Miyakogusa Predicted Gene

Lj1g3v0130100.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0130100.1 Non Characterized Hit- tr|K0SJM3|K0SJM3_THAOC
Uncharacterized protein (Fragment) OS=Thalassiosira
oc,29.9,0.0000001,seg,NULL,CUFF.25267.1
         (389 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g006230.1 | Serine/Threonine-kinase STN7, related protein,...   491   e-139
Medtr5g006230.2 | Serine/Threonine-kinase STN7, related protein,...   399   e-111

>Medtr5g006230.1 | Serine/Threonine-kinase STN7, related protein,
           putative | HC | chr5:825158-829672 | 20130731
          Length = 386

 Score =  491 bits (1263), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 247/348 (70%), Positives = 276/348 (79%), Gaps = 13/348 (3%)

Query: 42  LISDSNSFQVGKPIGSYGFMNVTTVFXXXXXXXXXXXXDFKGLKTQDVEEGSVKIRLYEG 101
            I++S+ FQVG+PIG+YGFMNVTT                 GLKTQDV+EGSVKIRLYEG
Sbjct: 32  FITNSDWFQVGRPIGNYGFMNVTTSSTDQYSLG-------GGLKTQDVQEGSVKIRLYEG 84

Query: 102 RVSQGPLRGTPVVFKVYPXXXXXXXXXXXXXXNELNSHVFLQSSSKGISEHLMXXXXXXX 161
           RVSQGPL+ TPV+FKVYP              NELNSH+FLQSSSKGIS+HLM       
Sbjct: 85  RVSQGPLKQTPVLFKVYPGTRAGGVVADMMAANELNSHMFLQSSSKGISQHLMLLLGGFE 144

Query: 162 XXXXXXXXAFRDVGRYTAADYAKFASEKVSRDRASGEPSSWNRYERVQTIKRRQFFIIKL 221
                   AFRD G+ TAADYAK ASEKVS+       SSWN +ER Q++KRR+ FIIKL
Sbjct: 145 TTTGEQWLAFRDYGKSTAADYAKVASEKVSK------LSSWNSFERGQSMKRRRRFIIKL 198

Query: 222 LHGAMRGLAYMHDHERLHQSLGPFSVALNTISEREARYLIPRLRDLAFSVDIRYSELENS 281
           L GA+RGLAYMHDH+RLHQSLGPFSV+LNTISE EA YLIPRLRDLAFSV +RYSELE+S
Sbjct: 199 LQGALRGLAYMHDHDRLHQSLGPFSVSLNTISESEAPYLIPRLRDLAFSVSVRYSELEDS 258

Query: 282 GSLADGLWARASRAGAFTYLEKRAFGIADDIYEAGLLFAYLAFVPFCEAGVTDGLSLQRL 341
           G L +GLWARAS A AFTYLEKRAFGIADDIYEAGLLFAYLAFVPFCEAGV DGLSLQRL
Sbjct: 259 GPLTEGLWARASAASAFTYLEKRAFGIADDIYEAGLLFAYLAFVPFCEAGVMDGLSLQRL 318

Query: 342 LENTFQLDLEATREYCIADDRLVDGVEFLDLGNGAGWEIIQAMLNADF 389
           LENTF+LDLEATREYCIADD+LV+ +EFLDLG+GAGWE++QAMLNADF
Sbjct: 319 LENTFRLDLEATREYCIADDKLVNAIEFLDLGDGAGWELLQAMLNADF 366


>Medtr5g006230.2 | Serine/Threonine-kinase STN7, related protein,
           putative | HC | chr5:825158-829672 | 20130731
          Length = 274

 Score =  399 bits (1024), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 197/256 (76%), Positives = 218/256 (85%), Gaps = 6/256 (2%)

Query: 134 NELNSHVFLQSSSKGISEHLMXXXXXXXXXXXXXXXAFRDVGRYTAADYAKFASEKVSRD 193
           NELNSH+FLQSSSKGIS+HLM               AFRD G+ TAADYAK ASEKVS+ 
Sbjct: 5   NELNSHMFLQSSSKGISQHLMLLLGGFETTTGEQWLAFRDYGKSTAADYAKVASEKVSK- 63

Query: 194 RASGEPSSWNRYERVQTIKRRQFFIIKLLHGAMRGLAYMHDHERLHQSLGPFSVALNTIS 253
                 SSWN +ER Q++KRR+ FIIKLL GA+RGLAYMHDH+RLHQSLGPFSV+LNTIS
Sbjct: 64  -----LSSWNSFERGQSMKRRRRFIIKLLQGALRGLAYMHDHDRLHQSLGPFSVSLNTIS 118

Query: 254 EREARYLIPRLRDLAFSVDIRYSELENSGSLADGLWARASRAGAFTYLEKRAFGIADDIY 313
           E EA YLIPRLRDLAFSV +RYSELE+SG L +GLWARAS A AFTYLEKRAFGIADDIY
Sbjct: 119 ESEAPYLIPRLRDLAFSVSVRYSELEDSGPLTEGLWARASAASAFTYLEKRAFGIADDIY 178

Query: 314 EAGLLFAYLAFVPFCEAGVTDGLSLQRLLENTFQLDLEATREYCIADDRLVDGVEFLDLG 373
           EAGLLFAYLAFVPFCEAGV DGLSLQRLLENTF+LDLEATREYCIADD+LV+ +EFLDLG
Sbjct: 179 EAGLLFAYLAFVPFCEAGVMDGLSLQRLLENTFRLDLEATREYCIADDKLVNAIEFLDLG 238

Query: 374 NGAGWEIIQAMLNADF 389
           +GAGWE++QAMLNADF
Sbjct: 239 DGAGWELLQAMLNADF 254