Miyakogusa Predicted Gene

Lj1g3v0114190.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0114190.2 Non Characterized Hit- tr|I1KKG6|I1KKG6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23437
PE,69.97,0,SCO1-SenC,Copper chaperone SCO1/SenC;
Thioredoxin-like,Thioredoxin-like fold; SCO1/SENC,Copper
chape,CUFF.25230.2
         (324 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g069070.1 | electron transport SCO1/SenC family protein, p...   408   e-114
Medtr8g090295.1 | electron transport SCO1/SenC family protein, p...   172   5e-43
Medtr8g090295.2 | electron transport SCO1/SenC family protein, p...   101   9e-22

>Medtr7g069070.1 | electron transport SCO1/SenC family protein,
           putative | HC | chr7:25419911-25424053 | 20130731
          Length = 329

 Score =  408 bits (1049), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 206/288 (71%), Positives = 226/288 (78%), Gaps = 6/288 (2%)

Query: 42  SSQPMPMVGNQGFGNGVLLTCQRFLSS-----KAAPSTTNQEKPASDNXXXXXXXXXXXX 96
           S QP   V  Q +GNG L+  QRFLSS     K+ P        ++ +            
Sbjct: 43  SHQPR-QVEKQVYGNGSLMLHQRFLSSTDNHDKSPPPPNKPPSDSNSSNSDSDSGQGKES 101

Query: 97  XXXXXXXTDAGKAVRGSPVSWLSFVLLVLTGAGLVFYYDREKKRHIEDIHSASEAVKHGP 156
                  +D  K++RGSPV+WLSFV L+LTG GLV+YYD+EKKRHIEDI + SEAVK GP
Sbjct: 102 GGEQKQNSDYQKSLRGSPVAWLSFVFLILTGGGLVYYYDKEKKRHIEDIQNVSEAVKQGP 161

Query: 157 SAGKAAIGGPFHLTNHHGKRVTEKDFLGKWTVMYFGFTHCPDICPDELQKLADAVDKIKE 216
           SAGKAAIGGPF LTNHHGKRVT+KDF+GKWT+MYFGFTHCPDICP+ELQKL  AVDKIKE
Sbjct: 162 SAGKAAIGGPFELTNHHGKRVTDKDFMGKWTLMYFGFTHCPDICPEELQKLVAAVDKIKE 221

Query: 217 KSGIEIVPVFISVDPERDTVEQVGEYVKEFHPKLIGLTGSSDEIKSVARAYRVYYMKTAE 276
           KSGIE VPVFISVDPERDTVEQV EYVKEFHPKLIGLTGS DEIKSVARAYRVYYMKTAE
Sbjct: 222 KSGIETVPVFISVDPERDTVEQVAEYVKEFHPKLIGLTGSPDEIKSVARAYRVYYMKTAE 281

Query: 277 EDSDYLVDHSIVMYLMGPDMNFVKFFGKNNDADSLADGIIKEIKQYKK 324
           EDSDYLVDHSIV+YLM PDM FVKFFGKNND DSLADG+IKEIK Y K
Sbjct: 282 EDSDYLVDHSIVIYLMAPDMGFVKFFGKNNDVDSLADGVIKEIKPYIK 329


>Medtr8g090295.1 | electron transport SCO1/SenC family protein,
           putative | HC | chr8:37944701-37948024 | 20130731
          Length = 271

 Score =  172 bits (435), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 128/203 (63%), Gaps = 7/203 (3%)

Query: 121 VLLVLTGAGLVFYYDREKKR--HIEDIHSASEAVKHGPSAGKAAIGGPFHLTNHHGKRVT 178
           VLL   G    F+Y+ E++     +   S +  +  GP      IGGPF L N   + VT
Sbjct: 71  VLLGFAGIAAFFHYNDERRAVPKGDQGDSRNRNIVCGP-----IIGGPFTLVNKEKQTVT 125

Query: 179 EKDFLGKWTVMYFGFTHCPDICPDELQKLADAVDKIKEKSGIEIVPVFISVDPERDTVEQ 238
           E++FLG W ++YFG+T  PDI P+++Q +A A D ++ K  ++I+PVF+++DP+RDT  Q
Sbjct: 126 ERNFLGNWVLLYFGYTSSPDIGPEQVQLMAKATDILESKQNLKILPVFVTIDPQRDTPSQ 185

Query: 239 VGEYVKEFHPKLIGLTGSSDEIKSVARAYRVYYMKTAEEDSDYLVDHSIVMYLMGPDMNF 298
           +  Y++EF+ ++IGLTG    I+ +A+ YRVY+ K  E+  DYLVD S  MYL+ PDM  
Sbjct: 186 LRAYLEEFNSRIIGLTGPVAAIRQMAQQYRVYFKKVEEDGGDYLVDSSHNMYLLSPDMEV 245

Query: 299 VKFFGKNNDADSLADGIIKEIKQ 321
           V+ FG   +A+ L++ I KE+ +
Sbjct: 246 VRCFGVEYNAEQLSEAIWKELNK 268


>Medtr8g090295.2 | electron transport SCO1/SenC family protein,
           putative | HC | chr8:37944701-37947271 | 20130731
          Length = 192

 Score =  101 bits (252), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 77/126 (61%), Gaps = 7/126 (5%)

Query: 121 VLLVLTGAGLVFYYDREKKR--HIEDIHSASEAVKHGPSAGKAAIGGPFHLTNHHGKRVT 178
           VLL   G    F+Y+ E++     +   S +  +  GP      IGGPF L N   + VT
Sbjct: 71  VLLGFAGIAAFFHYNDERRAVPKGDQGDSRNRNIVCGP-----IIGGPFTLVNKEKQTVT 125

Query: 179 EKDFLGKWTVMYFGFTHCPDICPDELQKLADAVDKIKEKSGIEIVPVFISVDPERDTVEQ 238
           E++FLG W ++YFG+T  PDI P+++Q +A A D ++ K  ++I+PVF+++DP+RDT  Q
Sbjct: 126 ERNFLGNWVLLYFGYTSSPDIGPEQVQLMAKATDILESKQNLKILPVFVTIDPQRDTPSQ 185

Query: 239 VGEYVK 244
           +  Y++
Sbjct: 186 LRAYLE 191