Miyakogusa Predicted Gene
- Lj1g3v0268490.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0268490.1 Non Characterized Hit- tr|I3M3B5|I3M3B5_SPETR
Uncharacterized protein OS=Spermophilus
tridecemlineat,35.35,0.000000000008,FYVE/PHD zinc finger,Zinc finger,
FYVE/PHD-type; ZF_PHD_2,Zinc finger, PHD-finger; ZF_RING_2,Zinc
fi,CUFF.25438.1
(649 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g088665.1 | PHD-finger protein | LC | chr3:40402136-404074... 537 e-152
Medtr6g007650.1 | methyl-CpG-binding domain protein | HC | chr6:... 72 2e-12
Medtr1g007670.1 | histone-lysine N-methyltransferase ATXR6-like ... 56 1e-07
Medtr4g037745.1 | RING/FYVE/PHD zinc finger protein, putative | ... 55 3e-07
Medtr5g010300.4 | transcription factor jumonji (JmjC) domain pro... 53 1e-06
Medtr5g010300.2 | transcription factor jumonji (JmjC) domain pro... 52 1e-06
Medtr5g010300.1 | transcription factor jumonji (JmjC) domain pro... 52 1e-06
Medtr5g010300.3 | transcription factor jumonji (JmjC) domain pro... 52 1e-06
Medtr3g095830.1 | histone-lysine N-methyltransferase ATXR5 | HC ... 51 3e-06
Medtr1g007700.1 | histone-lysine N-methyltransferase ATXR6, puta... 51 4e-06
>Medtr3g088665.1 | PHD-finger protein | LC | chr3:40402136-40407486
| 20130731
Length = 800
Score = 537 bits (1384), Expect = e-152, Method: Compositional matrix adjust.
Identities = 316/658 (48%), Positives = 396/658 (60%), Gaps = 81/658 (12%)
Query: 49 NEAVNNGVAIGGGDDVAEGGKIQGLKNESVNNEVTMEDADGVAEGEEVRCLEEGTVGNGV 108
+EAVN+G G+ V E ++ LK+E VN+ V + +GVAE V L+ + NGV
Sbjct: 163 SEAVNDGAVFSNGNGVNE--EVGVLKSEDVNDGVVFSNGNGVAEVPVV--LKSDVLNNGV 218
Query: 109 AIGSGDDVAEGGKTQGLKNESVNNGVAIADGNGVAEGEE----------VRCLKE----- 153
+G+ V E LK+E+V+ NGVA V CL+
Sbjct: 219 ---NGNGVTEEAGV--LKSEAVS--------NGVASSGGFDSGDGGSGGVTCLRTYKRRK 265
Query: 154 ---------------GTVDNGMAVADRFGSSERDS--------------GGVECLRTYKR 184
V+N +AD+ D+ G V + Y
Sbjct: 266 YDKSSSKGKAQEDCGKCVENASHIADQVVKEPLDATLGNTADDCAHRHWGNVVLKQLY-- 323
Query: 185 RKRGKSSSEIKVQEGSGE-DAETINQLSGQKAFKIVEDGQQCSSQFELSSHRLQSKANGH 243
+ G S+ IK G ++ Q KI +DGQ+ SSQF+ SHR +++ NGH
Sbjct: 324 QSLGNSNGGIKGCIGEALIRHQSCATTVMQGTSKIGKDGQEFSSQFDRLSHRTRAEDNGH 383
Query: 244 ANVMCNGFSSESDGRGVTERCQHVFRNILASEKFSSLSKVLLENFQGMKPESVFDFSVIN 303
ANVM NG SSE G GVTE CQ V N+L S+KF+SL K+L +NFQ KPESVFDFSVI
Sbjct: 384 ANVMQNGSSSEPHGHGVTEMCQRVLCNLLTSDKFNSLCKILFDNFQATKPESVFDFSVIT 443
Query: 304 SRMKEQAYDQSPTLFLLDIQQVWMKLQNTGNKIVAIAKSLSNMSKTSYY----------- 352
RMK++ Y+QSP LFL DIQQV+ KLQ+T +IVA++ SLSN+S SY
Sbjct: 444 LRMKQKVYEQSPELFLSDIQQVFGKLQDTFKEIVALSNSLSNISTDSYSKLVGISAQSTS 503
Query: 353 EQFSNWESNSHMKQEQTEECATYKICTCRHCGEKADGTDCLVCDSCEEMYHVSCIEPAVK 412
E E +SHMK EQTEECA C CGE+ADGTDCLVCDSCE++YH+SCIE AV
Sbjct: 504 EDEKQAELDSHMKPEQTEECAG-----CSSCGERADGTDCLVCDSCEKVYHLSCIELAVN 558
Query: 413 EIPHKSWFCAHCTASGIGSPHEDCVVCERLNVPKTLNNIVGEESFHAXXXXXXXXXXXXX 472
EIPHKSW+CA+CT SG GSPHE+CVVC RLN K I+G+ES
Sbjct: 559 EIPHKSWYCANCTTSGFGSPHENCVVCARLNDTKMPKKIIGDESLPTNEETLDEFDDDSN 618
Query: 473 CSYDGIQVSKGGTNSSHCKICGQE-VDGEKIKICGHSFCSSKYYHVRCLSGKQIKSYGRC 531
YDGIQ+ GG + CK+CG + + GEKI+ICGH FC SKYYH RCL+ KQ+ SYG
Sbjct: 619 DCYDGIQIWTGGKETLSCKVCGNKAIKGEKIRICGHPFCPSKYYHARCLTSKQLNSYGYW 678
Query: 532 WYCPSCLCQVCFADRDDDKIVRCDGCDHAYHIYCMEPPQNSIPRGKWFCRSCDAGIQAIR 591
WYCPSC+CQVC D+DD +IV CDGCDHAYHIYCM+PP +SIP+GKWFCR CDAGI+AI
Sbjct: 679 WYCPSCICQVCLTDQDDSRIVLCDGCDHAYHIYCMKPPLDSIPQGKWFCRKCDAGIKAIS 738
Query: 592 EARKAYETNNSRSDENVSKLNDDKKWNNKQGKELDKVGGMDMLLTAANTLKFEEGHTD 649
+A+KAYE+N R+ E VSK N + NNK +EL+ GGMDMLLTAAN+L FEE T+
Sbjct: 739 QAKKAYESNQLRTGETVSKPNANNNCNNKFVEELESCGGMDMLLTAANSLNFEENLTE 796
>Medtr6g007650.1 | methyl-CpG-binding domain protein | HC |
chr6:1748720-1735614 | 20130731
Length = 2161
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 538 LCQVCFADRDDDKIVRCDGCDHAYHIYCMEPPQNSIPRGKWFCRSCDAGIQAIRE-ARKA 596
+C++C DRDDD ++ CD CD YH YC+ PP IP G W+C SC G A ++ +A
Sbjct: 1245 VCKICGIDRDDDSVLLCDTCDAEYHKYCLNPPLARIPEGNWYCPSCIGGKHATQDLTERA 1304
Query: 597 YETNNSRSDENVSKLN 612
T RS + ++N
Sbjct: 1305 QLTGKRRSKKFQGQVN 1320
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 297 FDFSVINSRMKEQAYDQSPTLFLLDIQQVWMK----------LQNTGNKIVAIAKSLSNM 346
DF I+ R+ AY S FL D++++W L K+ +SL N
Sbjct: 1141 LDFRTIDLRLASGAYGGSHEAFLEDVRELWSNVRVAFGDQPDLVELSEKLSQNFESLYNE 1200
Query: 347 SKTSYYEQFSNWES----NSHMKQEQTEECAT--------YKICTCRHCGEKADGTDCLV 394
+Y ++F+++ N+ MK+E A+ + C+ CG D L+
Sbjct: 1201 EVVTYVQKFTDYAEVGCINAEMKKEVQAFIASSNEIPKAPWDEGVCKICGIDRDDDSVLL 1260
Query: 395 CDSCEEMYHVSCIEPAVKEIPHKSWFCAHCTASGIGSPHEDCVVCER 441
CD+C+ YH C+ P + IP +W+C C IG H + ER
Sbjct: 1261 CDTCDAEYHKYCLNPPLARIPEGNWYCPSC----IGGKHATQDLTER 1303
>Medtr1g007670.1 | histone-lysine N-methyltransferase ATXR6-like
protein | HC | chr1:488273-491588 | 20130731
Length = 342
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 538 LCQVCFADRDDDKIVRCDGCDHAYHIYCMEPPQNSIPRGKWFCRSC 583
+CQ C + + K++ CD CD+ YH++C+ P S+P+ WFC SC
Sbjct: 28 VCQKCNSGKSPTKLLLCDNCDNGYHLFCLTPILPSVPKSSWFCPSC 73
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 379 TCRHCGEKADGTDCLVCDSCEEMYHVSCIEPAVKEIPHKSWFCAHCT 425
C+ C T L+CD+C+ YH+ C+ P + +P SWFC C+
Sbjct: 28 VCQKCNSGKSPTKLLLCDNCDNGYHLFCLTPILPSVPKSSWFCPSCS 74
>Medtr4g037745.1 | RING/FYVE/PHD zinc finger protein, putative | HC
| chr4:13937670-13946485 | 20130731
Length = 870
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 512 SKYYHVRCL---SGKQIKSYGRCWYCPSC-LCQVCFADRDDDKIVRCDGCDHAYHIYCME 567
SK YH CL S + + W C +C +C+ C D K + C CD AYH YC++
Sbjct: 167 SKKYHRSCLKSWSNNRDLFHWSSWTCRACRICEACRRTGDPSKFMFCKRCDGAYHCYCLQ 226
Query: 568 PPQNSIPRGKWFC 580
PP ++ G + C
Sbjct: 227 PPHKNVSTGPYLC 239
>Medtr5g010300.4 | transcription factor jumonji (JmjC) domain
protein | HC | chr5:2711113-2732094 | 20130731
Length = 1586
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 538 LCQVCFADRDDDKIVRCDGCDHAYHIYCMEPPQNSIPRGKWFCRSC 583
+C+ C + + ++ CD CD +HIYC+ PP IP G W+C +C
Sbjct: 244 ICEQCKSGLHGEVMLLCDRCDKGWHIYCLSPPLKQIPLGNWYCFNC 289
>Medtr5g010300.2 | transcription factor jumonji (JmjC) domain
protein | HC | chr5:2711113-2732094 | 20130731
Length = 1590
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 538 LCQVCFADRDDDKIVRCDGCDHAYHIYCMEPPQNSIPRGKWFCRSC 583
+C+ C + + ++ CD CD +HIYC+ PP IP G W+C +C
Sbjct: 244 ICEQCKSGLHGEVMLLCDRCDKGWHIYCLSPPLKQIPLGNWYCFNC 289
>Medtr5g010300.1 | transcription factor jumonji (JmjC) domain
protein | HC | chr5:2711113-2733852 | 20130731
Length = 1832
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 538 LCQVCFADRDDDKIVRCDGCDHAYHIYCMEPPQNSIPRGKWFCRSC 583
+C+ C + + ++ CD CD +HIYC+ PP IP G W+C +C
Sbjct: 244 ICEQCKSGLHGEVMLLCDRCDKGWHIYCLSPPLKQIPLGNWYCFNC 289
>Medtr5g010300.3 | transcription factor jumonji (JmjC) domain
protein | HC | chr5:2711113-2733813 | 20130731
Length = 1774
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 538 LCQVCFADRDDDKIVRCDGCDHAYHIYCMEPPQNSIPRGKWFCRSC 583
+C+ C + + ++ CD CD +HIYC+ PP IP G W+C +C
Sbjct: 244 ICEQCKSGLHGEVMLLCDRCDKGWHIYCLSPPLKQIPLGNWYCFNC 289
>Medtr3g095830.1 | histone-lysine N-methyltransferase ATXR5 | HC |
chr3:43794136-43794489 | 20130731
Length = 117
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 341 KSLSNMSKTSYYEQFSNWESNSHMKQEQTEECATYKICTCRHCGEKADGTDCLVCDSCEE 400
K + S+ Y +N + + + E+ Y C C CG + L+CD C++
Sbjct: 27 KPTDSSSRVKKYRTMANIMARAKYAVVEKED---YSDCMCERCGSGEQPEELLLCDKCDK 83
Query: 401 MYHVSCIEPAVKEIPHKSWFCAHC 424
+H+ C+ P + +P SW C C
Sbjct: 84 GFHMKCLRPILARVPIGSWICPKC 107
>Medtr1g007700.1 | histone-lysine N-methyltransferase ATXR6,
putative | LC | chr1:498003-503498 | 20130731
Length = 545
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 538 LCQVCFADRDDDKIVRCDGCDHAYHIYCMEPPQNSIPRGKWFCRSC--DAGIQAIREARK 595
+CQ C + + K++ CD C+ YH++C+ S+P+ WFC SC + + +R+ RK
Sbjct: 260 VCQKCNSGKSPTKLLLCDNCNKGYHLFCL----TSVPKSSWFCPSCSHNTNTKYVRKKRK 315
Query: 596 AYETNNSRSDENVSKLNDDKKWN 618
R VS KKWN
Sbjct: 316 -------RGSRWVS---SKKKWN 328