Miyakogusa Predicted Gene

Lj1g3v0131170.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0131170.2 Non Characterized Hit- tr|I1JAN3|I1JAN3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26783 PE,62.96,5e-19,
,CUFF.25286.2
         (75 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g007260.2 | undecaprenyl pyrophosphate synthetase family p...    95   2e-20
Medtr5g007260.1 | undecaprenyl pyrophosphate synthetase family p...    95   2e-20
Medtr5g007330.1 | undecaprenyl pyrophosphate synthetase family p...    64   2e-11

>Medtr5g007260.2 | undecaprenyl pyrophosphate synthetase family
          protein | HC | chr5:1263279-1268904 | 20130731
          Length = 253

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/81 (61%), Positives = 60/81 (74%), Gaps = 7/81 (8%)

Query: 2  VNFRDEA-------LKLSNCFVTLLWYFLQIIVSTWCFVSAMVSLFESYFISDGVLKKYK 54
          ++FRD A       L + N  + LLWYFLQIIVS W ++S + +LFESYFIS GV KKYK
Sbjct: 1  MDFRDVAHNLYHSILAIRNLGLQLLWYFLQIIVSAWYYISVVANLFESYFISYGVFKKYK 60

Query: 55 SVHIGKLRYLAIVIESEDANQ 75
          S+ I KLRYLAIVIESEDA+Q
Sbjct: 61 SLPIAKLRYLAIVIESEDAHQ 81


>Medtr5g007260.1 | undecaprenyl pyrophosphate synthetase family
          protein | HC | chr5:1263272-1268904 | 20130731
          Length = 253

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/81 (61%), Positives = 60/81 (74%), Gaps = 7/81 (8%)

Query: 2  VNFRDEA-------LKLSNCFVTLLWYFLQIIVSTWCFVSAMVSLFESYFISDGVLKKYK 54
          ++FRD A       L + N  + LLWYFLQIIVS W ++S + +LFESYFIS GV KKYK
Sbjct: 1  MDFRDVAHNLYHSILAIRNLGLQLLWYFLQIIVSAWYYISVVANLFESYFISYGVFKKYK 60

Query: 55 SVHIGKLRYLAIVIESEDANQ 75
          S+ I KLRYLAIVIESEDA+Q
Sbjct: 61 SLPIAKLRYLAIVIESEDAHQ 81


>Medtr5g007330.1 | undecaprenyl pyrophosphate synthetase family
          protein, putative | HC | chr5:1290910-1294961 |
          20130731
          Length = 270

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 19/81 (23%)

Query: 2  VNFRDEA-------LKLSNCFVTLLWYFLQIIVSTWCFVSAMVSLFESYFISDGVLKKYK 54
          ++FRD A       L + N  + LLWYFLQ IVS +            YFIS  V K+YK
Sbjct: 1  MDFRDIAHNFYHFILAIGNLVLQLLWYFLQNIVSAY------------YFISYRVFKQYK 48

Query: 55 SVHIGKLRYLAIVIESEDANQ 75
          S+ I KL+YLAIVIESEDA+Q
Sbjct: 49 SIPIAKLQYLAIVIESEDAHQ 69