Miyakogusa Predicted Gene

Lj1g3v0102560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0102560.1 Non Characterized Hit- tr|I1NGH9|I1NGH9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.398
PE=4,78.57,0.000000000000003,Homocysteine
S-methyltransferase,Homocysteine S-methyltransferase;
S-methyl_trans,Homocysteine S-met,gene.g28835.t1.1
         (263 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g103290.1 | homocysteine S-methyltransferase-like protein ...   357   7e-99
Medtr7g095280.1 | homocysteine S-methyltransferase-like protein ...   284   6e-77
Medtr1g103290.2 | homocysteine S-methyltransferase-like protein ...   267   9e-72
Medtr5g056640.1 | homocysteine S-methyltransferase-like protein ...   235   2e-62

>Medtr1g103290.1 | homocysteine S-methyltransferase-like protein |
           HC | chr1:46744608-46748707 | 20130731
          Length = 331

 Score =  357 bits (915), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 175/215 (81%), Positives = 191/215 (88%)

Query: 1   MRDFLDKCGGYAVIDGGFATELERHGADLHDPLWSAKCLISSPHLVRRVHLDYLDAGANI 60
           M+DFL+KCGGY +IDGGFATELERHG DL+DPLWSAKCL +SPHLVRRVHLDYLD+GANI
Sbjct: 2   MKDFLNKCGGYGIIDGGFATELERHGIDLNDPLWSAKCLFTSPHLVRRVHLDYLDSGANI 61

Query: 61  ILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCTKDSSDFIRDERYRR 120
           ILT+SYQAT+QGFEAKGFS+EEG+ LLRRSVELA EAR+IY  RCTKDS DFIRDERYR 
Sbjct: 62  ILTSSYQATIQGFEAKGFSKEEGQALLRRSVELAREARDIYYDRCTKDSFDFIRDERYRS 121

Query: 121 RPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIAFETIP 180
           RPIL+AASVGSYGAYLADG+EYTGDYGDA+TV TLKDFHRERVKILVDAGADLIAFETIP
Sbjct: 122 RPILIAASVGSYGAYLADGSEYTGDYGDAITVHTLKDFHRERVKILVDAGADLIAFETIP 181

Query: 181 NKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 215
           NK+            GIEIPAW SFSCKDE+NV S
Sbjct: 182 NKLDAQAYAELLEEEGIEIPAWFSFSCKDENNVAS 216



 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/60 (68%), Positives = 49/60 (81%)

Query: 204 SFSCKDESNVKSSGVAERDFVPYIDKWCDAGASLFGGCCRTTPNTIRGIAEAIYGKPQGK 263
           +++ ++ + VKSSG AE DFVPYI KW  AGA+LFGGCCRTTP TIRGI EA+YGKP GK
Sbjct: 270 TYNAENNTWVKSSGEAEEDFVPYIGKWRYAGATLFGGCCRTTPKTIRGITEALYGKPHGK 329


>Medtr7g095280.1 | homocysteine S-methyltransferase-like protein |
           HC | chr7:38139328-38133194 | 20130731
          Length = 340

 Score =  284 bits (726), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 139/218 (63%), Positives = 170/218 (77%), Gaps = 3/218 (1%)

Query: 1   MRDFLDKCGGYAVIDGGFATELERHGADLHDPLWSAKCLISSP--HLVRRVHLDYLDAGA 58
           + DFL + GG A+IDGG ATELERHGADL+DPLWSAKCLIS P  HL+R+VHLDYL+ GA
Sbjct: 6   ISDFLHRAGGTAIIDGGLATELERHGADLNDPLWSAKCLISIPQSHLIRQVHLDYLENGA 65

Query: 59  NIILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCTKDSSDFIRDER- 117
           +II TASYQAT+QGF+ KGFS EE E +LRRSVE+A EAR++Y  RC   SS    D+R 
Sbjct: 66  DIITTASYQATIQGFKEKGFSNEESENMLRRSVEIACEARDLYYERCAACSSGKNADDRI 125

Query: 118 YRRRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIAFE 177
            ++RPIL+AASVGSYGAYLADG+EY+G+YGDA+T++TLKDFHR RV++L DA ADL+AFE
Sbjct: 126 LKQRPILIAASVGSYGAYLADGSEYSGNYGDAITLKTLKDFHRRRVQVLADASADLLAFE 185

Query: 178 TIPNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 215
           TIPNK+             I++PAW  F+ KD  NV S
Sbjct: 186 TIPNKIEAQAFAELLEEENIKVPAWFCFNSKDGINVVS 223



 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 35/47 (74%)

Query: 213 VKSSGVAERDFVPYIDKWCDAGASLFGGCCRTTPNTIRGIAEAIYGK 259
           ++++GV ++DFV Y+ KWC+ GA L GGCCRTTP T+RGI   +Y  
Sbjct: 286 MQNTGVTDKDFVSYVSKWCELGACLVGGCCRTTPVTVRGIYNTLYSN 332


>Medtr1g103290.2 | homocysteine S-methyltransferase-like protein |
           HC | chr1:46746234-46748707 | 20130731
          Length = 307

 Score =  267 bits (682), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 135/169 (79%), Positives = 147/169 (86%)

Query: 47  RRVHLDYLDAGANIILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCT 106
           + VHLDYLD+GANIILT+SYQAT+QGFEAKGFS+EEG+ LLRRSVELA EAR+IY  RCT
Sbjct: 24  KLVHLDYLDSGANIILTSSYQATIQGFEAKGFSKEEGQALLRRSVELAREARDIYYDRCT 83

Query: 107 KDSSDFIRDERYRRRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKIL 166
           KDS DFIRDERYR RPIL+AASVGSYGAYLADG+EYTGDYGDA+TV TLKDFHRERVKIL
Sbjct: 84  KDSFDFIRDERYRSRPILIAASVGSYGAYLADGSEYTGDYGDAITVHTLKDFHRERVKIL 143

Query: 167 VDAGADLIAFETIPNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 215
           VDAGADLIAFETIPNK+            GIEIPAW SFSCKDE+NV S
Sbjct: 144 VDAGADLIAFETIPNKLDAQAYAELLEEEGIEIPAWFSFSCKDENNVAS 192



 Score = 91.3 bits (225), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/60 (68%), Positives = 49/60 (81%)

Query: 204 SFSCKDESNVKSSGVAERDFVPYIDKWCDAGASLFGGCCRTTPNTIRGIAEAIYGKPQGK 263
           +++ ++ + VKSSG AE DFVPYI KW  AGA+LFGGCCRTTP TIRGI EA+YGKP GK
Sbjct: 246 TYNAENNTWVKSSGEAEEDFVPYIGKWRYAGATLFGGCCRTTPKTIRGITEALYGKPHGK 305


>Medtr5g056640.1 | homocysteine S-methyltransferase-like protein |
           HC | chr5:23320750-23325183 | 20130731
          Length = 326

 Score =  235 bits (600), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 112/215 (52%), Positives = 158/215 (73%), Gaps = 7/215 (3%)

Query: 1   MRDFLDKCGGYAVIDGGFATELERHGADLHDPLWSAKCLISSPHLVRRVHLDYLDAGANI 60
           ++D ++  GG  V DGGFAT+LE+HGA ++DPLWSA CLI  PHL+++VH++YL+AGA+I
Sbjct: 9   LQDLIENSGGCVVTDGGFATQLEKHGAFINDPLWSAICLIKQPHLIKKVHMEYLEAGADI 68

Query: 61  ILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCTKDSSDFIRDERYRR 120
           ++T+SYQAT+ GF +KG S EEGE+LL+RSV+LA+EAR+ + +   ++  +     +YRR
Sbjct: 69  LVTSSYQATIPGFLSKGLSIEEGESLLQRSVKLAVEARDSFWSSAKRNPGN-----KYRR 123

Query: 121 RPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIAFETIP 180
              LVAAS+GSYGAYLADG+EY G YG  V++  LKDFHR R+++LV+AG DL+AFETIP
Sbjct: 124 A--LVAASIGSYGAYLADGSEYRGLYGPDVSLVKLKDFHRRRLQVLVEAGPDLLAFETIP 181

Query: 181 NKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 215
           NK+             ++IP+W+ F+  D  N  S
Sbjct: 182 NKLEAQACVELLEEINVQIPSWICFTSVDGENAPS 216