Miyakogusa Predicted Gene
- Lj1g3v0131170.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0131170.2 Non Characterized Hit- tr|I1JAN3|I1JAN3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26783 PE,62.96,5e-19,
,CUFF.25286.2
(75 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g007260.2 | undecaprenyl pyrophosphate synthetase family p... 95 2e-20
Medtr5g007260.1 | undecaprenyl pyrophosphate synthetase family p... 95 2e-20
Medtr5g007330.1 | undecaprenyl pyrophosphate synthetase family p... 64 2e-11
>Medtr5g007260.2 | undecaprenyl pyrophosphate synthetase family
protein | HC | chr5:1263279-1268904 | 20130731
Length = 253
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
Query: 2 VNFRDEA-------LKLSNCFVTLLWYFLQIIVSTWCFVSAMVSLFESYFISDGVLKKYK 54
++FRD A L + N + LLWYFLQIIVS W ++S + +LFESYFIS GV KKYK
Sbjct: 1 MDFRDVAHNLYHSILAIRNLGLQLLWYFLQIIVSAWYYISVVANLFESYFISYGVFKKYK 60
Query: 55 SVHIGKLRYLAIVIESEDANQ 75
S+ I KLRYLAIVIESEDA+Q
Sbjct: 61 SLPIAKLRYLAIVIESEDAHQ 81
>Medtr5g007260.1 | undecaprenyl pyrophosphate synthetase family
protein | HC | chr5:1263272-1268904 | 20130731
Length = 253
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
Query: 2 VNFRDEA-------LKLSNCFVTLLWYFLQIIVSTWCFVSAMVSLFESYFISDGVLKKYK 54
++FRD A L + N + LLWYFLQIIVS W ++S + +LFESYFIS GV KKYK
Sbjct: 1 MDFRDVAHNLYHSILAIRNLGLQLLWYFLQIIVSAWYYISVVANLFESYFISYGVFKKYK 60
Query: 55 SVHIGKLRYLAIVIESEDANQ 75
S+ I KLRYLAIVIESEDA+Q
Sbjct: 61 SLPIAKLRYLAIVIESEDAHQ 81
>Medtr5g007330.1 | undecaprenyl pyrophosphate synthetase family
protein, putative | HC | chr5:1290910-1294961 |
20130731
Length = 270
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 19/81 (23%)
Query: 2 VNFRDEA-------LKLSNCFVTLLWYFLQIIVSTWCFVSAMVSLFESYFISDGVLKKYK 54
++FRD A L + N + LLWYFLQ IVS + YFIS V K+YK
Sbjct: 1 MDFRDIAHNFYHFILAIGNLVLQLLWYFLQNIVSAY------------YFISYRVFKQYK 48
Query: 55 SVHIGKLRYLAIVIESEDANQ 75
S+ I KL+YLAIVIESEDA+Q
Sbjct: 49 SIPIAKLQYLAIVIESEDAHQ 69