Miyakogusa Predicted Gene

Lj1g3v0130050.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0130050.1 Non Characterized Hit- tr|I3SGG9|I3SGG9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,92.75,0,SUBFAMILY
NOT NAMED,NULL; HEXAPRENYLDIHYDROXYBENZOATE
METHYLTRANSFERASE,Ubiquinone biosynthesis
O-me,NODE_62283_length_945_cov_25.612698.path1.1
         (276 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g091910.1 | 3-demethylubiquinone-9 3-methyltransferase | H...   471   e-133

>Medtr5g091910.1 | 3-demethylubiquinone-9 3-methyltransferase | HC |
           chr5:40110525-40115950 | 20130731
          Length = 303

 Score =  471 bits (1213), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/300 (79%), Positives = 252/300 (84%), Gaps = 24/300 (8%)

Query: 1   MNHLRNLN-GIT-NRRILSN---------ARCFSGAAKEH-------------SSLNRNE 36
           MNHLRNLN GIT +  IL N          + FS ++                SSLNRNE
Sbjct: 4   MNHLRNLNNGITIHHHILRNRFHPLFFNYPKFFSDSSLPQQPTTPHVQQPPPPSSLNRNE 63

Query: 37  LAKFAAIAETWWDSEGPFKPLHAMNPTRLAFVRSVLCRHFKKDPYSAKPLEGLKIADVGC 96
           LAKFAAIAETWWDSEGPFKPLH MNPTRLAFVRS LCRHFKKDPYSAKPLEGLKI DVGC
Sbjct: 64  LAKFAAIAETWWDSEGPFKPLHVMNPTRLAFVRSALCRHFKKDPYSAKPLEGLKIVDVGC 123

Query: 97  GGGILSEPLARLGATVTGVDAVEKNIKIARLHADLDPTTSTIEYCCTTAETLVEEGRKFD 156
           GGGILSEPLAR+GATVTGVDAVEKNI IARLHA+ DPTTSTIE+CCTTAE LVEEGRKFD
Sbjct: 124 GGGILSEPLARMGATVTGVDAVEKNINIARLHAESDPTTSTIEFCCTTAEKLVEEGRKFD 183

Query: 157 AVMALEVIEHVADPAEFCKSLSALTISDGATVISTINRSMRAYATAIVAAEYILRWLPRG 216
           AVMALEVIEHVA+PAEFCKSL+ALTI DGAT+ISTINRSMRAYATAIVAAEYILRWLP G
Sbjct: 184 AVMALEVIEHVAEPAEFCKSLAALTIPDGATIISTINRSMRAYATAIVAAEYILRWLPTG 243

Query: 217 THDWSSFLTPGELVLILQRAGINVEEMAGFVYNPLTGQWSLSDDIGVNFIAFGTKTKSTE 276
           TH+WS FLTP ELVLILQRAGINVEEMAGF YNP+TG+WSLSDDI VNFIA GTK  +TE
Sbjct: 244 THEWSKFLTPEELVLILQRAGINVEEMAGFAYNPVTGRWSLSDDISVNFIAMGTKANNTE 303