Miyakogusa Predicted Gene
- Lj1g3v0117780.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0117780.1 Non Characterized Hit- tr|I1JAP3|I1JAP3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.58269
PE,62.5,8e-19,seg,NULL,TC70280.path2.1
(104 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr0001s0570.6 | RING/FYVE/PHD zinc finger protein, putative |... 59 9e-10
Medtr0001s0570.1 | RING/FYVE/PHD zinc finger protein, putative |... 59 9e-10
Medtr0001s0570.2 | RING/FYVE/PHD zinc finger protein, putative |... 59 1e-09
Medtr0001s0570.4 | RING/FYVE/PHD zinc finger protein, putative |... 59 1e-09
Medtr0001s0570.5 | RING/FYVE/PHD zinc finger protein, putative |... 58 2e-09
Medtr0001s0570.3 | RING/FYVE/PHD zinc finger protein, putative |... 58 2e-09
Medtr5g007180.2 | RING/FYVE/PHD zinc finger protein, putative | ... 54 2e-08
Medtr5g007180.1 | RING/FYVE/PHD zinc finger protein, putative | ... 54 3e-08
Medtr5g007180.3 | RING/FYVE/PHD zinc finger protein, putative | ... 54 3e-08
>Medtr0001s0570.6 | RING/FYVE/PHD zinc finger protein, putative | HC |
scaffold0001:430833-437206 | 20130731
Length = 1418
Score = 58.9 bits (141), Expect = 9e-10, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 56/121 (46%), Gaps = 26/121 (21%)
Query: 1 MPLKGLH--ADRFRDGIPNLELALGGETKXXXXXXXXXXXXKGMLPFLVGAVERKNN--- 55
M LKG H D+F GIP LELALGGE + +G PF G ++K+N
Sbjct: 1307 MSLKGPHWSGDQFEVGIPRLELALGGEME---------QSLEGTRPFFAGIADKKSNQEK 1357
Query: 56 PADSLADEQED----AAXXXXXXXXXXXNKEHKK--------VDGNHVNTPFLLFGRFTD 103
D L EQED AA NKE K D +H+N+ LFGRFTD
Sbjct: 1358 TPDCLEAEQEDGDSVAASLSLSLSFPSSNKEPTKHASKDEHLPDVHHMNSSLHLFGRFTD 1417
Query: 104 K 104
K
Sbjct: 1418 K 1418
>Medtr0001s0570.1 | RING/FYVE/PHD zinc finger protein, putative | HC |
scaffold0001:430833-437206 | 20130731
Length = 1418
Score = 58.9 bits (141), Expect = 9e-10, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 56/121 (46%), Gaps = 26/121 (21%)
Query: 1 MPLKGLH--ADRFRDGIPNLELALGGETKXXXXXXXXXXXXKGMLPFLVGAVERKNN--- 55
M LKG H D+F GIP LELALGGE + +G PF G ++K+N
Sbjct: 1307 MSLKGPHWSGDQFEVGIPRLELALGGEME---------QSLEGTRPFFAGIADKKSNQEK 1357
Query: 56 PADSLADEQED----AAXXXXXXXXXXXNKEHKK--------VDGNHVNTPFLLFGRFTD 103
D L EQED AA NKE K D +H+N+ LFGRFTD
Sbjct: 1358 TPDCLEAEQEDGDSVAASLSLSLSFPSSNKEPTKHASKDEHLPDVHHMNSSLHLFGRFTD 1417
Query: 104 K 104
K
Sbjct: 1418 K 1418
>Medtr0001s0570.2 | RING/FYVE/PHD zinc finger protein, putative | HC |
scaffold0001:430905-437206 | 20130731
Length = 1394
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 56/121 (46%), Gaps = 26/121 (21%)
Query: 1 MPLKGLH--ADRFRDGIPNLELALGGETKXXXXXXXXXXXXKGMLPFLVGAVERKNN--- 55
M LKG H D+F GIP LELALGGE + +G PF G ++K+N
Sbjct: 1283 MSLKGPHWSGDQFEVGIPRLELALGGEME---------QSLEGTRPFFAGIADKKSNQEK 1333
Query: 56 PADSLADEQED----AAXXXXXXXXXXXNKEHKK--------VDGNHVNTPFLLFGRFTD 103
D L EQED AA NKE K D +H+N+ LFGRFTD
Sbjct: 1334 TPDCLEAEQEDGDSVAASLSLSLSFPSSNKEPTKHASKDEHLPDVHHMNSSLHLFGRFTD 1393
Query: 104 K 104
K
Sbjct: 1394 K 1394
>Medtr0001s0570.4 | RING/FYVE/PHD zinc finger protein, putative | HC |
scaffold0001:430905-437206 | 20130731
Length = 1394
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 56/121 (46%), Gaps = 26/121 (21%)
Query: 1 MPLKGLH--ADRFRDGIPNLELALGGETKXXXXXXXXXXXXKGMLPFLVGAVERKNN--- 55
M LKG H D+F GIP LELALGGE + +G PF G ++K+N
Sbjct: 1283 MSLKGPHWSGDQFEVGIPRLELALGGEME---------QSLEGTRPFFAGIADKKSNQEK 1333
Query: 56 PADSLADEQED----AAXXXXXXXXXXXNKEHKK--------VDGNHVNTPFLLFGRFTD 103
D L EQED AA NKE K D +H+N+ LFGRFTD
Sbjct: 1334 TPDCLEAEQEDGDSVAASLSLSLSFPSSNKEPTKHASKDEHLPDVHHMNSSLHLFGRFTD 1393
Query: 104 K 104
K
Sbjct: 1394 K 1394
>Medtr0001s0570.5 | RING/FYVE/PHD zinc finger protein, putative | HC |
scaffold0001:431394-437206 | 20130731
Length = 1231
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 56/121 (46%), Gaps = 26/121 (21%)
Query: 1 MPLKGLH--ADRFRDGIPNLELALGGETKXXXXXXXXXXXXKGMLPFLVGAVERKNN--- 55
M LKG H D+F GIP LELALGGE + +G PF G ++K+N
Sbjct: 1120 MSLKGPHWSGDQFEVGIPRLELALGGEME---------QSLEGTRPFFAGIADKKSNQEK 1170
Query: 56 PADSLADEQED----AAXXXXXXXXXXXNKEHKK--------VDGNHVNTPFLLFGRFTD 103
D L EQED AA NKE K D +H+N+ LFGRFTD
Sbjct: 1171 TPDCLEAEQEDGDSVAASLSLSLSFPSSNKEPTKHASKDEHLPDVHHMNSSLHLFGRFTD 1230
Query: 104 K 104
K
Sbjct: 1231 K 1231
>Medtr0001s0570.3 | RING/FYVE/PHD zinc finger protein, putative | HC |
scaffold0001:431394-437206 | 20130731
Length = 1231
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 56/121 (46%), Gaps = 26/121 (21%)
Query: 1 MPLKGLH--ADRFRDGIPNLELALGGETKXXXXXXXXXXXXKGMLPFLVGAVERKNN--- 55
M LKG H D+F GIP LELALGGE + +G PF G ++K+N
Sbjct: 1120 MSLKGPHWSGDQFEVGIPRLELALGGEME---------QSLEGTRPFFAGIADKKSNQEK 1170
Query: 56 PADSLADEQED----AAXXXXXXXXXXXNKEHKK--------VDGNHVNTPFLLFGRFTD 103
D L EQED AA NKE K D +H+N+ LFGRFTD
Sbjct: 1171 TPDCLEAEQEDGDSVAASLSLSLSFPSSNKEPTKHASKDEHLPDVHHMNSSLHLFGRFTD 1230
Query: 104 K 104
K
Sbjct: 1231 K 1231
>Medtr5g007180.2 | RING/FYVE/PHD zinc finger protein, putative | HC |
chr5:1231178-1237896 | 20130731
Length = 1464
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 55/113 (48%), Gaps = 14/113 (12%)
Query: 1 MPLKGLHADRFRDGIPNLELALGGETKXXXXXXXXXXXXKGMLPFLVGAVERKNNPADSL 60
M +KG+H + IPNL LALG ET+ KGMLPFLVG E+KNN AD
Sbjct: 1357 MAMKGIHERE--NVIPNLNLALGDETEMPPSPPPAGP--KGMLPFLVGPAEKKNNHADRP 1412
Query: 61 ADEQEDAAXXXXXXXXXXXNKEHKKV--------DGNHVNTPFLLFG-RFTDK 104
D+ A+ N E K DG+ + FLLFG R+TDK
Sbjct: 1413 EDDVAAAS-LSLSLSFPSSNMEQTKASSKAELLPDGHRPSPSFLLFGRRYTDK 1464
>Medtr5g007180.1 | RING/FYVE/PHD zinc finger protein, putative | HC |
chr5:1231178-1237896 | 20130731
Length = 1457
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 55/113 (48%), Gaps = 14/113 (12%)
Query: 1 MPLKGLHADRFRDGIPNLELALGGETKXXXXXXXXXXXXKGMLPFLVGAVERKNNPADSL 60
M +KG+H + IPNL LALG ET+ KGMLPFLVG E+KNN AD
Sbjct: 1350 MAMKGIHERE--NVIPNLNLALGDETEMPPSPPPAGP--KGMLPFLVGPAEKKNNHADRP 1405
Query: 61 ADEQEDAAXXXXXXXXXXXNKEHKKV--------DGNHVNTPFLLFG-RFTDK 104
D+ A+ N E K DG+ + FLLFG R+TDK
Sbjct: 1406 EDDVAAAS-LSLSLSFPSSNMEQTKASSKAELLPDGHRPSPSFLLFGRRYTDK 1457
>Medtr5g007180.3 | RING/FYVE/PHD zinc finger protein, putative | HC |
chr5:1231178-1237896 | 20130731
Length = 1457
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 55/113 (48%), Gaps = 14/113 (12%)
Query: 1 MPLKGLHADRFRDGIPNLELALGGETKXXXXXXXXXXXXKGMLPFLVGAVERKNNPADSL 60
M +KG+H + IPNL LALG ET+ KGMLPFLVG E+KNN AD
Sbjct: 1350 MAMKGIHERE--NVIPNLNLALGDETEMPPSPPPAGP--KGMLPFLVGPAEKKNNHADRP 1405
Query: 61 ADEQEDAAXXXXXXXXXXXNKEHKKV--------DGNHVNTPFLLFG-RFTDK 104
D+ A+ N E K DG+ + FLLFG R+TDK
Sbjct: 1406 EDDVAAAS-LSLSLSFPSSNMEQTKASSKAELLPDGHRPSPSFLLFGRRYTDK 1457