131
>Medtr6g005440.1 | MADS-box transcription factor family protein | LC
| chr6:745653-746600 | 20130731
Length = 315
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 89/155 (57%), Gaps = 18/155 (11%)
Query: 3 DFSTICDSQSNACLIVY--DHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKF 60
+FS +CD + CLI+Y + +G P WP++ V VL+KY E P K +
Sbjct: 34 EFSILCDV--DVCLILYAPNLEGQGYIEPETWPKDKREVQRVLQKY-YETTIDRRP-KTY 89
Query: 61 DLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQ 120
D++E+F+ + K VE EI KV+KE + +K+PTWD + S G E+LR + LD+K+ ACDQ
Sbjct: 90 DVQEYFKERMKKVELEIYKVRKERLKMKYPTWDESYNSFGNEQLRSFVRFLDSKLDACDQ 149
Query: 121 RVNLLKSMQESEVINLSYKANMVEVEDISEPQVIS 155
++N+ K + SYK N + IS P + S
Sbjct: 150 KMNMRK--------DESYKVNNL----ISSPYLTS 172
>Medtr6g018920.1 | MADS-box transcription factor family protein | HC
| chr6:7327877-7326837 | 20130731
Length = 346
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 98/162 (60%), Gaps = 11/162 (6%)
Query: 1 MSDFSTICDSQSNACLIVY--DHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVK 58
+++FS +CD + C+I+Y + + P WP++ V +L+KY +++ +
Sbjct: 32 VNEFSILCDV--DVCVILYAPNFEAQGFVEPETWPKDKREVQRILQKYYNTTSDRRPKI- 88
Query: 59 KFDLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISAC 118
+D++E+F+ + K ++ EI+KV+KE I + +P+WD + SLG E++R + LD+K+ AC
Sbjct: 89 -YDVQEYFKERMKKIKFEISKVRKEKIKMMYPSWDESYNSLGVEQVRSFASMLDSKLDAC 147
Query: 119 DQRVNLLKS-MQESEVINLSYKANMVEVEDISEPQVISAPIS 159
+QR+++LK ++ + + S+K +++ I P + S P S
Sbjct: 148 NQRMHMLKGDLKGKTIAHESHKVDIL----IGNPNLASKPSS 185
>Medtr1g114730.1 | MADS-box transcription factor family protein | LC
| chr1:51792967-51791924 | 20130731
Length = 347
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 101/175 (57%), Gaps = 12/175 (6%)
Query: 1 MSDFSTICDSQSNACLIVY--DHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVK 58
+++FS +CD + C+++Y + G + P WP++ V +L+KY +++ +
Sbjct: 32 VNEFSILCDV--DVCVVLYAPNFVGRGFAEPETWPKDKRAVERILQKYYNTTSDRRPKI- 88
Query: 59 KFDLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISAC 118
+D++E+F+ + + +E EI KV+KE + + +PTW+ F SLG E+L ++L+AK+ AC
Sbjct: 89 -YDVQEYFKERIRKLEFEITKVRKEKLKMMYPTWNESFNSLGAEQLILFASKLEAKLDAC 147
Query: 119 DQRVNLLKS-MQESEVINLSYKANMVEVEDISEPQVISAPISPVIDGMVDSTDQV 172
+Q+ ++LK ++ + + S+K + + IS P + P S + M +S Q
Sbjct: 148 NQKKHMLKEDLKGKTIAHESHKVDKL----ISTPSLTPNP-SYYFNLMQNSMSQA 197
>Medtr6g005450.1 | MADS-box transcription factor family protein | LC
| chr6:751556-752599 | 20130731
Length = 347
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 3 DFSTICDSQSNACLIVY--DHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKF 60
+ S +CD +AC+I+Y + +G P WP++ + +L++Y ++ +K +
Sbjct: 34 ELSILCDV--DACVILYAPNFEGQGYDEPETWPKDTKELQRILQRYYNTTIDRR--LKTY 89
Query: 61 DLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQ 120
+++E+F+ + K VE EI+KV+KE +K+ TWD F L E+LR + LD K+ AC+
Sbjct: 90 NVQEYFKERMKKVEFEISKVRKEKFKMKYQTWDESFNFLEDEQLRLFASILDFKLDACNL 149
Query: 121 RVNLLK 126
++N+LK
Sbjct: 150 KMNMLK 155