Miyakogusa Predicted Gene
- Lj1g3v0173680.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0173680.1 tr|G7K5Z4|G7K5Z4_MEDTR Serine
hydroxymethyltransferase OS=Medicago truncatula GN=MTR_5g067060 PE=3
S,89.89,0,no description,Pyridoxal phosphate-dependent transferase,
major region, subdomain 1; no description,,CUFF.25317.1
(444 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g067060.1 | serine transhydroxymethyltransferase | HC | ch... 808 0.0
Medtr5g030950.1 | serine hydroxymethyltransferase | HC | chr5:13... 784 0.0
Medtr2g018290.1 | serine transhydroxymethyltransferase | HC | ch... 519 e-147
Medtr8g081510.1 | serine transhydroxymethyltransferase | HC | ch... 505 e-143
Medtr3g084310.1 | serine transhydroxymethyltransferase | HC | ch... 501 e-142
Medtr3g084310.2 | serine transhydroxymethyltransferase | HC | ch... 464 e-131
Medtr3g084310.3 | serine transhydroxymethyltransferase | HC | ch... 464 e-131
Medtr2g006570.1 | serine hydroxymethyltransferase | HC | chr2:60... 456 e-128
Medtr2g006570.4 | serine hydroxymethyltransferase | HC | chr2:60... 456 e-128
Medtr3g073470.1 | serine transhydroxymethyltransferase | HC | ch... 438 e-123
Medtr2g006570.2 | serine hydroxymethyltransferase | HC | chr2:60... 408 e-114
Medtr2g006570.3 | serine hydroxymethyltransferase | HC | chr2:60... 408 e-114
Medtr7g108420.1 | serine transhydroxymethyltransferase | HC | ch... 376 e-104
Medtr3g062030.1 | serine transhydroxymethyltransferase | HC | ch... 105 1e-22
Medtr1g073580.1 | serine transhydroxymethyltransferase | HC | ch... 84 3e-16
Medtr7g070020.1 | serine transhydroxymethyltransferase | HC | ch... 75 1e-13
>Medtr5g067060.1 | serine transhydroxymethyltransferase | HC |
chr5:28321057-28329894 | 20130731
Length = 507
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/435 (91%), Positives = 411/435 (94%), Gaps = 3/435 (0%)
Query: 1 MAMALRRLSSTFTKPPTASSVYRMSSSLPALDNDKSRADWIKQLNDPLETIDPEIADIIE 60
MAMALRRL+ST KP +S+YR+SSSL A KS DWIKQLNDPL +DPEI DIIE
Sbjct: 1 MAMALRRLTSTINKP---TSLYRLSSSLSAQHTHKSHPDWIKQLNDPLGVVDPEIEDIIE 57
Query: 61 LEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQK 120
LEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQK
Sbjct: 58 LEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQK 117
Query: 121 RALEAFGLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTK 180
RALE FGLDP +WGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTK
Sbjct: 118 RALETFGLDPTQWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTK 177
Query: 181 KISAVSIFFETMPYRLNETTGYIDYDQMEKSAALFRPKLIVAGASAYARLYDYERIRKVC 240
KISAVSIFFETMPYRL+E+TGYIDYDQMEKSAALFRPKLIVAGASAYARLYDY RIRKVC
Sbjct: 178 KISAVSIFFETMPYRLDESTGYIDYDQMEKSAALFRPKLIVAGASAYARLYDYARIRKVC 237
Query: 241 DKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK 300
DKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKG+KEINK
Sbjct: 238 DKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGLKEINK 297
Query: 301 KGQEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQAMTPEFKNYQKQVLSNSSAFA 360
KGQEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQAMTPEFKNYQKQVLSNSS FA
Sbjct: 298 KGQEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQAMTPEFKNYQKQVLSNSSTFA 357
Query: 361 QSLIEKGYELVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMIPG 420
QSL+EKGY+LVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAM+PG
Sbjct: 358 QSLLEKGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPG 417
Query: 421 GIRMGNVSLSHLFFM 435
GIRMG +L+ F+
Sbjct: 418 GIRMGTPALTSRGFV 432
>Medtr5g030950.1 | serine hydroxymethyltransferase | HC |
chr5:13269359-13264124 | 20130731
Length = 518
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/442 (85%), Positives = 402/442 (90%), Gaps = 8/442 (1%)
Query: 1 MAMALRRLSSTFTKPP----TASSVYRMSSSLP---ALDNDKSRADWIKQLNDPLETIDP 53
MAMALRRLSS+ K +ASSVY SSLP D + SR W KQLN LE IDP
Sbjct: 3 MAMALRRLSSSINKSSRPLFSASSVY-YKSSLPDEAVYDKENSRVSWPKQLNSSLEEIDP 61
Query: 54 EIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 113
EIADIIELEKARQWKGLELIPSENFTSLSVMQAVGS+MTNKYSEGYPGARYYGGNEYIDM
Sbjct: 62 EIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSIMTNKYSEGYPGARYYGGNEYIDM 121
Query: 114 AETLCQKRALEAFGLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSH 173
AETLCQKRALEAF LDPAKWGVNVQ LSGSPSNF VYTALLKPH+RIMALDLPHGGHLSH
Sbjct: 122 AETLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFHVYTALLKPHDRIMALDLPHGGHLSH 181
Query: 174 GYQTDTKKISAVSIFFETMPYRLNETTGYIDYDQMEKSAALFRPKLIVAGASAYARLYDY 233
GYQTDTKKISAVSIFFETMPYRL+E+TGYIDYDQ+EKSA LFRPKLIVAGASAYARLYDY
Sbjct: 182 GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY 241
Query: 234 ERIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRK 293
RIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRK
Sbjct: 242 ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRK 301
Query: 294 GVKEINKKGQEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQAMTPEFKNYQKQVL 353
G+KE+NK+G+EV YDYEDKINQAVFPGLQGGPHNHTITGLAVALKQA TPE+K YQ+QVL
Sbjct: 302 GLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVL 361
Query: 354 SNSSAFAQSLIEKGYELVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD 413
SN + FAQ+L EKGYELVSGGTENHLVLVNL+NKGIDGSRVEKVLE+VHIAANKNTVPGD
Sbjct: 362 SNCAKFAQALSEKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGD 421
Query: 414 VSAMIPGGIRMGNVSLSHLFFM 435
VSAM+PGGIRMG +L+ F+
Sbjct: 422 VSAMVPGGIRMGTPALTSRGFV 443
>Medtr2g018290.1 | serine transhydroxymethyltransferase | HC |
chr2:5753431-5749086 | 20130731
Length = 533
Score = 519 bits (1336), Expect = e-147, Method: Compositional matrix adjust.
Identities = 245/384 (63%), Positives = 299/384 (77%), Gaps = 10/384 (2%)
Query: 48 LETIDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGG 107
L DP++ II EK RQ++ LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGG
Sbjct: 87 LSEADPDVHAIINKEKDRQFRSLELIASENFTSKAVMEAVGSCLTNKYSEGLPGKRYYGG 146
Query: 108 NEYIDMAETLCQKRALEAFGLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPH 167
NE+ID E LCQ+RAL AF LD KWGVNVQ LSGSP+NF VYTA+LKPH+RIM LDLPH
Sbjct: 147 NEHIDELEILCQQRALAAFHLDGDKWGVNVQPLSGSPANFAVYTAILKPHDRIMGLDLPH 206
Query: 168 GGHLSHGYQTDTKKISAVSIFFETMPYRLNETTGYIDYDQMEKSAALFRPKLIVAGASAY 227
GGHLSHG+ T +++S SI+FE+MPYRL+E+TG IDYD +EK+AALFRPKLI+AGASAY
Sbjct: 207 GGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGVIDYDMLEKTAALFRPKLIIAGASAY 266
Query: 228 ARLYDYERIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGA 287
R DY R RK+ D A ++ DMAH+SGL+AA V+ PF++ D+VTTTTHKSLRGPRG
Sbjct: 267 PRDIDYARFRKIADSVGAFLMMDMAHVSGLIAASVLADPFEFVDIVTTTTHKSLRGPRGG 326
Query: 288 MIFFRK-GVKEINKKGQEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQAMTPEFK 346
MIFF+K V + D E IN AVFPGLQGGPHNHTI GLAV LK A +P+FK
Sbjct: 327 MIFFKKDAVHGV---------DLESAINNAVFPGLQGGPHNHTIGGLAVCLKYAQSPDFK 377
Query: 347 NYQKQVLSNSSAFAQSLIEKGYELVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAAN 406
NYQ QV++N A A L+E Y+LVSGG++NHLVLV+LR GIDG+RVEK+L+ I N
Sbjct: 378 NYQNQVVANCRALANRLVEHEYKLVSGGSDNHLVLVDLRPSGIDGARVEKILDMASITLN 437
Query: 407 KNTVPGDVSAMIPGGIRMGNVSLS 430
KN+VPGD SA++PGGIR+G+ +++
Sbjct: 438 KNSVPGDKSALVPGGIRIGSPAMT 461
>Medtr8g081510.1 | serine transhydroxymethyltransferase | HC |
chr8:35166970-35170149 | 20130731
Length = 471
Score = 505 bits (1300), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/389 (62%), Positives = 299/389 (76%), Gaps = 4/389 (1%)
Query: 45 NDPLETIDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARY 104
N PL T+DPEI D+IE EK RQ +G+ELI SENFTS +V++A+GS +TNKYSEG PG RY
Sbjct: 9 NTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRY 68
Query: 105 YGGNEYIDMAETLCQKRALEAFGLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALD 164
YGGNE+ID E LC+ RAL+AF +DP WGVNVQ SGSP+NF YTA+L PH+RIM LD
Sbjct: 69 YGGNEFIDQIENLCRSRALQAFHIDPQSWGVNVQPYSGSPANFAAYTAVLNPHDRIMGLD 128
Query: 165 LPHGGHLSHGYQTD-TKKISAVSIFFETMPYRLNETTGYIDYDQMEKSAALFRPKLIVAG 223
LP GGHL+HGY T KKISA SI+FE++PY++N TTG+IDYD++E+ A FRP+LI+ G
Sbjct: 129 LPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSTTGFIDYDRLEEKALDFRPRLIICG 188
Query: 224 ASAYARLYDYERIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRG 283
SAY R +DY+R R V DK A++L DMAH SGLVAA + +PF+Y D+VTTTTHKSLRG
Sbjct: 189 GSAYPRDWDYKRFRDVADKCGALLLCDMAHFSGLVAAQEVNNPFEYCDIVTTTTHKSLRG 248
Query: 284 PRGAMIFFRKGVKEINKKGQ--EVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQAM 341
PR MIF+RKG K KKGQ +YD+EDKIN AVFP LQGGPHNH I LAVALKQAM
Sbjct: 249 PRAGMIFYRKGPKP-PKKGQPENAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAM 307
Query: 342 TPEFKNYQKQVLSNSSAFAQSLIEKGYELVSGGTENHLVLVNLRNKGIDGSRVEKVLESV 401
+P FK Y KQV +N+ A L+ KGY LV+GGTENHLVL +LR G+ G++VEK+ +
Sbjct: 308 SPGFKAYAKQVKANAVAIGNYLMSKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLC 367
Query: 402 HIAANKNTVPGDVSAMIPGGIRMGNVSLS 430
+I NKN V GD SA+ PGG+R+G +++
Sbjct: 368 NITVNKNAVFGDSSALAPGGVRVGAPAMT 396
>Medtr3g084310.1 | serine transhydroxymethyltransferase | HC |
chr3:38069696-38067331 | 20130731
Length = 471
Score = 501 bits (1290), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/389 (62%), Positives = 295/389 (75%), Gaps = 4/389 (1%)
Query: 45 NDPLETIDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARY 104
N PL T+DPEI D+IE EK RQ +G+ELI SENFTS +V++A+GS +TNKYSEG PG RY
Sbjct: 9 NTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRY 68
Query: 105 YGGNEYIDMAETLCQKRALEAFGLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALD 164
YGGNE+ID E +C+ RAL AF LD A WGVNVQ SGSP+NF YTA+L PH+RIM LD
Sbjct: 69 YGGNEFIDQIENICRSRALTAFHLDAATWGVNVQPYSGSPANFAAYTAVLNPHDRIMGLD 128
Query: 165 LPHGGHLSHGYQTD-TKKISAVSIFFETMPYRLNETTGYIDYDQMEKSAALFRPKLIVAG 223
LP GGHL+HGY T KKISA SI+FE++PY++N TTG+IDYD++E+ A FRPKLI+ G
Sbjct: 129 LPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSTTGFIDYDRLEEKALDFRPKLIICG 188
Query: 224 ASAYARLYDYERIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRG 283
SAY R +DY R R+V DK A++L DMAHISGLVAA PF + D+VTTTTHKSLRG
Sbjct: 189 GSAYPRDWDYGRFRQVADKCGALLLCDMAHISGLVAAQEANDPFAFCDIVTTTTHKSLRG 248
Query: 284 PRGAMIFFRKGVKEINKKGQ--EVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQAM 341
PR MIF+RKG K KKGQ +YD+EDKIN AVFP LQGGPHNH I LAVALKQA
Sbjct: 249 PRAGMIFYRKGPKP-PKKGQPENAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAT 307
Query: 342 TPEFKNYQKQVLSNSSAFAQSLIEKGYELVSGGTENHLVLVNLRNKGIDGSRVEKVLESV 401
TP FK Y KQV +N+ A LI KGY LV+GGTENHLVL +LR G+ G++VEK+ +
Sbjct: 308 TPGFKAYAKQVKANAVALGNYLISKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLC 367
Query: 402 HIAANKNTVPGDVSAMIPGGIRMGNVSLS 430
+I NKN V GD SA+ PGG+R+G +++
Sbjct: 368 NITVNKNAVFGDSSALAPGGVRIGAPAMT 396
>Medtr3g084310.2 | serine transhydroxymethyltransferase | HC |
chr3:38069607-38067880 | 20130731
Length = 365
Score = 464 bits (1194), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/353 (64%), Positives = 268/353 (75%), Gaps = 4/353 (1%)
Query: 45 NDPLETIDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARY 104
N PL T+DPEI D+IE EK RQ +G+ELI SENFTS +V++A+GS +TNKYSEG PG RY
Sbjct: 9 NTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRY 68
Query: 105 YGGNEYIDMAETLCQKRALEAFGLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALD 164
YGGNE+ID E +C+ RAL AF LD A WGVNVQ SGSP+NF YTA+L PH+RIM LD
Sbjct: 69 YGGNEFIDQIENICRSRALTAFHLDAATWGVNVQPYSGSPANFAAYTAVLNPHDRIMGLD 128
Query: 165 LPHGGHLSHGYQTD-TKKISAVSIFFETMPYRLNETTGYIDYDQMEKSAALFRPKLIVAG 223
LP GGHL+HGY T KKISA SI+FE++PY++N TTG+IDYD++E+ A FRPKLI+ G
Sbjct: 129 LPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSTTGFIDYDRLEEKALDFRPKLIICG 188
Query: 224 ASAYARLYDYERIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRG 283
SAY R +DY R R+V DK A++L DMAHISGLVAA PF + D+VTTTTHKSLRG
Sbjct: 189 GSAYPRDWDYGRFRQVADKCGALLLCDMAHISGLVAAQEANDPFAFCDIVTTTTHKSLRG 248
Query: 284 PRGAMIFFRKGVKEINKKGQ--EVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQAM 341
PR MIF+RKG K KKGQ +YD+EDKIN AVFP LQGGPHNH I LAVALKQA
Sbjct: 249 PRAGMIFYRKGPKP-PKKGQPENAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAT 307
Query: 342 TPEFKNYQKQVLSNSSAFAQSLIEKGYELVSGGTENHLVLVNLRNKGIDGSRV 394
TP FK Y KQV +N+ A LI KGY LV+GGTENHLVL +LR G+ G +
Sbjct: 308 TPGFKAYAKQVKANAVALGNYLISKGYSLVTGGTENHLVLWDLRPLGLTGKLI 360
>Medtr3g084310.3 | serine transhydroxymethyltransferase | HC |
chr3:38069651-38067331 | 20130731
Length = 365
Score = 464 bits (1194), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/353 (64%), Positives = 268/353 (75%), Gaps = 4/353 (1%)
Query: 45 NDPLETIDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARY 104
N PL T+DPEI D+IE EK RQ +G+ELI SENFTS +V++A+GS +TNKYSEG PG RY
Sbjct: 9 NTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRY 68
Query: 105 YGGNEYIDMAETLCQKRALEAFGLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALD 164
YGGNE+ID E +C+ RAL AF LD A WGVNVQ SGSP+NF YTA+L PH+RIM LD
Sbjct: 69 YGGNEFIDQIENICRSRALTAFHLDAATWGVNVQPYSGSPANFAAYTAVLNPHDRIMGLD 128
Query: 165 LPHGGHLSHGYQTD-TKKISAVSIFFETMPYRLNETTGYIDYDQMEKSAALFRPKLIVAG 223
LP GGHL+HGY T KKISA SI+FE++PY++N TTG+IDYD++E+ A FRPKLI+ G
Sbjct: 129 LPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSTTGFIDYDRLEEKALDFRPKLIICG 188
Query: 224 ASAYARLYDYERIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRG 283
SAY R +DY R R+V DK A++L DMAHISGLVAA PF + D+VTTTTHKSLRG
Sbjct: 189 GSAYPRDWDYGRFRQVADKCGALLLCDMAHISGLVAAQEANDPFAFCDIVTTTTHKSLRG 248
Query: 284 PRGAMIFFRKGVKEINKKGQ--EVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQAM 341
PR MIF+RKG K KKGQ +YD+EDKIN AVFP LQGGPHNH I LAVALKQA
Sbjct: 249 PRAGMIFYRKGPKP-PKKGQPENAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAT 307
Query: 342 TPEFKNYQKQVLSNSSAFAQSLIEKGYELVSGGTENHLVLVNLRNKGIDGSRV 394
TP FK Y KQV +N+ A LI KGY LV+GGTENHLVL +LR G+ G +
Sbjct: 308 TPGFKAYAKQVKANAVALGNYLISKGYSLVTGGTENHLVLWDLRPLGLTGKLI 360
>Medtr2g006570.1 | serine hydroxymethyltransferase | HC |
chr2:605414-610991 | 20130731
Length = 593
Score = 456 bits (1172), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/438 (52%), Positives = 301/438 (68%), Gaps = 10/438 (2%)
Query: 1 MAMALRRLSSTFTKPPTASSVYRMSSSLPALDNDKSRADWIKQLND-PLETIDPEIADII 59
M + RR S + T +SV S L + +SR ++ D PL+ DP+I +II
Sbjct: 90 MCIKRRRDSESSTITTKRASV--ESDRGDRLLDLESRKAAVRSWGDQPLQVADPDIYEII 147
Query: 60 ELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQ 119
E EK RQ+KG+ELI SENF +VM+A+GS +TNKYSEG PGARYYGGN+YID ETLC
Sbjct: 148 EKEKKRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYGGNQYIDEIETLCC 207
Query: 120 KRALEAFGLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHGYQT-D 178
+RAL AF LDP WGVNVQ S + +NF VYT LL P +RIM LD P GG+ SHGY T +
Sbjct: 208 ERALAAFNLDPKCWGVNVQPYSCTSANFAVYTGLLAPGDRIMGLDTPSGGNTSHGYYTPN 267
Query: 179 TKKISAVSIFFETMPYRLNETTGYIDYDQMEKSAALFRPKLIVAGASAYARLYDYERIRK 238
KK+S SIFFE++ Y++N +G+IDYD++E+ A FRPK+++ G S+Y R +DY R R
Sbjct: 268 GKKVSGASIFFESLAYKINPQSGFIDYDKLEERALDFRPKILICGGSSYPREWDYARFRH 327
Query: 239 VCDKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEI 298
V DK AV+L DMA ISG++AA +PFDY DVVT+TTHKSLRGPRG +IF+RKG K
Sbjct: 328 VADKCGAVLLCDMAQISGIIAAKECVNPFDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPR 387
Query: 299 NK-----KGQEV-LYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQAMTPEFKNYQKQV 352
+ +G E YD+E+KIN AVFP LQGGPHN+ I LA+ALKQ TPE+K Y +QV
Sbjct: 388 KRGILLTQGHESDQYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQV 447
Query: 353 LSNSSAFAQSLIEKGYELVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPG 412
N+ A A +L+ + LV+GGT+NHL+L +LR G+ G EKV E+ HI NK + G
Sbjct: 448 KKNAQALASALLRRKCRLVTGGTDNHLILWDLRPLGLTGKFYEKVCEACHITLNKIAIFG 507
Query: 413 DVSAMIPGGIRMGNVSLS 430
D +IPGG+R+G +++
Sbjct: 508 DNGIIIPGGVRIGTPAMT 525
>Medtr2g006570.4 | serine hydroxymethyltransferase | HC |
chr2:605414-609727 | 20130731
Length = 593
Score = 456 bits (1172), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/438 (52%), Positives = 301/438 (68%), Gaps = 10/438 (2%)
Query: 1 MAMALRRLSSTFTKPPTASSVYRMSSSLPALDNDKSRADWIKQLND-PLETIDPEIADII 59
M + RR S + T +SV S L + +SR ++ D PL+ DP+I +II
Sbjct: 90 MCIKRRRDSESSTITTKRASV--ESDRGDRLLDLESRKAAVRSWGDQPLQVADPDIYEII 147
Query: 60 ELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQ 119
E EK RQ+KG+ELI SENF +VM+A+GS +TNKYSEG PGARYYGGN+YID ETLC
Sbjct: 148 EKEKKRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYGGNQYIDEIETLCC 207
Query: 120 KRALEAFGLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHGYQT-D 178
+RAL AF LDP WGVNVQ S + +NF VYT LL P +RIM LD P GG+ SHGY T +
Sbjct: 208 ERALAAFNLDPKCWGVNVQPYSCTSANFAVYTGLLAPGDRIMGLDTPSGGNTSHGYYTPN 267
Query: 179 TKKISAVSIFFETMPYRLNETTGYIDYDQMEKSAALFRPKLIVAGASAYARLYDYERIRK 238
KK+S SIFFE++ Y++N +G+IDYD++E+ A FRPK+++ G S+Y R +DY R R
Sbjct: 268 GKKVSGASIFFESLAYKINPQSGFIDYDKLEERALDFRPKILICGGSSYPREWDYARFRH 327
Query: 239 VCDKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEI 298
V DK AV+L DMA ISG++AA +PFDY DVVT+TTHKSLRGPRG +IF+RKG K
Sbjct: 328 VADKCGAVLLCDMAQISGIIAAKECVNPFDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPR 387
Query: 299 NK-----KGQEV-LYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQAMTPEFKNYQKQV 352
+ +G E YD+E+KIN AVFP LQGGPHN+ I LA+ALKQ TPE+K Y +QV
Sbjct: 388 KRGILLTQGHESDQYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQV 447
Query: 353 LSNSSAFAQSLIEKGYELVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPG 412
N+ A A +L+ + LV+GGT+NHL+L +LR G+ G EKV E+ HI NK + G
Sbjct: 448 KKNAQALASALLRRKCRLVTGGTDNHLILWDLRPLGLTGKFYEKVCEACHITLNKIAIFG 507
Query: 413 DVSAMIPGGIRMGNVSLS 430
D +IPGG+R+G +++
Sbjct: 508 DNGIIIPGGVRIGTPAMT 525
>Medtr3g073470.1 | serine transhydroxymethyltransferase | HC |
chr3:33129592-33135171 | 20130731
Length = 577
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/393 (54%), Positives = 278/393 (70%), Gaps = 10/393 (2%)
Query: 45 NDPLETIDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARY 104
N PL DPEI I+E EK RQ+KG+ELI SENF +VM+A+GS +TNKYSEG PGA+Y
Sbjct: 120 NQPLSVADPEIFTIMEKEKLRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGAKY 179
Query: 105 YGGNEYIDMAETLCQKRALEAFGLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALD 164
Y GN+YID E LC +RAL AF LD + WGVNVQ S + +NF VYT LL P +RIM LD
Sbjct: 180 YTGNQYIDQLEFLCCERALNAFHLDSSNWGVNVQPYSCTSANFAVYTGLLNPGDRIMGLD 239
Query: 165 LPHGGHLSHGYQTD-TKKISAVSIFFETMPYRLNETTGYIDYDQMEKSAALFRPKLIVAG 223
GGHLSHGY T KK+SA SIFFET+PY++N TGYIDYD++E+ A +RPK+++ G
Sbjct: 240 SASGGHLSHGYYTHGGKKVSAASIFFETLPYKVNPLTGYIDYDKVEEKAVDYRPKILICG 299
Query: 224 ASAYARLYDYERIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRG 283
S+Y R +DY R RK+ DK AV++ DMAHISGLVAA + SPFDY D+VT+TTHKSLRG
Sbjct: 300 GSSYPREWDYARFRKIADKCGAVLMCDMAHISGLVAAREVASPFDYCDIVTSTTHKSLRG 359
Query: 284 PRGAMIFFRKGVKE------INKKGQEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVAL 337
PRG ++F+RKG K +N YD+E+KIN A++P LQGGPHN+ I LA+AL
Sbjct: 360 PRGGIVFYRKGPKPRKQGFVLNHGDDNSNYDFEEKINFALYPSLQGGPHNNHIAALAIAL 419
Query: 338 KQAMTPEFKNYQKQVLSNSSAFAQSLIEKGYELVSGGTENHLVLVNLRNKGIDGSRVEKV 397
KQ TPE+K Y +QV N+ A A +L+++ LV+ GT+NHL+L ++ G+ EKV
Sbjct: 420 KQVATPEYKAYMQQVKRNAQALATALLKRKCRLVTDGTDNHLLLWDITALGLIDRNYEKV 479
Query: 398 LESVHIAANKNTVPGDVSAMIPGGIRMGNVSLS 430
E+ HI NK + G +S+ GG+R+G +++
Sbjct: 480 CEACHITLNKCAIYGSISS---GGVRIGTPAMT 509
>Medtr2g006570.2 | serine hydroxymethyltransferase | HC |
chr2:605420-610991 | 20130731
Length = 422
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/354 (55%), Positives = 254/354 (71%), Gaps = 7/354 (1%)
Query: 84 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFGLDPAKWGVNVQSLSGS 143
M+A+GS +TNKYSEG PGARYYGGN+YID ETLC +RAL AF LDP WGVNVQ S +
Sbjct: 1 MEALGSHLTNKYSEGMPGARYYGGNQYIDEIETLCCERALAAFNLDPKCWGVNVQPYSCT 60
Query: 144 PSNFQVYTALLKPHERIMALDLPHGGHLSHGYQT-DTKKISAVSIFFETMPYRLNETTGY 202
+NF VYT LL P +RIM LD P GG+ SHGY T + KK+S SIFFE++ Y++N +G+
Sbjct: 61 SANFAVYTGLLAPGDRIMGLDTPSGGNTSHGYYTPNGKKVSGASIFFESLAYKINPQSGF 120
Query: 203 IDYDQMEKSAALFRPKLIVAGASAYARLYDYERIRKVCDKQKAVMLADMAHISGLVAAGV 262
IDYD++E+ A FRPK+++ G S+Y R +DY R R V DK AV+L DMA ISG++AA
Sbjct: 121 IDYDKLEERALDFRPKILICGGSSYPREWDYARFRHVADKCGAVLLCDMAQISGIIAAKE 180
Query: 263 IPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK-----KGQEV-LYDYEDKINQA 316
+PFDY DVVT+TTHKSLRGPRG +IF+RKG K + +G E YD+E+KIN A
Sbjct: 181 CVNPFDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLTQGHESDQYDFEEKINFA 240
Query: 317 VFPGLQGGPHNHTITGLAVALKQAMTPEFKNYQKQVLSNSSAFAQSLIEKGYELVSGGTE 376
VFP LQGGPHN+ I LA+ALKQ TPE+K Y +QV N+ A A +L+ + LV+GGT+
Sbjct: 241 VFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKCRLVTGGTD 300
Query: 377 NHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMIPGGIRMGNVSLS 430
NHL+L +LR G+ G EKV E+ HI NK + GD +IPGG+R+G +++
Sbjct: 301 NHLILWDLRPLGLTGKFYEKVCEACHITLNKIAIFGDNGIIIPGGVRIGTPAMT 354
>Medtr2g006570.3 | serine hydroxymethyltransferase | HC |
chr2:605420-609351 | 20130731
Length = 422
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/354 (55%), Positives = 254/354 (71%), Gaps = 7/354 (1%)
Query: 84 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFGLDPAKWGVNVQSLSGS 143
M+A+GS +TNKYSEG PGARYYGGN+YID ETLC +RAL AF LDP WGVNVQ S +
Sbjct: 1 MEALGSHLTNKYSEGMPGARYYGGNQYIDEIETLCCERALAAFNLDPKCWGVNVQPYSCT 60
Query: 144 PSNFQVYTALLKPHERIMALDLPHGGHLSHGYQT-DTKKISAVSIFFETMPYRLNETTGY 202
+NF VYT LL P +RIM LD P GG+ SHGY T + KK+S SIFFE++ Y++N +G+
Sbjct: 61 SANFAVYTGLLAPGDRIMGLDTPSGGNTSHGYYTPNGKKVSGASIFFESLAYKINPQSGF 120
Query: 203 IDYDQMEKSAALFRPKLIVAGASAYARLYDYERIRKVCDKQKAVMLADMAHISGLVAAGV 262
IDYD++E+ A FRPK+++ G S+Y R +DY R R V DK AV+L DMA ISG++AA
Sbjct: 121 IDYDKLEERALDFRPKILICGGSSYPREWDYARFRHVADKCGAVLLCDMAQISGIIAAKE 180
Query: 263 IPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK-----KGQEV-LYDYEDKINQA 316
+PFDY DVVT+TTHKSLRGPRG +IF+RKG K + +G E YD+E+KIN A
Sbjct: 181 CVNPFDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLTQGHESDQYDFEEKINFA 240
Query: 317 VFPGLQGGPHNHTITGLAVALKQAMTPEFKNYQKQVLSNSSAFAQSLIEKGYELVSGGTE 376
VFP LQGGPHN+ I LA+ALKQ TPE+K Y +QV N+ A A +L+ + LV+GGT+
Sbjct: 241 VFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKCRLVTGGTD 300
Query: 377 NHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMIPGGIRMGNVSLS 430
NHL+L +LR G+ G EKV E+ HI NK + GD +IPGG+R+G +++
Sbjct: 301 NHLILWDLRPLGLTGKFYEKVCEACHITLNKIAIFGDNGIIIPGGVRIGTPAMT 354
>Medtr7g108420.1 | serine transhydroxymethyltransferase | HC |
chr7:44148503-44145484 | 20130731
Length = 409
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/362 (54%), Positives = 242/362 (66%), Gaps = 33/362 (9%)
Query: 75 SENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFGLDPAKWG 134
SEN+TS +VM+A+GS TNKYSEG PG RYYGGN ID E LCQ+RAL A LD KWG
Sbjct: 3 SENYTSRAVMEALGSCCTNKYSEGSPGNRYYGGNVNIDEIEILCQERALAAIHLDSNKWG 62
Query: 135 VNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 194
VNVQ LSGSP+N VY A+L+PH+RIM LDL HGGHLSHG+ T T+K+S+ S +F TMPY
Sbjct: 63 VNVQPLSGSPANSAVYDAILEPHDRIMYLDLAHGGHLSHGHMTPTRKVSSTSKYFTTMPY 122
Query: 195 RLNETTGYIDYDQMEKSAALFRPKLIVAGASAYARLYDYERIRKVCDKQKAVMLADMA-- 252
L++ TG IDY + K+A++FRPKLI+AGASAY R DY R+RKVC +++ +
Sbjct: 123 HLDDLTGRIDYHMLAKTASIFRPKLIIAGASAYPRDIDYARMRKVCFDHPTILILIICFS 182
Query: 253 --HISGLVAAGVIPSPFDYADVVTTTTHK-SLRGPRGAMIFFRK-GVKEINKKGQEVLYD 308
+SGLVAA V+ PF+++D+VTTT PRG MIFF+K V I D
Sbjct: 183 VLFLSGLVAASVLADPFEFSDIVTTTRFALKYLCPRGGMIFFKKESVHGI---------D 233
Query: 309 YEDKINQAVFPGLQGGPHNHTITGLAVALKQAMTPEFKNYQKQVLSNSSAFAQSLIEKGY 368
E IN+AV PG QGGPHNHTI GL VA N AFA LIE Y
Sbjct: 234 LESAINKAVLPGRQGGPHNHTIAGLVVA------------------NCRAFANRLIEHQY 275
Query: 369 ELVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMIPGGIRMGNVS 428
+LVSG + NHL+LV+LR GIDG+R EK+L I NKN+VPGD SA +PGGIR+G +
Sbjct: 276 KLVSGDSNNHLILVDLRPSGIDGARGEKILGMASITLNKNSVPGDKSAQVPGGIRIGTPA 335
Query: 429 LS 430
++
Sbjct: 336 MT 337
>Medtr3g062030.1 | serine transhydroxymethyltransferase | HC |
chr3:27965525-27963928 | 20130731
Length = 235
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 65/98 (66%), Gaps = 12/98 (12%)
Query: 288 MIFFRKGVKEINKKGQEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQAMTPEFKN 347
MIFF+K V D E IN A+FPGLQGG NHTI GLAV LK A +P FKN
Sbjct: 1 MIFFKKDVVH--------GVDLESAINNAIFPGLQGGSRNHTIGGLAVCLKYAQSPNFKN 52
Query: 348 YQKQVLSNSSAFAQSLIEKGYELVSGGTENHLVLVNLR 385
YQ QVL A A L+E GY+LVSGG++NHLVLV+LR
Sbjct: 53 YQNQVL----ALANYLVEHGYKLVSGGSDNHLVLVDLR 86
>Medtr1g073580.1 | serine transhydroxymethyltransferase | HC |
chr1:32652851-32655244 | 20130731
Length = 247
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 56/88 (63%), Gaps = 5/88 (5%)
Query: 192 MPYRLNETTGYIDYDQMEKSAALFRPKLIVAGASAYARLYDYERIRKVCDKQKAVMLADM 251
MPYRL+E+T I +EK+AA FRPKLIVA S Y +Y RIRK+ D+ A + DM
Sbjct: 1 MPYRLDESTDLI---GLEKTAAEFRPKLIVA--SVYPPDVNYSRIRKIADEVGAFFMMDM 55
Query: 252 AHISGLVAAGVIPSPFDYADVVTTTTHK 279
HI G VA V+ PF++ D+V T T K
Sbjct: 56 THILGFVAESVLADPFEFCDIVATATLK 83
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 55/80 (68%)
Query: 351 QVLSNSSAFAQSLIEKGYELVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTV 410
+V++N A A L+E GY+LVSGG +NH+VLV+L GIDG+ V+K+L I NKN V
Sbjct: 83 KVVANCIALANRLVEHGYKLVSGGNDNHMVLVDLGQFGIDGALVKKILNMAFINGNKNLV 142
Query: 411 PGDVSAMIPGGIRMGNVSLS 430
GD +A++ GI +G +++
Sbjct: 143 SGDKNALVSNGISIGTKAMT 162
>Medtr7g070020.1 | serine transhydroxymethyltransferase | HC |
chr7:25804678-25802562 | 20130731
Length = 116
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/68 (52%), Positives = 51/68 (75%), Gaps = 7/68 (10%)
Query: 370 LVSGG-------TENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMIPGGI 422
+VSGG ++NHLVLV+LR GIDG+RVEK+L+ I NKN+VPGD SA++PGGI
Sbjct: 1 MVSGGGFSMPRASDNHLVLVDLRPSGIDGARVEKILDMALITLNKNSVPGDKSALVPGGI 60
Query: 423 RMGNVSLS 430
+G+ +++
Sbjct: 61 HIGSPAMT 68