Miyakogusa Predicted Gene

Lj1g3v0112720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0112720.1 Non Characterized Hit- tr|I3SR18|I3SR18_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,96.55,0,RmlC-like
cupins,RmlC-like cupin domain; SUBFAMILY NOT NAMED,NULL; ACIREDUCTONE
DIOXYGENASE,Acireduc,CUFF.25216.1
         (117 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g102890.1 | 1,2-dihydroxy-3-keto-5-methylthiopentene dioxy...   218   1e-57
Medtr1g102870.1 | 1,2-dihydroxy-3-keto-5-methylthiopentene dioxy...   166   6e-42
Medtr1g102890.2 | 1,2-dihydroxy-3-keto-5-methylthiopentene dioxy...   146   3e-36
Medtr1g102870.2 | 1,2-dihydroxy-3-keto-5-methylthiopentene dioxy...   122   8e-29

>Medtr1g102890.1 | 1,2-dihydroxy-3-keto-5-methylthiopentene
           dioxygenase | HC | chr1:46505126-46503093 | 20130731
          Length = 187

 Score =  218 bits (554), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 103/116 (88%), Positives = 108/116 (93%)

Query: 2   PRESGNYEEKLKNFYTEHIHQDEEIRYCLEGSGYFDVRDKADRWIRIWIKAGDLIILPAG 61
           P +  NYEEKLKNFYTEHIH+DEEIRYCLEGSGYFDVRDK DRWIRIWIKAGDLIILPAG
Sbjct: 72  PEKVENYEEKLKNFYTEHIHEDEEIRYCLEGSGYFDVRDKNDRWIRIWIKAGDLIILPAG 131

Query: 62  IYHRFTLDTSNYVKLMRLFIGEPVWTAYNRPQEDNPARKEYMKGLIEKNRFPLAAH 117
           IYHRFTLDT+NYVKLMRLF+GEPVWTAYNRPQEDNPARKEY+KGL EK   PLAAH
Sbjct: 132 IYHRFTLDTNNYVKLMRLFMGEPVWTAYNRPQEDNPARKEYIKGLTEKTGVPLAAH 187


>Medtr1g102870.1 | 1,2-dihydroxy-3-keto-5-methylthiopentene
           dioxygenase | HC | chr1:46494649-46491467 | 20130731
          Length = 200

 Score =  166 bits (419), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 72/116 (62%), Positives = 93/116 (80%), Gaps = 3/116 (2%)

Query: 2   PRESGNYEEKLKNFYTEHIHQDEEIRYCLEGSGYFDVRDKADRWIRIWIKAGDLIILPAG 61
           P +  NYEEK+KNF+ EH+H DEEIRYC+ GSGYFDVRD+ + WIR+W+K G +IILPAG
Sbjct: 82  PEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEAWIRVWVKKGGMIILPAG 141

Query: 62  IYHRFTLDTSNYVKLMRLFIGEPVWTAYNRPQEDNPARKEYMKGLIEKNRFPLAAH 117
           IYHRFTLD SNY+K +R F+GEP+WT YNRP +  PAR +Y+K  +EK+   +A+H
Sbjct: 142 IYHRFTLDESNYIKALRFFVGEPIWTPYNRPHDHLPARGQYIKTFVEKD---VASH 194


>Medtr1g102890.2 | 1,2-dihydroxy-3-keto-5-methylthiopentene
           dioxygenase | HC | chr1:46505126-46503093 | 20130731
          Length = 163

 Score =  146 bits (369), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 69/80 (86%), Positives = 74/80 (92%)

Query: 2   PRESGNYEEKLKNFYTEHIHQDEEIRYCLEGSGYFDVRDKADRWIRIWIKAGDLIILPAG 61
           P +  NYEEKLKNFYTEHIH+DEEIRYCLEGSGYFDVRDK DRWIRIWIKAGDLIILPAG
Sbjct: 72  PEKVENYEEKLKNFYTEHIHEDEEIRYCLEGSGYFDVRDKNDRWIRIWIKAGDLIILPAG 131

Query: 62  IYHRFTLDTSNYVKLMRLFI 81
           IYHRFTLDT+NYVK++ L I
Sbjct: 132 IYHRFTLDTNNYVKVINLSI 151


>Medtr1g102870.2 | 1,2-dihydroxy-3-keto-5-methylthiopentene
           dioxygenase | HC | chr1:46494636-46492208 | 20130731
          Length = 159

 Score =  122 bits (306), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 52/75 (69%), Positives = 64/75 (85%)

Query: 2   PRESGNYEEKLKNFYTEHIHQDEEIRYCLEGSGYFDVRDKADRWIRIWIKAGDLIILPAG 61
           P +  NYEEK+KNF+ EH+H DEEIRYC+ GSGYFDVRD+ + WIR+W+K G +IILPAG
Sbjct: 82  PEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEAWIRVWVKKGGMIILPAG 141

Query: 62  IYHRFTLDTSNYVKL 76
           IYHRFTLD SNY+K+
Sbjct: 142 IYHRFTLDESNYIKV 156