Miyakogusa Predicted Gene

Lj1g3v0129780.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0129780.1 Non Characterized Hit- tr|K4DDC0|K4DDC0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,63.01,4e-18,PARG_cat,Poly(ADP-ribose)
glycohydrolase,NODE_57825_length_377_cov_35.822281.path1.1
         (73 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g029520.1 | poly(ADP-ribose) glycohydrolase | HC | chr3:92...   130   3e-31

>Medtr3g029520.1 | poly(ADP-ribose) glycohydrolase | HC |
           chr3:9287704-9281872 | 20130731
          Length = 529

 Score =  130 bits (326), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 62/73 (84%), Positives = 64/73 (87%)

Query: 1   MPQGVVSFERKVLPLEDDYIHISYPNADVWSTSIIPLCRFEVHSSGLIEDQLSEAVEVDF 60
           MP+GVVSFERKVLP EDD IHISYPNA  WSTS+ PLCRFEV SSGLIED  SE VEVDF
Sbjct: 208 MPKGVVSFERKVLPWEDDCIHISYPNASFWSTSVKPLCRFEVKSSGLIEDHSSETVEVDF 267

Query: 61  ANEYLGGGALRRG 73
           ANEYLGGGALRRG
Sbjct: 268 ANEYLGGGALRRG 280