Miyakogusa Predicted Gene

Lj1g3v0116440.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0116440.2 Non Characterized Hit- tr|I1L858|I1L858_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,53.68,3e-19,seg,NULL;
Plant lipid transfer protein / seed storage,Bifunctional
inhibitor/plant lipid transfer pr,CUFF.25256.2
         (208 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g006940.1 | Lipid transfer protein | HC | chr5:1143135-114...   167   6e-42
Medtr1g103420.1 | Lipid transfer protein | HC | chr1:46817645-46...   154   4e-38
Medtr1g071720.1 | Lipid transfer protein | HC | chr1:31856691-31...    89   3e-18
Medtr1g071720.2 | Lipid transfer protein | HC | chr1:31856691-31...    89   4e-18
Medtr7g095250.1 | Lipid transfer protein | HC | chr7:38117812-38...    81   7e-16
Medtr5g006950.1 | Lipid transfer protein | HC | chr5:1146399-114...    54   1e-07
Medtr1g103450.1 | Lipid transfer protein | HC | chr1:46824422-46...    53   2e-07
Medtr7g095230.1 | Lipid transfer protein | HC | chr7:38109826-38...    51   7e-07
Medtr1g103490.1 | Lipid transfer protein | HC | chr1:46837798-46...    49   4e-06
Medtr2g008560.1 | Lipid transfer protein | HC | chr2:1536456-153...    48   8e-06

>Medtr5g006940.1 | Lipid transfer protein | HC |
           chr5:1143135-1141543 | 20130731
          Length = 212

 Score =  167 bits (423), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 77/104 (74%), Positives = 93/104 (89%)

Query: 7   LALVLAMAIFMAAPGYAQINTPCNVSAISTSFTPCMSFLTNSSGNGTSPTAECCDSIKSL 66
           L +VLA+   MAAP YAQI TPCN+S IS++ +PC+SFLTNSSGNGTSPTA+CC++IK+L
Sbjct: 10  LTVVLAVVTAMAAPAYAQITTPCNMSMISSTISPCLSFLTNSSGNGTSPTADCCNAIKTL 69

Query: 67  TSGGRDCLCLVVTGNVPFSIPINRTLAISLPRACKLPGVPLQCK 110
           TSG +DC+CL+ TGNVPF++PINRTLAISLPRAC LPGVPLQCK
Sbjct: 70  TSGSKDCMCLIATGNVPFALPINRTLAISLPRACNLPGVPLQCK 113


>Medtr1g103420.1 | Lipid transfer protein | HC |
           chr1:46817645-46816110 | 20130731
          Length = 217

 Score =  154 bits (390), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 75/104 (72%), Positives = 85/104 (81%)

Query: 7   LALVLAMAIFMAAPGYAQINTPCNVSAISTSFTPCMSFLTNSSGNGTSPTAECCDSIKSL 66
           LA++L + I MA P  AQINTPCN S IST FTPCM FLT SS NGTSPT ECC ++KSL
Sbjct: 10  LAIILVINIVMAGPANAQINTPCNPSTISTLFTPCMGFLTGSSANGTSPTTECCGALKSL 69

Query: 67  TSGGRDCLCLVVTGNVPFSIPINRTLAISLPRACKLPGVPLQCK 110
           TS G +CLCL+VT +VPF IPINRTLAISLPRAC +PGVP+QCK
Sbjct: 70  TSSGMNCLCLLVTASVPFKIPINRTLAISLPRACNMPGVPVQCK 113


>Medtr1g071720.1 | Lipid transfer protein | HC |
           chr1:31856691-31855319 | 20130731
          Length = 190

 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/92 (51%), Positives = 65/92 (70%), Gaps = 4/92 (4%)

Query: 22  YAQINTPCNVSAISTSFTPCMSFLTNSSG-NG-TSPTAECCDSIKSLTSGGRDCLCLVVT 79
           + QI+TPC  S IS SFTPC +F+T S+  NG  +P++ CCDS++S+ S   DC CL++T
Sbjct: 25  FGQISTPCTTSMIS-SFTPCANFITGSTNYNGLITPSSSCCDSLQSMMSTSMDCACLLIT 83

Query: 80  GNVPFSI-PINRTLAISLPRACKLPGVPLQCK 110
            NVPF + PINR L+  LP++C L G+  QCK
Sbjct: 84  ANVPFQLPPINRVLSFFLPQSCNLNGLHAQCK 115


>Medtr1g071720.2 | Lipid transfer protein | HC |
           chr1:31856691-31855319 | 20130731
          Length = 189

 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/92 (51%), Positives = 65/92 (70%), Gaps = 4/92 (4%)

Query: 22  YAQINTPCNVSAISTSFTPCMSFLTNSSG-NG-TSPTAECCDSIKSLTSGGRDCLCLVVT 79
           + QI+TPC  S IS SFTPC +F+T S+  NG  +P++ CCDS++S+ S   DC CL++T
Sbjct: 25  FGQISTPCTTSMIS-SFTPCANFITGSTNYNGLITPSSSCCDSLQSMMSTSMDCACLLIT 83

Query: 80  GNVPFSI-PINRTLAISLPRACKLPGVPLQCK 110
            NVPF + PINR L+  LP++C L G+  QCK
Sbjct: 84  ANVPFQLPPINRVLSFFLPQSCNLNGLHAQCK 115


>Medtr7g095250.1 | Lipid transfer protein | HC |
           chr7:38117812-38119644 | 20130731
          Length = 180

 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 1/78 (1%)

Query: 34  ISTSFTPCMSFLTNSSGNGTSPTAECCDSIKSLTSGGRDCLCLVVTGNVP-FSIPINRTL 92
           IS++FTPC + +T S+ NG  P+  CCDS++SL S   DC CL+++ N   F +PIN+ L
Sbjct: 2   ISSTFTPCANIITGSTNNGLVPSTTCCDSLRSLMSTNMDCACLMMSSNAQIFQLPINQVL 61

Query: 93  AISLPRACKLPGVPLQCK 110
           AISL +AC + G  +QCK
Sbjct: 62  AISLSQACNINGASVQCK 79


>Medtr5g006950.1 | Lipid transfer protein | HC |
           chr5:1146399-1147714 | 20130731
          Length = 168

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 9/106 (8%)

Query: 7   LALVLAMAIFMAAPGYAQINTPCNVSAISTSFTPCMSFLTNSSGNGTSPTAECCDSIKSL 66
           + LVL +   M A   AQ     + + +  S +PC++++T   GN ++P++ CC ++ S+
Sbjct: 8   MNLVLVVIAMMCAGATAQ----SSCTNVLVSLSPCLNYIT---GNSSTPSSGCCSNLASV 60

Query: 67  TSGGRDCLCLVVTGNV-PFSIPINRTLAISLPRACKLPGVPL-QCK 110
            S    CLC V+ G      I IN+T A++LP ACK+   P  QCK
Sbjct: 61  VSSQPLCLCQVLGGGASSLGISINQTQALALPGACKVQTPPTSQCK 106


>Medtr1g103450.1 | Lipid transfer protein | HC |
           chr1:46824422-46825180 | 20130731
          Length = 154

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 4/89 (4%)

Query: 23  AQINTPCNVSAISTSFTPCMSFLTNSSGNGTSPTAECCDSIKSLTSGGRDCLCLVVTGNV 82
           A +    N +    S  PC+ ++    GN  +PTA CC  + ++     +CLCL++  ++
Sbjct: 20  AGVTAQSNCTDALMSLMPCLGYV---RGNSPTPTAGCCTQLANVVKSQPECLCLIIGSDL 76

Query: 83  PFSIPINRTLAISLPRACKLPGVPL-QCK 110
             S+ IN+TLA++LP AC +   P+ QC+
Sbjct: 77  GSSLGINKTLALALPAACNVETPPVSQCE 105


>Medtr7g095230.1 | Lipid transfer protein | HC |
           chr7:38109826-38108564 | 20130731
          Length = 184

 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 7/105 (6%)

Query: 7   LALVLAMAIFMAA-PGYAQINTPCNVSAISTSFTPCMSFLTNSSGNGTSPTAECCDSIKS 65
           + ++L+M   M A  G     T  N + +  S +PC+ ++T   G  ++P++ CC  + S
Sbjct: 6   IEMLLSMLFVMVALRGVTVAQTDSNCANVLISLSPCLDYIT---GQTSTPSSGCCSQLAS 62

Query: 66  LTSGGRDCLCLVVTG---NVPFSIPINRTLAISLPRACKLPGVPL 107
           +      CLC VV G   ++  S+ IN+T A++LP AC +   P+
Sbjct: 63  VVGSQPQCLCEVVDGGASSIAASLNINQTRALALPMACNIQTPPI 107


>Medtr1g103490.1 | Lipid transfer protein | HC |
           chr1:46837798-46839766 | 20130731
          Length = 156

 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 9/105 (8%)

Query: 8   ALVLAMAIFMAAPGYAQINTPCNVSAISTSFTPCMSFLTNSSGNGTSPTAECCDSIKSLT 67
            LVL +   + A   AQ     + + +  + +PC+ ++T   G  ++PT+ CC  + S+ 
Sbjct: 9   GLVLVILAMLCADAMAQ----SSCTNVLVNLSPCLDYIT---GKSSTPTSGCCTQLASVV 61

Query: 68  SGGRDCLCLVVT-GNVPFSIPINRTLAISLPRACKLPGVPL-QCK 110
                CLC V+  G     I +N+T A++LP AC +   P  QCK
Sbjct: 62  KSQPQCLCQVLDGGGSSLGIKVNQTQALALPSACNVQTPPTSQCK 106


>Medtr2g008560.1 | Lipid transfer protein | HC |
           chr2:1536456-1535394 | 20130731
          Length = 172

 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 37  SFTPCMSFLTNSSGNGTSPTAECCDSIKSLTSGGRDCLCLVVTGNVPFSIPINRTLAISL 96
           + T C SFLTN S   T P   CC+ +K++ +    CLC    GN    + +N + A++L
Sbjct: 38  AMTDCFSFLTNGS-TLTQPEGSCCNGLKTIVNTAPSCLCGAFKGNAHLGVVLNVSKALTL 96

Query: 97  PRACKL 102
           P ACK+
Sbjct: 97  PFACKV 102