Miyakogusa Predicted Gene
- Lj1g3v0246860.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0246860.1 tr|G7KNH7|G7KNH7_MEDTR DNA mismatch repair
protein Msh6-2 OS=Medicago truncatula GN=MTR_6g086270
PE=,78.31,0,MutS_V,DNA mismatch repair protein MutS, C-terminal;
MutS_III,DNA mismatch repair protein MutS,
core,NODE_22791_length_3213_cov_8.453159.path2.1
(1006 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g086270.1 | DNA mismatch repair protein msh6 | HC | chr6:3... 1635 0.0
Medtr7g109470.1 | DNA mismatch repair MSH3-like protein | HC | c... 253 6e-67
Medtr4g111945.1 | DNA mismatch repair MSH3-like protein | HC | c... 186 1e-46
Medtr1g100683.2 | DNA mismatch repair MSH3-like protein | HC | c... 159 2e-38
Medtr1g100683.1 | DNA mismatch repair MSH3-like protein | HC | c... 159 2e-38
Medtr5g093110.1 | DNA mismatch repair protein MutS | HC | chr5:4... 99 2e-20
Medtr1g045670.1 | DNA mismatch repair protein | HC | chr1:171673... 96 2e-19
Medtr5g068600.7 | DNA mismatch repair MUTS family protein | HC |... 81 6e-15
Medtr5g068600.6 | DNA mismatch repair MUTS family protein | HC |... 80 8e-15
Medtr5g068600.5 | DNA mismatch repair MUTS family protein | HC |... 80 8e-15
Medtr5g068600.2 | DNA mismatch repair MUTS family protein | HC |... 80 8e-15
Medtr5g068600.1 | DNA mismatch repair MUTS family protein | HC |... 80 8e-15
Medtr5g068600.4 | DNA mismatch repair MUTS family protein | HC |... 80 8e-15
Medtr5g068600.3 | DNA mismatch repair MUTS family protein | HC |... 80 8e-15
Medtr4g088920.1 | DNA mismatch repair protein MutS2 | HC | chr4:... 77 1e-13
>Medtr6g086270.1 | DNA mismatch repair protein msh6 | HC |
chr6:32387897-32378956 | 20130731
Length = 1155
Score = 1635 bits (4234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 817/1067 (76%), Positives = 885/1067 (82%), Gaps = 61/1067 (5%)
Query: 1 MHKFVKVDDTVNVSQRSHSSN-DSFPKPS-LSGISIDTNSKGLQKE-ESAFEPLVKVKDN 57
MHKF+KVDD V+QRS SSN DSFPKPS S I DTN KGLQKE +AFEPLVK KDN
Sbjct: 89 MHKFIKVDDGEKVNQRSQSSNPDSFPKPSPSSNIFTDTNRKGLQKEVAAAFEPLVKAKDN 148
Query: 58 AFSFKEK------------------------------------RNLEKVAPVEIIEDD-- 79
A +FKEK R+ PV +D+
Sbjct: 149 AVNFKEKVSHDNTFRSQSSNHDSFPRPSPPSSIFTNTNRKGLQRDAAAFEPVVKAKDNAV 208
Query: 80 -------------------ITGPETPGMQPLASHAKRTREEGSKFCSLRDSGKRVRFLED 120
ITGPETPGMQPL S+ KR E+ SK SLRDSGKRVRFL+D
Sbjct: 209 NFKQKVNSGNTFLFENDDDITGPETPGMQPLTSNVKRKVEDVSKLSSLRDSGKRVRFLDD 268
Query: 121 LNALDMTKKEAEVASKFEWLYPSLILDASGRRPGDPLYDKTTLYVPPEVMKKMSASQKQY 180
+LDMTKKE E+ASKFEWL PS I DA+GRRP DPLYD+TTLY+PPEV++KM+ASQKQY
Sbjct: 269 SISLDMTKKELEIASKFEWLDPSRIRDANGRRPDDPLYDRTTLYIPPEVLRKMTASQKQY 328
Query: 181 WSIKCKYMDVVLFFKVGKFYELYEVDADIGHKELYWKITISGVGKCRQVGISESGIYFAV 240
WS+KCKYMDV+LFFKVGKFYELYE+DA+IGHKEL WKIT+SGVGKCRQVGISESGI AV
Sbjct: 329 WSVKCKYMDVLLFFKVGKFYELYEMDAEIGHKELDWKITLSGVGKCRQVGISESGIDDAV 388
Query: 241 QSLVARGYKVGRVEQLETSEEAKARGANSVILRKLVQVVTPSTAVDGNIGPDATHLLAIK 300
++LVARGYKVGRVEQLETSEEAKARGANSVI RKLVQVVTPST VDGNIGPDA HLLAIK
Sbjct: 389 KNLVARGYKVGRVEQLETSEEAKARGANSVIQRKLVQVVTPSTNVDGNIGPDANHLLAIK 448
Query: 301 EGNHGSDDGSVVYGFAFVDCARLRFWVGSIDDDASCSALGALLMQVSPKEVIYESRGLSK 360
E ++GSD+GSV YGFAFVDCARLR WVGSIDDDASCSALGALLMQVSPKE+IYE RG+SK
Sbjct: 449 EESNGSDNGSVTYGFAFVDCARLRLWVGSIDDDASCSALGALLMQVSPKEIIYERRGVSK 508
Query: 361 EAQKALRKFSGNGSTTL-LTPVQSINDLVNTEINDLILSKGYFKGSSDPLDHVMSKVIHR 419
EA+KA RKFS NGSTTL LTP++SI DLV +EI+DLI SKGYFKGSS+ LDHV++ VIH
Sbjct: 509 EAEKAFRKFSLNGSTTLQLTPMRSITDLVTSEISDLIHSKGYFKGSSNSLDHVLTNVIHC 568
Query: 420 EITLSALGGLIGHLDRLMLDDILQNGDLYPYQVYKACLKMDGPTLINLEIFSNSDDGGKS 479
EITLSALGGLIGHL+RLMLD++LQNGD+YPYQVYK CLKMDGPT INLEIF NS+DGGK+
Sbjct: 569 EITLSALGGLIGHLNRLMLDEVLQNGDIYPYQVYKGCLKMDGPTYINLEIFGNSNDGGKA 628
Query: 480 GTLYKYLDNCVTSPGKRLLRNWICCPLKDGEGINNRLDVVDNLIACPEIVSHIAQHLRKL 539
GTLYKYLDNCVTS GKRLLRNWICCPLKD EGINNRLDVVD+LIA P IVSHIAQHLRKL
Sbjct: 629 GTLYKYLDNCVTSSGKRLLRNWICCPLKDAEGINNRLDVVDHLIASPVIVSHIAQHLRKL 688
Query: 540 PDLELLLGRIKSTXXXXXXXXXXXXXXXXXXXRVKVFGSLVKGLRTAXXXXXXXQKEQPL 599
PDLELLLGR KS+ RVKVFGSLVKGLRT QKEQPL
Sbjct: 689 PDLELLLGRTKSSLKVSSPILLPLLVKKILKQRVKVFGSLVKGLRTTLSLLLILQKEQPL 748
Query: 600 ISSLNKVFKLPILTGINGLDKFLTQFEAAVDSDFPNYLNHNVTDSDAXXXXXXXXXXXXK 659
ISSL KVFKLP+LTG +GLD+FLTQFEAAVDSDFPNY NH+VTD+DA K
Sbjct: 749 ISSLTKVFKLPVLTGSDGLDQFLTQFEAAVDSDFPNYQNHDVTDTDAETLTILAELFLEK 808
Query: 660 AAQWFEVVNAINCIDVLRSFAMASSFSCGTMSRPVIVPRSECTSKDSGGPVLKMKGLWHP 719
A QWFEVV+AINCIDVLRSFA+ SSFSCGTMSRPVIVP S+ TSKDSG PVLKMKGLWHP
Sbjct: 809 ANQWFEVVHAINCIDVLRSFAVTSSFSCGTMSRPVIVPTSKSTSKDSGAPVLKMKGLWHP 868
Query: 720 FALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYVP 779
FALGE+G PVPND+ILGENE HP TLLLTGPNMGGKSTLLRATCLAVIMAQLGCYVP
Sbjct: 869 FALGETGREPVPNDMILGENEGGHHPRTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYVP 928
Query: 780 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 839
CENCV+SVVDIIFTRLGATDRIMAGESTFFIECTETASVL NATQDSLVILDELGRGTST
Sbjct: 929 CENCVLSVVDIIFTRLGATDRIMAGESTFFIECTETASVLHNATQDSLVILDELGRGTST 988
Query: 840 FDGYAIAYAVFRHLIEKVNCLLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKR 899
FDGYAIAYAVFRHLIEKVNC LLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSK+
Sbjct: 989 FDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKQ 1048
Query: 900 DQELVFLYRLASGACPESYGLQVALMAGIPEKTVNIASKASQQMKKSIGRTFRSSELRSE 959
DQELVFLYRLA GACPESYGLQVALMAGIPEKTVN+ASKASQQMK SIG+ FRSSE RSE
Sbjct: 1049 DQELVFLYRLAPGACPESYGLQVALMAGIPEKTVNVASKASQQMKISIGKNFRSSEQRSE 1108
Query: 960 FSTLHEEWLKTLMSISRMEDGKSFDEDVLDTLICLWYELKTSFRSGN 1006
FS+LHEEWLKTLMSI+R+ED +SFD+DVLDTL+CL YELK+SF+SGN
Sbjct: 1109 FSSLHEEWLKTLMSIARIEDVESFDDDVLDTLVCLRYELKSSFKSGN 1155
>Medtr7g109470.1 | DNA mismatch repair MSH3-like protein | HC |
chr7:44767037-44759016 | 20130731
Length = 1280
Score = 253 bits (647), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 141/315 (44%), Positives = 198/315 (62%), Gaps = 23/315 (7%)
Query: 662 QWFEVVNAINCIDVLRSFAMASSFSCGTMSRPVIVPRSECTSKDSGGPVLKMKGLWHPF- 720
QW ++V+A +DVL + A+AS + G RP V + CT++ P + K L HP
Sbjct: 947 QWKQLVSATAELDVLINLAIASDYYEGPTCRPSFVG-TLCTNE---APYIYAKSLGHPVL 1002
Query: 721 ---ALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCY 777
LG+S VPNDI +G + +LLTGPNMGGKSTLLR CLAVI+AQ+G
Sbjct: 1003 RSDTLGKSAF--VPNDITIGGPD---QASFILLTGPNMGGKSTLLRQVCLAVILAQVGAD 1057
Query: 778 VPCENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGT 837
VP E+ +S VD IF R+GA D IMAG+STF E +ETA++L +AT++SLV LDELGRGT
Sbjct: 1058 VPSESFELSPVDRIFVRMGARDNIMAGQSTFLTELSETATMLSSATRNSLVALDELGRGT 1117
Query: 838 STFDGYAIAYAVFRHLIEKVNCLLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLS 897
ST DG AIA +V HL+ V C LF+THYH L ++ P+V + HMAC S ++ L
Sbjct: 1118 STSDGQAIAESVLEHLVRSVQCRGLFSTHYHRLAIDYLKDPKVCLAHMACQVGSGNEGL- 1176
Query: 898 KRDQELVFLYRLASGACPESYGLQVALMAGIPEKTVNIASKASQQMKKSIGRTFRSSELR 957
E+ FLYRL++GACP+SYG+ VA +AG+P + A S++ + + G+ R
Sbjct: 1177 ---DEVTFLYRLSAGACPKSYGVNVARLAGLPTSVLQKADAKSREFEATYGK------YR 1227
Query: 958 SEFSTLHEEWLKTLM 972
+E ++ ++ W+ ++
Sbjct: 1228 TEPNSSNQSWVDEII 1242
Score = 235 bits (599), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 155/429 (36%), Positives = 223/429 (51%), Gaps = 33/429 (7%)
Query: 153 PGDPLYDKTTLYVPPEVMKKMSASQKQYWSIKCKYMDVVLFFKVGKFYELYEVDADIGHK 212
PGD YD TLY+PP+ ++ +S QKQ+W K K+MD VLFFK+GKFYEL+E+DA +G K
Sbjct: 316 PGDENYDSRTLYLPPDFVRNLSGGQKQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAK 375
Query: 213 ELYWKITISGVGKCRQVGISESGIYFAVQSLVARGYKVGRVEQLETSEEAKARGANS--- 269
EL + C G E V+ L +GY+V VEQ ET E+ + R S
Sbjct: 376 ELELQYMRGEQPHC---GFPEKNFTVNVERLARKGYRVLVVEQTETPEQMELRRKESGSK 432
Query: 270 --VILRKLVQVVTPSTAVDG---NIGPDATHLLAIKE--GNHGSDDGSVVYGFAFVDCAR 322
V+ R++ VV+ T +DG + P+A +L+A+ E N+ ++ YG VD A
Sbjct: 433 DKVVRREICAVVSKGTLIDGEFMSTNPEAAYLMALTEYCENNPNEMSERTYGVCVVDVAT 492
Query: 323 LRFWVGSIDDDASCSALGALLMQVSPKEVIYESRGLSKEAQKALRKFSGNGSTTLLTPVQ 382
R +G +DD+ CSAL ++L ++ P E++ ++ LS E ++AL K + N L P
Sbjct: 493 SRVILGQFNDDSECSALCSILSEIRPVEIVKPAKLLSAETERALLKHTRNPLVNELIPNV 552
Query: 383 SINDLVNT---------EINDLILSKGYFKGSSDPLDHVMSKVIHREITLSALGGLIGHL 433
D T ND+ G D L ++ LSALGG + +L
Sbjct: 553 EFWDADKTLDHLKRIYGHNNDVSAQDGGLDCLPDVLVELVKTDHDSRSALSALGGALYYL 612
Query: 434 DRLMLDDIL---QNGDLYPYQVY-----KACLKMDGPTLINLEIFSNSDDGGKSGTLYKY 485
+ LD+ L +L P V+ K + +D L NLEIF NS +G SGTLY
Sbjct: 613 KQAFLDEQLLRFAQFELLPCSVFSGLASKPYMVLDAVALENLEIFENSRNGESSGTLYAQ 672
Query: 486 LDNCVTSPGKRLLRNWICCPLKDGEGINNRLDVVDNL--IACPEIVSHIAQHLRKLPDLE 543
L+ CVT+ GKRLL++W+ PL E I R + V L + P + + L KLPD+E
Sbjct: 673 LNQCVTAFGKRLLKSWLARPLYHVESIKERQEAVAGLKGVNLPHTL-EFRKALSKLPDME 731
Query: 544 LLLGRIKST 552
LL R+ S+
Sbjct: 732 RLLARVLSS 740
>Medtr4g111945.1 | DNA mismatch repair MSH3-like protein | HC |
chr4:46289309-46300169 | 20130731
Length = 941
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 160/278 (57%), Gaps = 16/278 (5%)
Query: 670 INCIDVLRSFAMASSFSCGTMSRPVIVPRSECTSKDSGGPVLKMKGLWHPFALGESGCLP 729
I+ +DVL SFA +S SC P R + TS D G +L+ G HP +
Sbjct: 597 ISELDVLLSFADLAS-SC-----PTPYTRPDITSSDEGDIILE--GSRHPCVEAQDWVNF 648
Query: 730 VPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYVPCENCVISVVD 789
+PND L R ++TGPNMGGKST +R + ++MAQ+GC+VPC+ ISV D
Sbjct: 649 IPNDCKL----IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRD 704
Query: 790 IIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTSTFDGYAIAYAV 849
IF R+GA D + G STF E ET+S+L+ AT SL+I+DELGRGTST+DG+ +A+A+
Sbjct: 705 CIFARVGAGDCQLRGVSTFMQEMLETSSILKGATDKSLIIIDELGRGTSTYDGFGLAWAI 764
Query: 850 FRHLIEKVNCLLLFATHYHPLTK---EFASHPRVTMQHMACAFKSKSDTLSKRDQELVFL 906
H+++ + LFATH+H LT E S+ Q + A S + ++L L
Sbjct: 765 CEHIVDVIKAPTLFATHFHELTALADENGSND-THKQIVGVANYHVSAHIDASTRKLTML 823
Query: 907 YRLASGACPESYGLQVALMAGIPEKTVNIASKASQQMK 944
Y++ GAC +S+G+ VA A PE V +A + + +++
Sbjct: 824 YKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELE 861
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 136/324 (41%), Gaps = 31/324 (9%)
Query: 314 GFAFVDCARLRFWVGSIDDDASCSALGALLMQVSPKEVIYE-SRGLSKEAQKALRKFSGN 372
G FVD + + DD+ + + + L+ + KE + RG S E + +
Sbjct: 160 GLGFVDLTKRLLGMAEFLDDSHFTNVESALVGLGCKECLVPIERGKSIEYKMLCDVLTKC 219
Query: 373 GSTTLLTPVQSINDLVNTEINDLILSKGYF-KGSSDPLDHVMSKVIHREITLSALGGLIG 431
G +LT + + DL+ G KGS + + ++S E ALG L+
Sbjct: 220 G--VMLTERKK----SEFKTRDLVQDLGRLVKGSIEAVQDLVSGF---EFAPGALGALLS 270
Query: 432 HLDRLMLDDILQNGDLYPYQVYKACLKMDGPTLINLEIFSNSDDGGKSGTLYKYLD-NCV 490
+ + L + +N L Y + + +++D + L I + D K+ +L+ ++ C
Sbjct: 271 YAELLADESNYENYTLRRYNL-DSYMRLDSAAMRALNILESKTDANKNFSLFGLMNRTCT 329
Query: 491 TSPGKRLLRNWICCPLKDGEGINNRLDVVDNLIACPEIVSHIAQHLRKLPDLELLLGRIK 550
GKRLL W+ PL D IN+RLDVV + + + QHL+++ D+E L+ ++
Sbjct: 330 AGMGKRLLHMWLKQPLLDVNDINSRLDVVQAFVEDTVLRQDLRQHLKRISDIERLVHNLQ 389
Query: 551 STXXXXXXXXXXXXXXXXXXXRVKVFGSLVKGLRTAXXXXXXXQKEQPLISSLNKVF--K 608
VK++ S +R + + S + +
Sbjct: 390 KGKAGLQHV-------------VKLYQS---SIRLPYIKSALDRYDGQFSSMMKSRYLKD 433
Query: 609 LPILTGINGLDKFLTQFEAAVDSD 632
L +LTG + L+KF+ E VD D
Sbjct: 434 LELLTGADRLNKFIELVEICVDLD 457
>Medtr1g100683.2 | DNA mismatch repair MSH3-like protein | HC |
chr1:45623820-45633367 | 20130731
Length = 1072
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/335 (35%), Positives = 178/335 (53%), Gaps = 31/335 (9%)
Query: 661 AQWFEVVNAINCIDVLRSFAMASSFSCGTMSRPVIVPRSECTSKDSGGPV-LKMKGLWHP 719
A++ V A+ +D L S A+ S + G + RPV V D PV +++ HP
Sbjct: 724 AEFQASVQALASLDCLHSLAILSR-NKGYV-RPVFV--------DDHEPVQMQICSGRHP 773
Query: 720 FALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYVP 779
VPND + + DR + C ++ TGPNMGGKS +R L +MAQ+G +VP
Sbjct: 774 VLESILQNNFVPNDTSM--HADREY-CQIV-TGPNMGGKSCYVRQASLIALMAQVGSFVP 829
Query: 780 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 839
+ + V+D I+TR+GA+D I G STF E +ET+ +L T SLVILDELGRGTST
Sbjct: 830 ASSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHILHRCTGRSLVILDELGRGTST 889
Query: 840 FDGYAIAYAVFRHLIEKVNCLLLFATHYHPLTKEFASHP-RVTMQHMACAFKSKSDTLSK 898
DG AIAYA +L+++ L+LF THY + P V HM + + D +SK
Sbjct: 890 HDGMAIAYATLHYLLKQKKSLVLFVTHYPKIASLETEFPGSVAAYHM--SHLTSHDDVSK 947
Query: 899 RD---QELVFLYRLASGACPESYGLQVALMAGIP----EKTVNIASKASQQMKKSI-GRT 950
+++ +LY+L G S+G +VA +A +P + + +ASK + I GR+
Sbjct: 948 NSNDHEDITYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNSRIHGRS 1007
Query: 951 FRSSELRSEFSTLHEEWLKTLMSISRMEDGKSFDE 985
+ EL E +H+E + L E G+++ E
Sbjct: 1008 GK--ELLDE-PVIHQE--QELHHCPHQEFGRAYKE 1037
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 174/428 (40%), Gaps = 82/428 (19%)
Query: 145 ILDASGRRPGDPLYDKTTLYVPPEVMKKMSASQKQYWSIKCKYMDVVLFFKVGKFYELYE 204
+L+ S P P K + P E Q +K KY DV+L +VG Y +
Sbjct: 79 LLEPSNPTPQPPSSSKPVKFTPLE---------HQVVELKAKYPDVLLMIEVGYKYRFFG 129
Query: 205 VDADIGHKELYWKITISGVGKCRQVGISESGIYFAVQSLVARGYKVGRVEQLETSEEAKA 264
DA+ + L I I + V+ LV+ GYKVG V+Q ET+ K+
Sbjct: 130 EDAENAARVL--GIYAHMDHNFLTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAA-IKS 186
Query: 265 RGANSV--ILRKLVQVVTPSTAVDGNIGPDATH-----------------------LLAI 299
G N R L + T +T +A H +L
Sbjct: 187 HGLNRAGPFCRGLSGLYTKATL-------EAAHDMGGGEDGGGTVNNYLLCVVEKSILGE 239
Query: 300 KEGNHGSDDG-SVVYGFAFVDCARLRFWVGSIDDDASCSALGALLMQVSPKEVIYESRGL 358
K+ N G + G V G V+ + G DD+ S L A+++ +SP E++ L
Sbjct: 240 KKFNCGVEGGFDVRIGIVGVEISTGDVVYGEFDDNFLRSELEAVVVSLSPAELLL-GDPL 298
Query: 359 SKEAQKALRKFSGNGSTTLL-----------------------TPVQSINDLVNTEINDL 395
SK+ +K L F+G S + T S + + N E+ +L
Sbjct: 299 SKQTEKLLLAFAGPSSNARVERASRDCFTNGGAFAEVMTLYENTHADSPDSMQNNELAEL 358
Query: 396 ILSKGYFKGSSDPLDHVMSKVIH-REITLSALGGLIGHLDRLMLDDILQNGDLYPYQVYK 454
GS V+ +V++ E+ + AL I HL + IL +G L P+ V
Sbjct: 359 --------GSQQ---MVVKEVMNLPELAVEALALTIRHLKGFGFERILCSGALRPF-VSN 406
Query: 455 ACLKMDGPTLINLEIFSNSDDGGKSGTLYKYLDNCVTSPGKRLLRNWICCPLKDGEGINN 514
+ + TL LE+ N+ DG SG+L + +++ +T G RLL++W+ PL D I
Sbjct: 407 TEMTLSANTLQQLEVLQNNSDGSASGSLLQVMNHTLTIFGSRLLKHWVSHPLCDQTLIAA 466
Query: 515 RLDVVDNL 522
RL+ V +
Sbjct: 467 RLNAVSEI 474
>Medtr1g100683.1 | DNA mismatch repair MSH3-like protein | HC |
chr1:45623796-45633355 | 20130731
Length = 1072
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/335 (35%), Positives = 178/335 (53%), Gaps = 31/335 (9%)
Query: 661 AQWFEVVNAINCIDVLRSFAMASSFSCGTMSRPVIVPRSECTSKDSGGPV-LKMKGLWHP 719
A++ V A+ +D L S A+ S + G + RPV V D PV +++ HP
Sbjct: 724 AEFQASVQALASLDCLHSLAILSR-NKGYV-RPVFV--------DDHEPVQMQICSGRHP 773
Query: 720 FALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYVP 779
VPND + + DR + C ++ TGPNMGGKS +R L +MAQ+G +VP
Sbjct: 774 VLESILQNNFVPNDTSM--HADREY-CQIV-TGPNMGGKSCYVRQASLIALMAQVGSFVP 829
Query: 780 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 839
+ + V+D I+TR+GA+D I G STF E +ET+ +L T SLVILDELGRGTST
Sbjct: 830 ASSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHILHRCTGRSLVILDELGRGTST 889
Query: 840 FDGYAIAYAVFRHLIEKVNCLLLFATHYHPLTKEFASHP-RVTMQHMACAFKSKSDTLSK 898
DG AIAYA +L+++ L+LF THY + P V HM + + D +SK
Sbjct: 890 HDGMAIAYATLHYLLKQKKSLVLFVTHYPKIASLETEFPGSVAAYHM--SHLTSHDDVSK 947
Query: 899 RD---QELVFLYRLASGACPESYGLQVALMAGIP----EKTVNIASKASQQMKKSI-GRT 950
+++ +LY+L G S+G +VA +A +P + + +ASK + I GR+
Sbjct: 948 NSNDHEDITYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNSRIHGRS 1007
Query: 951 FRSSELRSEFSTLHEEWLKTLMSISRMEDGKSFDE 985
+ EL E +H+E + L E G+++ E
Sbjct: 1008 GK--ELLDE-PVIHQE--QELHHCPHQEFGRAYKE 1037
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 174/428 (40%), Gaps = 82/428 (19%)
Query: 145 ILDASGRRPGDPLYDKTTLYVPPEVMKKMSASQKQYWSIKCKYMDVVLFFKVGKFYELYE 204
+L+ S P P K + P E Q +K KY DV+L +VG Y +
Sbjct: 79 LLEPSNPTPQPPSSSKPVKFTPLE---------HQVVELKAKYPDVLLMIEVGYKYRFFG 129
Query: 205 VDADIGHKELYWKITISGVGKCRQVGISESGIYFAVQSLVARGYKVGRVEQLETSEEAKA 264
DA+ + L I I + V+ LV+ GYKVG V+Q ET+ K+
Sbjct: 130 EDAENAARVL--GIYAHMDHNFLTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAA-IKS 186
Query: 265 RGANSV--ILRKLVQVVTPSTAVDGNIGPDATH-----------------------LLAI 299
G N R L + T +T +A H +L
Sbjct: 187 HGLNRAGPFCRGLSGLYTKATL-------EAAHDMGGGEDGGGTVNNYLLCVVEKSILGE 239
Query: 300 KEGNHGSDDG-SVVYGFAFVDCARLRFWVGSIDDDASCSALGALLMQVSPKEVIYESRGL 358
K+ N G + G V G V+ + G DD+ S L A+++ +SP E++ L
Sbjct: 240 KKFNCGVEGGFDVRIGIVGVEISTGDVVYGEFDDNFLRSELEAVVVSLSPAELLL-GDPL 298
Query: 359 SKEAQKALRKFSGNGSTTLL-----------------------TPVQSINDLVNTEINDL 395
SK+ +K L F+G S + T S + + N E+ +L
Sbjct: 299 SKQTEKLLLAFAGPSSNARVERASRDCFTNGGAFAEVMTLYENTHADSPDSMQNNELAEL 358
Query: 396 ILSKGYFKGSSDPLDHVMSKVIH-REITLSALGGLIGHLDRLMLDDILQNGDLYPYQVYK 454
GS V+ +V++ E+ + AL I HL + IL +G L P+ V
Sbjct: 359 --------GSQQ---MVVKEVMNLPELAVEALALTIRHLKGFGFERILCSGALRPF-VSN 406
Query: 455 ACLKMDGPTLINLEIFSNSDDGGKSGTLYKYLDNCVTSPGKRLLRNWICCPLKDGEGINN 514
+ + TL LE+ N+ DG SG+L + +++ +T G RLL++W+ PL D I
Sbjct: 407 TEMTLSANTLQQLEVLQNNSDGSASGSLLQVMNHTLTIFGSRLLKHWVSHPLCDQTLIAA 466
Query: 515 RLDVVDNL 522
RL+ V +
Sbjct: 467 RLNAVSEI 474
>Medtr5g093110.1 | DNA mismatch repair protein MutS | HC |
chr5:40657110-40644297 | 20130731
Length = 810
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 11/203 (5%)
Query: 749 LLTGPNMGGKSTLLRATCLAVIMAQLGCYVPCENCVISVVDIIFTRLGATDRIMAGE-ST 807
++TGPN GKS ++ + V +A +G +VP + + + D IF G+ R+M E ST
Sbjct: 568 IITGPNFSGKSIYIKQVAIIVFLAHIGSFVPADAATVGLTDRIFCATGS--RLMTAEQST 625
Query: 808 FFIECTETASVLQNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNC----LLLF 863
F I+ + +L++AT SL ++DE G+GT T DG + H I C +
Sbjct: 626 FMIDLHQIGMMLRHATSRSLCLVDEFGKGTLTEDGIGLLAGAINHFI---TCDEPPKVFV 682
Query: 864 ATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKRDQELVFLYRLASGACPESYGLQVA 923
TH L + ++ + D S +++VFLYRL G SYGL A
Sbjct: 683 CTHLMDLLHGCSLTKSEQIKFYTMSILRPEDD-STHIEDIVFLYRLVPGHVHHSYGLHCA 741
Query: 924 LMAGIPEKTVNIASKASQQMKKS 946
L+AG+P++ + A+ + K+
Sbjct: 742 LLAGVPDEIIKRAAVVLDAVSKN 764
>Medtr1g045670.1 | DNA mismatch repair protein | HC |
chr1:17167339-17152759 | 20130731
Length = 1138
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 93/189 (49%), Gaps = 10/189 (5%)
Query: 748 LLLTGPNMGGKSTLLRATCLAVIMAQLGCYVPCENCVISVVDIIFTRLGATDRIMAGEST 807
LLTGPN GGKS+LLR+ C A ++ G VP E+ VI D I + + D +S+
Sbjct: 765 FLLTGPNGGGKSSLLRSICAAALLGICGLMVPAESAVIPYFDSIMLHMKSYDSPADHKSS 824
Query: 808 FFIECTETASVLQNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCLLLFATHY 867
F +E +E S++ T+ SLV++DE+ RGT T G IA ++ L ++ CL + +TH
Sbjct: 825 FQVEMSELRSIIAGTTKRSLVLVDEICRGTETAKGTCIAGSIIETL-DRSGCLGIVSTHL 883
Query: 868 HPLTKEFASHPRVTMQHMACAFKSKSDTLSKRDQELVFLYRLASGACPESYGLQVALMAG 927
H + T+ K+ + D + + L G C ES + A G
Sbjct: 884 HDI---------FTLPLNITNTVHKAMGTTCIDGQTKPTWMLTDGVCKESLAFETAKREG 934
Query: 928 IPEKTVNIA 936
IPE + A
Sbjct: 935 IPEIIIQRA 943
>Medtr5g068600.7 | DNA mismatch repair MUTS family protein | HC |
chr5:29049681-29066879 | 20130731
Length = 699
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 17/219 (7%)
Query: 721 ALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYV-P 779
AL ++ PVP D ++ N+ R +++TGPN GGK+ L+ LA +MA+ G YV
Sbjct: 309 ALDKAQPQPVPVDFLVS-NKTR----VIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLA 363
Query: 780 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 839
E+ I D +F +G + STF + +++ +T+ SLV+LDE+G GT+
Sbjct: 364 SESVQIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNP 423
Query: 840 FDGYAIAYAVFRHLIEKVNCLLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKR 899
+G A+ ++ L CLL AT +H K T+++ AF++ +
Sbjct: 424 LEGAALGMSLLESLAHG-GCLLTIATTHHGELK--------TLKYSNEAFENA--CMEFD 472
Query: 900 DQELVFLYRLASGACPESYGLQVALMAGIPEKTVNIASK 938
+ L Y++ G S + +A G+P ++ A K
Sbjct: 473 EVNLKPTYKVLWGIPGRSNAINIAERLGLPSVVIDAARK 511
>Medtr5g068600.6 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29066879 | 20130731
Length = 799
Score = 80.5 bits (197), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 17/219 (7%)
Query: 721 ALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYV-P 779
AL ++ PVP D ++ N+ R +++TGPN GGK+ L+ LA +MA+ G YV
Sbjct: 409 ALDKAQPQPVPVDFLVS-NKTR----VIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLA 463
Query: 780 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 839
E+ I D +F +G + STF + +++ +T+ SLV+LDE+G GT+
Sbjct: 464 SESVQIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNP 523
Query: 840 FDGYAIAYAVFRHLIEKVNCLLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKR 899
+G A+ ++ L CLL AT +H K T+++ AF++ +
Sbjct: 524 LEGAALGMSLLESLAHG-GCLLTIATTHHGELK--------TLKYSNEAFENA--CMEFD 572
Query: 900 DQELVFLYRLASGACPESYGLQVALMAGIPEKTVNIASK 938
+ L Y++ G S + +A G+P ++ A K
Sbjct: 573 EVNLKPTYKVLWGIPGRSNAINIAERLGLPSVVIDAARK 611
>Medtr5g068600.5 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29067003 | 20130731
Length = 799
Score = 80.5 bits (197), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 17/219 (7%)
Query: 721 ALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYV-P 779
AL ++ PVP D ++ N+ R +++TGPN GGK+ L+ LA +MA+ G YV
Sbjct: 409 ALDKAQPQPVPVDFLVS-NKTR----VIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLA 463
Query: 780 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 839
E+ I D +F +G + STF + +++ +T+ SLV+LDE+G GT+
Sbjct: 464 SESVQIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNP 523
Query: 840 FDGYAIAYAVFRHLIEKVNCLLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKR 899
+G A+ ++ L CLL AT +H K T+++ AF++ +
Sbjct: 524 LEGAALGMSLLESLAHG-GCLLTIATTHHGELK--------TLKYSNEAFENA--CMEFD 572
Query: 900 DQELVFLYRLASGACPESYGLQVALMAGIPEKTVNIASK 938
+ L Y++ G S + +A G+P ++ A K
Sbjct: 573 EVNLKPTYKVLWGIPGRSNAINIAERLGLPSVVIDAARK 611
>Medtr5g068600.2 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29066879 | 20130731
Length = 799
Score = 80.5 bits (197), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 17/219 (7%)
Query: 721 ALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYV-P 779
AL ++ PVP D ++ N+ R +++TGPN GGK+ L+ LA +MA+ G YV
Sbjct: 409 ALDKAQPQPVPVDFLVS-NKTR----VIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLA 463
Query: 780 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 839
E+ I D +F +G + STF + +++ +T+ SLV+LDE+G GT+
Sbjct: 464 SESVQIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNP 523
Query: 840 FDGYAIAYAVFRHLIEKVNCLLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKR 899
+G A+ ++ L CLL AT +H K T+++ AF++ +
Sbjct: 524 LEGAALGMSLLESLAHG-GCLLTIATTHHGELK--------TLKYSNEAFENA--CMEFD 572
Query: 900 DQELVFLYRLASGACPESYGLQVALMAGIPEKTVNIASK 938
+ L Y++ G S + +A G+P ++ A K
Sbjct: 573 EVNLKPTYKVLWGIPGRSNAINIAERLGLPSVVIDAARK 611
>Medtr5g068600.1 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29066750 | 20130731
Length = 799
Score = 80.5 bits (197), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 17/219 (7%)
Query: 721 ALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYV-P 779
AL ++ PVP D ++ N+ R +++TGPN GGK+ L+ LA +MA+ G YV
Sbjct: 409 ALDKAQPQPVPVDFLVS-NKTR----VIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLA 463
Query: 780 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 839
E+ I D +F +G + STF + +++ +T+ SLV+LDE+G GT+
Sbjct: 464 SESVQIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNP 523
Query: 840 FDGYAIAYAVFRHLIEKVNCLLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKR 899
+G A+ ++ L CLL AT +H K T+++ AF++ +
Sbjct: 524 LEGAALGMSLLESLAHG-GCLLTIATTHHGELK--------TLKYSNEAFENA--CMEFD 572
Query: 900 DQELVFLYRLASGACPESYGLQVALMAGIPEKTVNIASK 938
+ L Y++ G S + +A G+P ++ A K
Sbjct: 573 EVNLKPTYKVLWGIPGRSNAINIAERLGLPSVVIDAARK 611
>Medtr5g068600.4 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29067003 | 20130731
Length = 799
Score = 80.5 bits (197), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 17/219 (7%)
Query: 721 ALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYV-P 779
AL ++ PVP D ++ N+ R +++TGPN GGK+ L+ LA +MA+ G YV
Sbjct: 409 ALDKAQPQPVPVDFLVS-NKTR----VIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLA 463
Query: 780 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 839
E+ I D +F +G + STF + +++ +T+ SLV+LDE+G GT+
Sbjct: 464 SESVQIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNP 523
Query: 840 FDGYAIAYAVFRHLIEKVNCLLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKR 899
+G A+ ++ L CLL AT +H K T+++ AF++ +
Sbjct: 524 LEGAALGMSLLESLAHG-GCLLTIATTHHGELK--------TLKYSNEAFENA--CMEFD 572
Query: 900 DQELVFLYRLASGACPESYGLQVALMAGIPEKTVNIASK 938
+ L Y++ G S + +A G+P ++ A K
Sbjct: 573 EVNLKPTYKVLWGIPGRSNAINIAERLGLPSVVIDAARK 611
>Medtr5g068600.3 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29067003 | 20130731
Length = 799
Score = 80.5 bits (197), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 17/219 (7%)
Query: 721 ALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYV-P 779
AL ++ PVP D ++ N+ R +++TGPN GGK+ L+ LA +MA+ G YV
Sbjct: 409 ALDKAQPQPVPVDFLVS-NKTR----VIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLA 463
Query: 780 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 839
E+ I D +F +G + STF + +++ +T+ SLV+LDE+G GT+
Sbjct: 464 SESVQIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNP 523
Query: 840 FDGYAIAYAVFRHLIEKVNCLLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKR 899
+G A+ ++ L CLL AT +H K T+++ AF++ +
Sbjct: 524 LEGAALGMSLLESLAHG-GCLLTIATTHHGELK--------TLKYSNEAFENA--CMEFD 572
Query: 900 DQELVFLYRLASGACPESYGLQVALMAGIPEKTVNIASK 938
+ L Y++ G S + +A G+P ++ A K
Sbjct: 573 EVNLKPTYKVLWGIPGRSNAINIAERLGLPSVVIDAARK 611
>Medtr4g088920.1 | DNA mismatch repair protein MutS2 | HC |
chr4:35517782-35512675 | 20130731
Length = 913
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 18/218 (8%)
Query: 728 LPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYVPCENC-VIS 786
PVP D + R ++++GPN GGK+ ++ LA +M++ G ++P + +
Sbjct: 412 FPVPVDFKI-----RSGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKSPKLP 466
Query: 787 VVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTSTFDGYAIA 846
D+I +G + STF + L+ A++ SLV++DE+G GT +G A++
Sbjct: 467 WFDLILVDIGDHQSLEQNLSTFSGHISRIRKFLEVASKQSLVLIDEIGSGTDPSEGVALS 526
Query: 847 YAVFRHLIEKVNCLLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKRDQELVFL 906
++ ++L E VN L + THY L+ TM+ F++ + S + L
Sbjct: 527 ASILQYLREHVN-LAVVTTHYADLS---------TMKEKDTCFENAAMEFSL--ETLQPT 574
Query: 907 YRLASGACPESYGLQVALMAGIPEKTVNIASKASQQMK 944
YR+ G +S L +A G + ++ A K +++K
Sbjct: 575 YRVLWGCTGDSNALSIAQSIGFDKNIIDHAQKWVEKLK 612