Miyakogusa Predicted Gene

Lj1g3v0114190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0114190.1 Non Characterized Hit- tr|I1KKG6|I1KKG6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23437
PE,69.03,0,SCO1-SenC,Copper chaperone SCO1/SenC;
Thioredoxin-like,Thioredoxin-like fold; SCO1/SENC,Copper
chape,CUFF.25230.1
         (333 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g069070.1 | electron transport SCO1/SenC family protein, p...   408   e-114
Medtr8g090295.1 | electron transport SCO1/SenC family protein, p...   172   5e-43
Medtr8g090295.2 | electron transport SCO1/SenC family protein, p...   101   9e-22

>Medtr7g069070.1 | electron transport SCO1/SenC family protein,
           putative | HC | chr7:25419911-25424053 | 20130731
          Length = 329

 Score =  408 bits (1048), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/282 (71%), Positives = 224/282 (79%), Gaps = 5/282 (1%)

Query: 57  KVGNQGFGNGVLLTCQRFLSS-----KAAPSTTNQEKPASDNXXXXXXXXXXXXXXXXXX 111
           +V  Q +GNG L+  QRFLSS     K+ P        ++ +                  
Sbjct: 48  QVEKQVYGNGSLMLHQRFLSSTDNHDKSPPPPNKPPSDSNSSNSDSDSGQGKESGGEQKQ 107

Query: 112 XTDAGKAVRGSPVSWLSFVLLVLTGAGLVFYYDREKKRHIEDIHSASEAVKHGPSAGKAA 171
            +D  K++RGSPV+WLSFV L+LTG GLV+YYD+EKKRHIEDI + SEAVK GPSAGKAA
Sbjct: 108 NSDYQKSLRGSPVAWLSFVFLILTGGGLVYYYDKEKKRHIEDIQNVSEAVKQGPSAGKAA 167

Query: 172 IGGPFHLTNHHGKRVTEKDFLGKWTVMYFGFTHCPDICPDELQKLADAVDKIKEKSGIEI 231
           IGGPF LTNHHGKRVT+KDF+GKWT+MYFGFTHCPDICP+ELQKL  AVDKIKEKSGIE 
Sbjct: 168 IGGPFELTNHHGKRVTDKDFMGKWTLMYFGFTHCPDICPEELQKLVAAVDKIKEKSGIET 227

Query: 232 VPVFISVDPERDTVEQVGEYVKEFHPKLIGLTGSSDEIKSVARAYRVYYMKTAEEDSDYL 291
           VPVFISVDPERDTVEQV EYVKEFHPKLIGLTGS DEIKSVARAYRVYYMKTAEEDSDYL
Sbjct: 228 VPVFISVDPERDTVEQVAEYVKEFHPKLIGLTGSPDEIKSVARAYRVYYMKTAEEDSDYL 287

Query: 292 VDHSIVMYLMGPDMNFVKFFGKNNDADSLADGIIKEIKQYKK 333
           VDHSIV+YLM PDM FVKFFGKNND DSLADG+IKEIK Y K
Sbjct: 288 VDHSIVIYLMAPDMGFVKFFGKNNDVDSLADGVIKEIKPYIK 329


>Medtr8g090295.1 | electron transport SCO1/SenC family protein,
           putative | HC | chr8:37944701-37948024 | 20130731
          Length = 271

 Score =  172 bits (435), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 128/203 (63%), Gaps = 7/203 (3%)

Query: 130 VLLVLTGAGLVFYYDREKKR--HIEDIHSASEAVKHGPSAGKAAIGGPFHLTNHHGKRVT 187
           VLL   G    F+Y+ E++     +   S +  +  GP      IGGPF L N   + VT
Sbjct: 71  VLLGFAGIAAFFHYNDERRAVPKGDQGDSRNRNIVCGP-----IIGGPFTLVNKEKQTVT 125

Query: 188 EKDFLGKWTVMYFGFTHCPDICPDELQKLADAVDKIKEKSGIEIVPVFISVDPERDTVEQ 247
           E++FLG W ++YFG+T  PDI P+++Q +A A D ++ K  ++I+PVF+++DP+RDT  Q
Sbjct: 126 ERNFLGNWVLLYFGYTSSPDIGPEQVQLMAKATDILESKQNLKILPVFVTIDPQRDTPSQ 185

Query: 248 VGEYVKEFHPKLIGLTGSSDEIKSVARAYRVYYMKTAEEDSDYLVDHSIVMYLMGPDMNF 307
           +  Y++EF+ ++IGLTG    I+ +A+ YRVY+ K  E+  DYLVD S  MYL+ PDM  
Sbjct: 186 LRAYLEEFNSRIIGLTGPVAAIRQMAQQYRVYFKKVEEDGGDYLVDSSHNMYLLSPDMEV 245

Query: 308 VKFFGKNNDADSLADGIIKEIKQ 330
           V+ FG   +A+ L++ I KE+ +
Sbjct: 246 VRCFGVEYNAEQLSEAIWKELNK 268


>Medtr8g090295.2 | electron transport SCO1/SenC family protein,
           putative | HC | chr8:37944701-37947271 | 20130731
          Length = 192

 Score =  101 bits (252), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 77/126 (61%), Gaps = 7/126 (5%)

Query: 130 VLLVLTGAGLVFYYDREKKR--HIEDIHSASEAVKHGPSAGKAAIGGPFHLTNHHGKRVT 187
           VLL   G    F+Y+ E++     +   S +  +  GP      IGGPF L N   + VT
Sbjct: 71  VLLGFAGIAAFFHYNDERRAVPKGDQGDSRNRNIVCGP-----IIGGPFTLVNKEKQTVT 125

Query: 188 EKDFLGKWTVMYFGFTHCPDICPDELQKLADAVDKIKEKSGIEIVPVFISVDPERDTVEQ 247
           E++FLG W ++YFG+T  PDI P+++Q +A A D ++ K  ++I+PVF+++DP+RDT  Q
Sbjct: 126 ERNFLGNWVLLYFGYTSSPDIGPEQVQLMAKATDILESKQNLKILPVFVTIDPQRDTPSQ 185

Query: 248 VGEYVK 253
           +  Y++
Sbjct: 186 LRAYLE 191