Miyakogusa Predicted Gene

Lj1g3v0116490.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0116490.1 Non Characterized Hit- tr|A5BHP5|A5BHP5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,73.91,0.000004,Bet v1-like,NULL; SUBFAMILY NOT NAMED,NULL;
PHOSPHATIDYLCHOLINE TRANSFER PROTEIN,NULL; START,Lipid-b,CUFF.25249.1
         (321 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g007030.1 | mammalian STARD2 lipid-binding START domain pr...   516   e-147
Medtr5g007030.2 | mammalian STARD2 lipid-binding START domain pr...   345   2e-95
Medtr1g078030.1 | mammalian STARD2 lipid-binding START domain pr...   275   6e-74
Medtr3g092640.1 | membrane-related protein CP5, putative | HC | ...   269   3e-72
Medtr4g005140.1 | homeobox/lipid-binding domain protein | HC | c...   105   7e-23

>Medtr5g007030.1 | mammalian STARD2 lipid-binding START domain
           protein | HC | chr5:1173758-1179345 | 20130731
          Length = 436

 Score =  516 bits (1330), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 255/321 (79%), Positives = 272/321 (84%), Gaps = 4/321 (1%)

Query: 1   MEDSFFDVVEFLKKPSIAETFVDILLCAVPIWLAVMIGLLIGWSWRPRWTGLVFLGFRSK 60
           MED  FDV+EF+KKPSI ETFVDILLCAVPIWLAVMIGL+IGWSWRPRWTGL+F+G RSK
Sbjct: 1   MEDYLFDVMEFMKKPSITETFVDILLCAVPIWLAVMIGLVIGWSWRPRWTGLLFIGLRSK 60

Query: 61  LRFLWTAPPGFGARRLWFAFTALSAFSICRTFWSNFKGKKNKXXXXXXXXXXXXXXXXXX 120
            RFLWT PPGFGARRLW AFTALSAFSICR +WSNFK K+                    
Sbjct: 61  FRFLWTVPPGFGARRLWLAFTALSAFSICRRYWSNFKNKEK----VLDPSSNSCSDDATD 116

Query: 121 XXKQTTRSGDKAEERGKDIVTQADLENLLHLLESKGGVMDWQCFMERSTPNMQYQAWRHD 180
             K   RSGDKA+ER KD V +ADLE+LLHLLE K G +DWQ FMERSTPNMQY+AWR+D
Sbjct: 117 ATKHAARSGDKADERDKDTVREADLEHLLHLLEGKDGEIDWQSFMERSTPNMQYKAWRYD 176

Query: 181 PETGPTVYRSRTVFEDATPELVRDFFWDDDFRPKWDAMLAYCKVLEECPQNGTMISHWIK 240
            ETG TVYRSRTVFEDATPELVRDFFWDDDFRPKWD MLA+CKVL+ECP NGT I HWIK
Sbjct: 177 SETGATVYRSRTVFEDATPELVRDFFWDDDFRPKWDPMLAHCKVLKECPHNGTSIVHWIK 236

Query: 241 KFPFFCSDREYIIARRIWQAGNTYYCVTKGVPYPSLPKRDKPRRVDQYFSSWVIKPVESR 300
           KFPFFCSDREYIIARRIWQAGN YYCVTKGVPYPSLPKRDKPRRVD YFSSWVIKPVESR
Sbjct: 237 KFPFFCSDREYIIARRIWQAGNAYYCVTKGVPYPSLPKRDKPRRVDLYFSSWVIKPVESR 296

Query: 301 KGDGQLTACEVTLLHYEDMGI 321
           KGDGQL+ACEVTLLH+EDMGI
Sbjct: 297 KGDGQLSACEVTLLHHEDMGI 317


>Medtr5g007030.2 | mammalian STARD2 lipid-binding START domain
           protein | HC | chr5:1173861-1179345 | 20130731
          Length = 326

 Score =  345 bits (886), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 169/194 (87%), Positives = 179/194 (92%)

Query: 128 SGDKAEERGKDIVTQADLENLLHLLESKGGVMDWQCFMERSTPNMQYQAWRHDPETGPTV 187
           SGDKA+ER KD V +ADLE+LLHLLE K G +DWQ FMERSTPNMQY+AWR+D ETG TV
Sbjct: 14  SGDKADERDKDTVREADLEHLLHLLEGKDGEIDWQSFMERSTPNMQYKAWRYDSETGATV 73

Query: 188 YRSRTVFEDATPELVRDFFWDDDFRPKWDAMLAYCKVLEECPQNGTMISHWIKKFPFFCS 247
           YRSRTVFEDATPELVRDFFWDDDFRPKWD MLA+CKVL+ECP NGT I HWIKKFPFFCS
Sbjct: 74  YRSRTVFEDATPELVRDFFWDDDFRPKWDPMLAHCKVLKECPHNGTSIVHWIKKFPFFCS 133

Query: 248 DREYIIARRIWQAGNTYYCVTKGVPYPSLPKRDKPRRVDQYFSSWVIKPVESRKGDGQLT 307
           DREYIIARRIWQAGN YYCVTKGVPYPSLPKRDKPRRVD YFSSWVIKPVESRKGDGQL+
Sbjct: 134 DREYIIARRIWQAGNAYYCVTKGVPYPSLPKRDKPRRVDLYFSSWVIKPVESRKGDGQLS 193

Query: 308 ACEVTLLHYEDMGI 321
           ACEVTLLH+EDMGI
Sbjct: 194 ACEVTLLHHEDMGI 207


>Medtr1g078030.1 | mammalian STARD2 lipid-binding START domain
           protein | HC | chr1:34888325-34884479 | 20130731
          Length = 395

 Score =  275 bits (702), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 140/305 (45%), Positives = 183/305 (60%), Gaps = 41/305 (13%)

Query: 17  IAETFVDILLCAVPIWLAVMIGLLIGWSWRPRWTGLVFLGFRSKLRFLWTAPPGFGARRL 76
           + +   +++    P+W+AV+ G+++GW+W+P+W                  P  +     
Sbjct: 9   VMDILGNLVTFIAPLWIAVIFGVVVGWAWKPKWA---------------IEPNNYSWSTN 53

Query: 77  WFAFTALSAFSICRTFWSNFKGKKNKXXXXXXXXXXXXXXXXXXXXKQTTRSGDKAEERG 136
            F F         R  W N+   +N+                       T S  ++E+  
Sbjct: 54  LFKF---------RIPWFNYSELQNQPGLEY----------------SATSSSGESEKGL 88

Query: 137 KDIVTQADLENLLHLLESKGGVMDWQCFMERSTPNMQYQAWRHDPETGPTVYRSRTVFED 196
           + IVT+ DL+NL  L+E K G   W   M+RSTPNM YQAWR D E GP  YRSRTVFED
Sbjct: 89  RSIVTEHDLQNLCKLVEEKDGGPAWIQMMDRSTPNMTYQAWRRDQENGPPQYRSRTVFED 148

Query: 197 ATPELVRDFFWDDDFRPKWDAMLAYCKVLEECPQNGTMISHWIKKFPFFCSDREYIIARR 256
           A+PELVRDFFWDD+FR +WD ML +   ++EC   GTM+  W++KFPFFCSDREYII RR
Sbjct: 149 ASPELVRDFFWDDEFRSRWDDMLIHASTIQECEVTGTMMVQWVRKFPFFCSDREYIIGRR 208

Query: 257 IWQAGNTYYCVTKGVPYPSLPKRDKPRRVDQYFSSWVIKPVESRKGDGQLTACEVTLLHY 316
           IW A  TYYCVTKGVP  S+P++ KPRRVD Y+SS+ I+ V+SRK DGQLT+CEV   HY
Sbjct: 209 IWDAERTYYCVTKGVPCSSIPRQSKPRRVDLYYSSFFIRAVKSRK-DGQLTSCEVLFFHY 267

Query: 317 EDMGI 321
           EDMGI
Sbjct: 268 EDMGI 272


>Medtr3g092640.1 | membrane-related protein CP5, putative | HC |
           chr3:42338841-42335197 | 20130731
          Length = 424

 Score =  269 bits (688), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 131/292 (44%), Positives = 174/292 (59%), Gaps = 8/292 (2%)

Query: 30  PIWLAVMIGLLIGWSWRPRWTGLVFLGFRSKLRFLWTAPPGFGARRLWFAFTALSAFSIC 89
           P+ L   +G+++GW W+P+W   +   F   L    +  P F   + +      S+ S C
Sbjct: 17  PMLLVFFLGIIVGWLWKPKWISSLAKSF--DLASPISDSPIFSPLKFY------SSLSPC 68

Query: 90  RTFWSNFKGKKNKXXXXXXXXXXXXXXXXXXXXKQTTRSGDKAEERGKDIVTQADLENLL 149
                  +                           ++ S +K+ E   + VT  DL +L 
Sbjct: 69  VNSSITMQTPNPDSLCINKEINKKGSSSSSPTNFDSSTSSNKSGEDTSNGVTIDDLHHLY 128

Query: 150 HLLESKGGVMDWQCFMERSTPNMQYQAWRHDPETGPTVYRSRTVFEDATPELVRDFFWDD 209
            L+E K G + W   M++STP M YQAWR +P+ GP  YRS T+FEDATPE+VRD FWDD
Sbjct: 129 KLVEEKDGGLPWIQMMDKSTPTMSYQAWRREPKDGPPQYRSSTIFEDATPEMVRDLFWDD 188

Query: 210 DFRPKWDAMLAYCKVLEECPQNGTMISHWIKKFPFFCSDREYIIARRIWQAGNTYYCVTK 269
            FRPKWD ML     LEECP  GTM   WI+KFPFFC DREYII RRIW+ G +YYC+TK
Sbjct: 189 QFRPKWDDMLVNSTTLEECPTTGTMKVQWIRKFPFFCKDREYIIGRRIWECGRSYYCITK 248

Query: 270 GVPYPSLPKRDKPRRVDQYFSSWVIKPVESRKGDGQLTACEVTLLHYEDMGI 321
           GV  PS+P+++KPRRVD Y+SSW I+ VES++ +GQLTACE+ L H+E+MGI
Sbjct: 249 GVDCPSIPRQEKPRRVDVYYSSWCIRAVESKRDNGQLTACEILLFHHEEMGI 300


>Medtr4g005140.1 | homeobox/lipid-binding domain protein | HC |
           chr4:85012-80984 | 20130731
          Length = 381

 Score =  105 bits (262), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 100/189 (52%), Gaps = 9/189 (4%)

Query: 135 RGKDIVTQADLENLLHLLESK-GGVMDWQCFMERSTPNMQYQAWRHDPETGPTVYRSRTV 193
           R   IVT  DL+ L+ + +        W+  +++   ++ Y A    P+ GP  Y S TV
Sbjct: 67  RTSKIVTNEDLKFLMMIFDGNLNENAKWEDVIDKRNDHLCYNAKSCKPKNGPLRYLSVTV 126

Query: 194 FEDATPELVRDFFWDDDFRPKWDAMLAYCKVLEECPQNGTMISHWIKKFPFFCSDREYII 253
           F + + E++R+F+ D+D+R +WD  +     L+    +G+ +   +KKFP     REY++
Sbjct: 127 FNNISAEMLRNFYMDNDYRKQWDKTVVEHNQLQVDKSDGSEVGRTVKKFPLL-KPREYVL 185

Query: 254 ARRIWQAGN-TYYCVTKGVPYPSLPKRDKPRRVDQYFSSWVIKPVESRKGDGQLTACEVT 312
             ++W+  + T+YC  K   +   P+++K  RV+ + S W I+ V  R       ACE+T
Sbjct: 186 TWKLWEGRDKTFYCYIKECEHTLAPRQNKYVRVEFFRSGWRIRQVPGR------NACEIT 239

Query: 313 LLHYEDMGI 321
           + H ED G+
Sbjct: 240 MFHQEDAGL 248