Miyakogusa Predicted Gene
- Lj1g3v0131270.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0131270.1 tr|B9GS30|B9GS30_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_816094 PE=4
SV=1,31.88,1e-17,seg,NULL; bHLH-MYC_N,Transcription factor MYC/MYB
N-terminal; GB DEF: AT3G15240,NULL;
SERINE/THREONI,NODE_58146_length_1311_cov_22.672770.path1.1
(336 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g078750.1 | Serine/Threonine-kinase WNK (WNK)-like protein... 456 e-128
Medtr2g078750.3 | Serine/Threonine-kinase WNK (WNK)-like protein... 333 1e-91
Medtr2g078750.2 | Serine/Threonine-kinase WNK (WNK)-like protein... 261 6e-70
Medtr5g034840.1 | transcription factor-like protein | HC | chr5:... 132 5e-31
Medtr1g018810.1 | transcription factor-like protein | HC | chr1:... 119 4e-27
Medtr1g070180.1 | bHLH transcription factor-like protein | HC | ... 77 2e-14
Medtr7g096650.1 | bHLH transcription factor-like protein | HC | ... 67 3e-11
Medtr2g087295.1 | bHLH transcription factor-like protein | HC | ... 65 8e-11
Medtr7g063470.1 | bHLH transcription factor-like protein | HC | ... 65 8e-11
Medtr7g096650.2 | bHLH transcription factor-like protein | HC | ... 59 8e-09
Medtr7g063470.2 | bHLH transcription factor-like protein | HC | ... 57 3e-08
>Medtr2g078750.1 | Serine/Threonine-kinase WNK (WNK)-like protein |
HC | chr2:32958069-32961213 | 20130731
Length = 415
Score = 456 bits (1174), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/306 (78%), Positives = 251/306 (82%), Gaps = 10/306 (3%)
Query: 1 MVGSGTTSDRSKEAVGMMALHEALRSVCLNSDWNYSVFWTIRPRPRVRGGSGCKVGDDNG 60
MVGSG TSDRSKEAVGMMALHEALR+VCLNSDW YSVFWTIRPRPRVRGG+GCKVGDDNG
Sbjct: 1 MVGSGATSDRSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNG 60
Query: 61 SLMLMWEDGFCRGSDLDCLEEIDGEDPIRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVF 120
SLMLMWEDGFCRG +EEIDGEDP+RK+FSKMSIQLYNYGEGLMGKV SDKCHKWVF
Sbjct: 61 SLMLMWEDGFCRGRS--GVEEIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVF 118
Query: 121 KEPTESEPDISNYWQSSFDALPPEWIDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHF 180
KEPTE EP+ISNYWQSSFDALPPEW DQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHF
Sbjct: 119 KEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHF 178
Query: 181 VLRMRHTFESLRYQSGFYLSQLFXXXXXXXXXXXX-XXXXXXIPISPTPSLLNWSQRPLG 239
VLRMRHTFESL YQSGFYLSQLF IPI P P L NW QRPL
Sbjct: 179 VLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSLPSKPSSTIPIRPPPPLFNWGQRPLS 238
Query: 240 SATSMLSSPGFQH----MGCPQAKDETHMFLMPHAS--EAAKREDMMGE-HENNMKWLNG 292
S +SMLSSP FQ +G PQ KDETHMFLMPHAS E + EDMMGE HE+++KW NG
Sbjct: 239 SPSSMLSSPNFQQHAARLGFPQTKDETHMFLMPHASSHETPRIEDMMGEHHESDIKWPNG 298
Query: 293 YSSFTA 298
S F A
Sbjct: 299 LSFFNA 304
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 283 HENNMKWLNGYSSFTAPDRVAXXXXXXXVDHHQ---AVEYRNS-GGGIYTNVMETFLE 336
HE K SFT P RVA +DHHQ VEYRNS GGG+Y++VMETF+E
Sbjct: 358 HEGGRKMDKFKRSFTLPTRVASSSSSTSMDHHQQQQGVEYRNSEGGGMYSDVMETFME 415
>Medtr2g078750.3 | Serine/Threonine-kinase WNK (WNK)-like protein |
HC | chr2:32958451-32961213 | 20130731
Length = 353
Score = 333 bits (854), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/244 (74%), Positives = 191/244 (78%), Gaps = 10/244 (4%)
Query: 63 MLMWEDGFCRGSDLDCLEEIDGEDPIRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVFKE 122
MLMWEDGFCRG +EEIDGEDP+RK+FSKMSIQLYNYGEGLMGKV SDKCHKWVFKE
Sbjct: 1 MLMWEDGFCRGRS--GVEEIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKE 58
Query: 123 PTESEPDISNYWQSSFDALPPEWIDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVL 182
PTE EP+ISNYWQSSFDALPPEW DQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVL
Sbjct: 59 PTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVL 118
Query: 183 RMRHTFESLRYQSGFYLSQLFXXXXXXXXXXXX-XXXXXXIPISPTPSLLNWSQRPLGSA 241
RMRHTFESL YQSGFYLSQLF IPI P P L NW QRPL S
Sbjct: 119 RMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSLPSKPSSTIPIRPPPPLFNWGQRPLSSP 178
Query: 242 TSMLSSPGFQH----MGCPQAKDETHMFLMPHAS--EAAKREDMMGE-HENNMKWLNGYS 294
+SMLSSP FQ +G PQ KDETHMFLMPHAS E + EDMMGE HE+++KW NG S
Sbjct: 179 SSMLSSPNFQQHAARLGFPQTKDETHMFLMPHASSHETPRIEDMMGEHHESDIKWPNGLS 238
Query: 295 SFTA 298
F A
Sbjct: 239 FFNA 242
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 283 HENNMKWLNGYSSFTAPDRVAXXXXXXXVDHHQ---AVEYRNS-GGGIYTNVMETFLE 336
HE K SFT P RVA +DHHQ VEYRNS GGG+Y++VMETF+E
Sbjct: 296 HEGGRKMDKFKRSFTLPTRVASSSSSTSMDHHQQQQGVEYRNSEGGGMYSDVMETFME 353
>Medtr2g078750.2 | Serine/Threonine-kinase WNK (WNK)-like protein |
HC | chr2:32958935-32961213 | 20130731
Length = 322
Score = 261 bits (668), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 146/201 (72%), Positives = 153/201 (76%), Gaps = 8/201 (3%)
Query: 106 LMGKVTSDKCHKWVFKEPTESEPDISNYWQSSFDALPPEWIDQFESGIQTIAVIQAGHGL 165
LMGKV SDKCHKWVFKEPTE EP+ISNYWQSSFDALPPEW DQFESGIQTIAVIQAGHGL
Sbjct: 11 LMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGL 70
Query: 166 LQLGSCKIIPEDLHFVLRMRHTFESLRYQSGFYLSQLFXXXXXXXXXXXX-XXXXXXIPI 224
LQLGSCKIIPEDLHFVLRMRHTFESL YQSGFYLSQLF IPI
Sbjct: 71 LQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSLPSKPSSTIPI 130
Query: 225 SPTPSLLNWSQRPLGSATSMLSSPGFQH----MGCPQAKDETHMFLMPHAS--EAAKRED 278
P P L NW QRPL S +SMLSSP FQ +G PQ KDETHMFLMPHAS E + ED
Sbjct: 131 RPPPPLFNWGQRPLSSPSSMLSSPNFQQHAARLGFPQTKDETHMFLMPHASSHETPRIED 190
Query: 279 MMGE-HENNMKWLNGYSSFTA 298
MMGE HE+++KW NG S F A
Sbjct: 191 MMGEHHESDIKWPNGLSFFNA 211
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 283 HENNMKWLNGYSSFTAPDRVAXXXXXXXVDHHQ---AVEYRNS-GGGIYTNVMETFLE 336
HE K SFT P RVA +DHHQ VEYRNS GGG+Y++VMETF+E
Sbjct: 265 HEGGRKMDKFKRSFTLPTRVASSSSSTSMDHHQQQQGVEYRNSEGGGMYSDVMETFME 322
>Medtr5g034840.1 | transcription factor-like protein | HC |
chr5:15137807-15135127 | 20130731
Length = 362
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 110/205 (53%), Gaps = 25/205 (12%)
Query: 20 LHEALRSVCL--NSDWNYSVFWTIRPR----PRVRG-GSGCKVGDDNGSLMLMWEDGFCR 72
L LRS+C+ NS W Y+VFW I PR P+ G G+ + + + +L+WEDGFC
Sbjct: 14 LQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCN 73
Query: 73 GSDLDCLEEIDGEDPIRKS------------------FSKMSIQLYNYGEGLMGKVTSDK 114
+ E G+ P S F KMS ++YNYGEGL+GKV +D
Sbjct: 74 FAASAAPEINTGDCPSSSSVYGNCELIQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADH 133
Query: 115 CHKWVFKEPTESEPDISNYWQSSFDALPPEWIDQFESGIQTIAVIQAGHGLLQLGSCKII 174
HKW++KEP + E + + W +S D+ P W QF SGI+TIA+I G++QLG+ +
Sbjct: 134 SHKWIYKEPNDQEINFLSAWHNSADSHPRTWEAQFLSGIKTIALIAVREGVVQLGAVHKV 193
Query: 175 PEDLHFVLRMRHTFESLRYQSGFYL 199
EDL +V+ +R F + G L
Sbjct: 194 IEDLSYVVLLRKKFSYIESIPGVLL 218
>Medtr1g018810.1 | transcription factor-like protein | HC |
chr1:5530162-5532703 | 20130731
Length = 321
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 103/196 (52%), Gaps = 22/196 (11%)
Query: 20 LHEALRSVC------LNSDWNYSVFWTIRPR----PRVR-GGSGCKVGDDNG-SLMLMWE 67
L LR++C +S W Y+VFW + PR PR GG+ N + +++WE
Sbjct: 12 LQHTLRNLCSFPTSSTSSKWVYAVFWRVVPRIFPPPRWEFGGTSLDRSKGNKRNWIIVWE 71
Query: 68 DGFCRGSDLD-----CLEEIDGEDPIRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVFKE 122
DGFC ++ + CL E G D F KMS ++Y+YGEGL+GKV +D HKWV+ +
Sbjct: 72 DGFCDFNECEQRKSGCLNERFGAD----VFFKMSHEVYSYGEGLVGKVAADNGHKWVYSD 127
Query: 123 PTES-EPDISNYWQSSFDALPPEWIDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFV 181
E + W +S D P W Q SGIQTIAVI GL+QLGS I EDL V
Sbjct: 128 TQNGCEANYVGPWNASIDHQPRAWEFQLNSGIQTIAVIAVKEGLVQLGSFDKIAEDLDLV 187
Query: 182 LRMRHTFESLRYQSGF 197
L ++ F L+ G
Sbjct: 188 LNIQRKFSYLQTIPGL 203
>Medtr1g070180.1 | bHLH transcription factor-like protein | HC |
chr1:30860903-30866937 | 20130731
Length = 666
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 53/196 (27%)
Query: 20 LHEALRSVCLNSDWNYSVFWTIRPRPRVRGGSGCKVGDDNGSLMLMWEDGF------CRG 73
LH+ LRS+CL++DW Y++FW ++ R ++L WED + C
Sbjct: 5 LHQLLRSLCLDTDWKYAIFWKLQHCAR---------------MILTWEDAYYDNPDNCDS 49
Query: 74 SDLDC----LEEID----GEDPIRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVF--KEP 123
S C LE+I DP+ S +KMS +Y+ GEG++G+V H+W+ +
Sbjct: 50 SQSMCSQNTLEQICVGDFSHDPLGLSVAKMSYHVYSLGEGIVGQVAVTGKHQWICADNQV 109
Query: 124 TESEPDISNYWQSSFDALPPEWIDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLR 183
T S P A+PP G++QLGS + ED+ FV
Sbjct: 110 TSSSPSFKTIV---VVAVPP-------------------LGVVQLGSLNKVGEDMGFVTH 147
Query: 184 MRHTFESLRYQSGFYL 199
+R F S R + YL
Sbjct: 148 IRSLFLSTRDHTLGYL 163
>Medtr7g096650.1 | bHLH transcription factor-like protein | HC |
chr7:38776810-38769985 | 20130731
Length = 665
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 26/181 (14%)
Query: 20 LHEALRSVCLNSDWNYSVFWTIR-PRPRVRGGSGCKVGDDNGSLMLMWEDGFCRGSDLDC 78
LH+ LRS+C N+ WNY++FW ++ P + DN E+ +C+ +
Sbjct: 5 LHQLLRSLCFNTQWNYAIFWKLKHSAPLILTLEDAYY--DNSDYFDASENKYCQKT---- 58
Query: 79 LEEIDG----EDPIRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVFKEPTESEPDISNYW 134
LE+I+G D + + +KM Y G+G++G+V H+W+ +
Sbjct: 59 LEQIEGGKFSHDALGLAVAKMRYNAYPLGQGIVGQVAVTGKHQWICADNN---------- 108
Query: 135 QSSFDALPPEWID----QFESGIQTI-AVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFE 189
Q + L E++D QF +GI+TI V G++QLGS + ED V +R+ F
Sbjct: 109 QVTSSGLSFEFVDGWQSQFSAGIRTIVVVSVVPLGVVQLGSLIKVNEDTGVVNHIRNLFL 168
Query: 190 S 190
S
Sbjct: 169 S 169
>Medtr2g087295.1 | bHLH transcription factor-like protein | HC |
chr2:36707764-36700956 | 20130731
Length = 881
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 66/212 (31%)
Query: 20 LHEALRSVC-LNSDWNYSVFWTIRPRPRVRGGSGCKVGDDNGSLMLMWEDGFCRGSDLDC 78
L EAL+++C N+ W+Y+VFW I GC N S +L+WE+ +
Sbjct: 5 LKEALKTLCGRNNQWSYAVFWKI----------GC-----NNSKLLIWEECYYEPVSCPS 49
Query: 79 LEEIDG---------------------------EDPIRKSFSKMSIQ--LYNYGEGLMGK 109
IDG ED + +KM++ + GEG++G+
Sbjct: 50 PHGIDGMSNFPNPNGEGSWFSSEFQSPHLGIQEEDKVSSLVNKMTVNNLVIVAGEGIIGR 109
Query: 110 VTSDKCHKWVFKEPTESEPDISNYWQSSFDALPPEWI----DQFESGIQTIAVIQA-GHG 164
H+W+ ++++ + +A PPE DQF +G+QT+AVI HG
Sbjct: 110 SAFTNSHEWIL---------LNDFAK---NAYPPEVYAEMHDQFSAGMQTVAVIPVLPHG 157
Query: 165 LLQLGSCKIIPEDLHFVLRMRHTFESLRYQSG 196
++Q+GS I E++ FV H +SL Q G
Sbjct: 158 VVQIGSFLPIMENMGFV----HEVKSLILQLG 185
>Medtr7g063470.1 | bHLH transcription factor-like protein | HC |
chr7:23134218-23128246 | 20130731
Length = 682
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 77/181 (42%), Gaps = 21/181 (11%)
Query: 19 ALHEALRSVCLNSDWNYSVFWTIRPRPRVRGGSGCKVGDDNGSLMLMWEDGFCRGSDLDC 78
++ + L+ C W+Y+VFW + + N L MW D D D
Sbjct: 5 SITQLLKGFCDTMQWHYAVFWKLNHLSPMTLTWENAYQKSNQPLGSMWGDISFESPD-DV 63
Query: 79 LEEIDGED-----PIRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVFKEPTESEPDISNY 133
+G D +R +MS + Y+ GEG +GK+ K H WV E +
Sbjct: 64 YSSREGTDDSGDYSVRLHMIEMSRRKYSLGEGAVGKLALAKDHFWVSCE---------DI 114
Query: 134 WQSSFDA-----LPPEWIDQFESGIQTIAVIQA-GHGLLQLGSCKIIPEDLHFVLRMRHT 187
+ FD P EW+ QF SGI+TI ++ G+LQ S + EDL F+ ++
Sbjct: 115 FTGKFDTSLIPECPDEWLLQFASGIKTIVLVPVLPQGVLQFASFNSVAEDLEFITNIKEK 174
Query: 188 F 188
F
Sbjct: 175 F 175
>Medtr7g096650.2 | bHLH transcription factor-like protein | HC |
chr7:38776810-38769985 | 20130731
Length = 645
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 20 LHEALRSVCLNSDWNYSVFWTIR-PRPRVRGGSGCKVGDDNGSLMLMWEDGFCRGSDLDC 78
LH+ LRS+C N+ WNY++FW ++ P + DN E+ +C+ +
Sbjct: 5 LHQLLRSLCFNTQWNYAIFWKLKHSAPLILTLEDAYY--DNSDYFDASENKYCQKT---- 58
Query: 79 LEEIDG----EDPIRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVFKEPTESEP-----D 129
LE+I+G D + + +KM Y G+G++G+V H+W+ + + +
Sbjct: 59 LEQIEGGKFSHDALGLAVAKMRYNAYPLGQGIVGQVAVTGKHQWICADNNQVTSSGLSFE 118
Query: 130 ISNYWQSSFDA 140
+ WQS F A
Sbjct: 119 FVDGWQSQFSA 129
>Medtr7g063470.2 | bHLH transcription factor-like protein | HC |
chr7:23134218-23128393 | 20130731
Length = 632
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 84 GEDPIRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVFKEPTESEPDISNYWQSSFDA--- 140
G+ +R +MS + Y+ GEG +GK+ K H WV E + + FD
Sbjct: 24 GDYSVRLHMIEMSRRKYSLGEGAVGKLALAKDHFWVSCE---------DIFTGKFDTSLI 74
Query: 141 --LPPEWIDQFESGIQTIAVIQA-GHGLLQLGSCKIIPEDLHFVLRMRHTF 188
P EW+ QF SGI+TI ++ G+LQ S + EDL F+ ++ F
Sbjct: 75 PECPDEWLLQFASGIKTIVLVPVLPQGVLQFASFNSVAEDLEFITNIKEKF 125