Miyakogusa Predicted Gene

Lj1g3v0112600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0112600.1 Non Characterized Hit- tr|D7MBC7|D7MBC7_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,29.11,3e-17,seg,NULL,CUFF.25213.1
         (437 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g006530.1 | tesmin/TSO1-like CXC domain protein | HC | chr...   242   5e-64
Medtr5g006530.2 | tesmin/TSO1-like CXC domain protein | HC | chr...   110   2e-24
Medtr1g103230.1 | tesmin/TSO1-like CXC domain protein | LC | chr...    69   1e-11
Medtr1g103180.1 | tesmin/TSO1-like CXC domain protein | LC | chr...    54   2e-07

>Medtr5g006530.1 | tesmin/TSO1-like CXC domain protein | HC |
           chr5:960319-955306 | 20130731
          Length = 778

 Score =  242 bits (617), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 179/473 (37%), Positives = 245/473 (51%), Gaps = 47/473 (9%)

Query: 5   TPERN--NTPLST-EGSPVFNFINSLSPLKPVKPAYAXXXXXXXXXXXXXXXXXXXHASC 61
           TPERN  NT LS  E SPVFN+IN+LSP+KPVK A+                    H + 
Sbjct: 9   TPERNQINTTLSKFEDSPVFNYINNLSPIKPVKSAHITQTFNSLSFSSPPSVFASPHVTS 68

Query: 62  HKESRFLRRHNLLDTSTPKVLSEDVNKIYSCEEAPKHSTHACHDSNEQQENTDQRISVGD 121
            KESRFLRRHN  + S  K   EDVNK+YS + A +  T + H+S E  E+ +Q ISVGD
Sbjct: 69  LKESRFLRRHNQPEESKAKDSYEDVNKLYSNDGAIEEPTLSRHNSRELDESAEQLISVGD 128

Query: 122 SSIEPSSEYTRFSSELPGALKYNSGGHGYSPLLCDNMANTCFELPGKPATYAACVQEGPK 181
            SIE S+E T+F+ ELP +L+YN G  GY P LC +  NT  EL G+  +  A  Q G  
Sbjct: 129 VSIELSNEETKFTDELPQSLQYNCGSPGYDPTLCGDEDNTLLELSGEAVSDDAYPQGGCV 188

Query: 182 KDSAVGNMHLQRVCHIGGR--------ENLITDASNRLILGSPNVTEAFRGLMNQQLDPS 233
            DS    +H Q    I  +        + LI +++N LI       EAF+G+M +     
Sbjct: 189 TDSVEAELHFQGTSQIDRKGESSDCDWDGLIPNSANMLIEA-----EAFKGMMQKSSGSP 243

Query: 234 IDLSNYFTYKY-------GRMQPVNLAASGSEHGIQYHPNGPI----TGQTQNNLPSVAL 282
           I LS++             ++  V+  AS S+H I+ H +  +    T  TQ+NL + + 
Sbjct: 244 IRLSDFVPLLQQCTRNDDQKIYMVDSVASSSQHEIENHCSELVAATDTDHTQDNLANGSS 303

Query: 283 MTSNPSEKMNDELLQATYRGM-RRSLDYEMASVQRKNXXXXXXXXXXTAKSDERGI--EN 339
           MT N +EKM++EL+  T+RG+ RR LD+EMASV+RK           T +S+      EN
Sbjct: 304 MTGNSNEKMDNELVSVTHRGIRRRCLDFEMASVRRKIADDNSNTNSSTQQSETMNAANEN 363

Query: 340 PLLPTKHTCDS----------HLNPLATLKDYKSSKGEPMSSQMQPNXXXXXXXXXXXXR 389
            LLP K   +S          HLN LA++KD+K  + E ++S  Q +            +
Sbjct: 364 QLLPAKRNANSQRCILPGIGLHLNALASVKDHKGKEIENLTSGRQLSLTSSTSLLLSACQ 423

Query: 390 Q-------EGPQSMENDLEPSEGEVQPAEDYTQSPGYMADEDFHPNVPKKKRK 435
           +           S E +L PS+  VQP ED  Q   YMA EDF+ N PKKKR+
Sbjct: 424 EHQHLSVVSVSISSERELVPSDNGVQPTEDCPQPIAYMATEDFNQNSPKKKRR 476


>Medtr5g006530.2 | tesmin/TSO1-like CXC domain protein | HC |
           chr5:959632-955396 | 20130731
          Length = 554

 Score =  110 bits (276), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 124/247 (50%), Gaps = 31/247 (12%)

Query: 220 EAFRGLMNQQLDPSIDLSNYFTYKYG-------RMQPVNLAASGSEHGIQYHPNGPI--- 269
           EAF+G+M +     I LS++             ++  V+  AS S+H I+ H +  +   
Sbjct: 6   EAFKGMMQKSSGSPIRLSDFVPLLQQCTRNDDQKIYMVDSVASSSQHEIENHCSELVAAT 65

Query: 270 -TGQTQNNLPSVALMTSNPSEKMNDELLQATYRGMRR-SLDYEMASVQRKNXXXXXXXXX 327
            T  TQ+NL + + MT N +EKM++EL+  T+RG+RR  LD+EMASV+RK          
Sbjct: 66  DTDHTQDNLANGSSMTGNSNEKMDNELVSVTHRGIRRRCLDFEMASVRRKIADDNSNTNS 125

Query: 328 XTAKSDERGI--ENPLLPTKHTCDS----------HLNPLATLKDYKSSKGEPMSSQMQP 375
            T +S+      EN LLP K   +S          HLN LA++KD+K  + E ++S  Q 
Sbjct: 126 STQQSETMNAANENQLLPAKRNANSQRCILPGIGLHLNALASVKDHKGKEIENLTSGRQL 185

Query: 376 NXXXXXXXXXXXXRQ-------EGPQSMENDLEPSEGEVQPAEDYTQSPGYMADEDFHPN 428
           +            ++           S E +L PS+  VQP ED  Q   YMA EDF+ N
Sbjct: 186 SLTSSTSLLLSACQEHQHLSVVSVSISSERELVPSDNGVQPTEDCPQPIAYMATEDFNQN 245

Query: 429 VPKKKRK 435
            PKKKR+
Sbjct: 246 SPKKKRR 252


>Medtr1g103230.1 | tesmin/TSO1-like CXC domain protein | LC |
           chr1:46705795-46702340 | 20130731
          Length = 624

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 174/451 (38%), Gaps = 112/451 (24%)

Query: 7   ERNNTPLST--EGSPVFNFINSLSPLKPVKPAYAXXXXXXXXXXXXXXXXXXXHASCHKE 64
           ++NNT +S   E    F+++++LSPL   K                         + + +
Sbjct: 5   DQNNTIVSNSLEDDSFFDYLDTLSPLNTKKYVGVGATETLNSLGMDNPLFTSLDVTFNND 64

Query: 65  SRFLRRHNLLDTSTPKVLSEDVNKIYSCEEAPKHSTHACHDSNEQQENTDQRISVGDSSI 124
           S FL R+NLL TS P+V         S EEAP  STHA  D+++     D  IS  D+  
Sbjct: 65  SIFLTRNNLLYTSNPEV---------SPEEAPTDSTHAWIDTSQLH---DPEISSDDA-- 110

Query: 125 EPSSEYTRFSSELPGALKYNSGGHGYSPLLCDNMANTCFELPGKPATYAACVQEGPKKDS 184
                            KY                    EL GK       VQ+    D+
Sbjct: 111 -----------------KY------------------LLELLGKQEPDGTDVQDESITDA 135

Query: 185 AVGNMHLQRVCHIGGRENLITDASNRLILGSPNVTEAFRGLMNQQLDPSIDLSNYFTYKY 244
             G  +         R+    D +N LI  + +VT   +   N         SNY     
Sbjct: 136 VEGGTY--------NRDGPDCDYNN-LISTTQSVTLLPQCTSN---------SNY----- 172

Query: 245 GRMQPVNLAASGSEHGIQYHPNGPIT-----GQTQNNLPSVALMTSNPSEKMNDELLQAT 299
            +M+ V+    GS++ I+ +P+ PI       Q Q+NL +VALM  N  ++ + EL +  
Sbjct: 173 -KMKTVDPLVFGSKYEIEDNPSEPIAVATDRNQAQDNLANVALMDRNQIKRGDGELAR-I 230

Query: 300 YRGMRRSL---DYEMASVQRKNXXXXXXXXXXTAKSDERGIENPLLPTKHTC-----DSH 351
            R ++RS    + EM S+QR N             SDER   N        C       +
Sbjct: 231 RRCIQRSCQGYESEMTSMQRNN-------------SDERNAINKNPSDSQKCVLQGNGFY 277

Query: 352 LNPLATLKDYKSSKGEPMSSQMQPNXXXXXXXXXXXXRQ-----EGPQSMENDLEPSEGE 406
           LN L  L  Y+  + E M SQ +P             RQ     + P  ME  L  SE E
Sbjct: 278 LNALPALNHYEGIENEKMPSQRKPESPSCTYSLNISVRQGHQLSQVPAPMETHLRLSENE 337

Query: 407 VQPAEDYTQSPGYMADEDFHPNVPKKKRKVQ 437
                D T+S  ++  EDF  + PK+  +VQ
Sbjct: 338 -----DVTKSSVHIPGEDFCQSTPKRTSEVQ 363


>Medtr1g103180.1 | tesmin/TSO1-like CXC domain protein | LC |
           chr1:46682000-46677103 | 20130731
          Length = 366

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 1/90 (1%)

Query: 348 CDSHLNPLATLKDYKSSKGEPMSSQMQPNXXXXXXXXXXXXRQ-EGPQSMENDLEPSEGE 406
           CD++L    + +   S + E +SS+ +P             R  + P SME  L PSE E
Sbjct: 277 CDNNLCTTKSDERNASIENETVSSERKPELPRCTSYGSQGHRLPQVPASMEIHLRPSEIE 336

Query: 407 VQPAEDYTQSPGYMADEDFHPNVPKKKRKV 436
           V  AED TQSP ++A EDF  + PK+KRKV
Sbjct: 337 VDAAEDITQSPVHIAGEDFCQSTPKRKRKV 366