Miyakogusa Predicted Gene

Lj1g3v0099460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0099460.1 Non Characterized Hit- tr|I1L858|I1L858_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,50,2e-17,LTP_2,Bifunctional inhibitor/plant lipid transfer
protein/seed storage helical domain; Plant lipid t,CUFF.25204.1
         (267 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g103420.1 | Lipid transfer protein | HC | chr1:46817645-46...   158   6e-39
Medtr5g006940.1 | Lipid transfer protein | HC | chr5:1143135-114...   102   3e-22
Medtr1g071720.1 | Lipid transfer protein | HC | chr1:31856691-31...    76   4e-14
Medtr1g071720.2 | Lipid transfer protein | HC | chr1:31856691-31...    75   4e-14
Medtr7g095250.1 | Lipid transfer protein | HC | chr7:38117812-38...    64   2e-10

>Medtr1g103420.1 | Lipid transfer protein | HC |
           chr1:46817645-46816110 | 20130731
          Length = 217

 Score =  158 bits (399), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/199 (49%), Positives = 107/199 (53%), Gaps = 8/199 (4%)

Query: 71  DAQISTPCNASVLSTLFTPCMXXXXXXXXXXXXXXXXECCGALKSLTSSGMDCLCLLVTA 130
           +AQI+TPCN S +STLFTPCM                ECCGALKSLTSSGM+CLCLLVTA
Sbjct: 25  NAQINTPCNPSTISTLFTPCMGFLTGSSANGTSPTT-ECCGALKSLTSSGMNCLCLLVTA 83

Query: 131 SIPFKLPINRTLAISLPRACNMPGVPVQCKXXXX--XXXXXXXXXXXXXXXXXXXXFTPT 188
           S+PFK+PINRTLAISLPRACNMPGVPVQCK                          F PT
Sbjct: 84  SVPFKIPINRTLAISLPRACNMPGVPVQCKASASPLPAPGPVALGPSHSPASSPSGFIPT 143

Query: 189 PSPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSNLTPSSAMTSY 248
           PSPQ                                           RS+LTPSSA+TSY
Sbjct: 144 PSPQ-----ASSDLPASPTSSPLAPQQDTNVPLLTPPSPSVSTTGSGRSSLTPSSAITSY 198

Query: 249 NVPPSALLIALGFAVLKYY 267
           NV P+ LLIALGF  LKYY
Sbjct: 199 NVSPTVLLIALGFVALKYY 217


>Medtr5g006940.1 | Lipid transfer protein | HC |
           chr5:1143135-1141543 | 20130731
          Length = 212

 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 48/89 (53%), Positives = 63/89 (70%), Gaps = 1/89 (1%)

Query: 72  AQISTPCNASVLSTLFTPCMXXXXXXXXXXXXXXXXECCGALKSLTSSGMDCLCLLVTAS 131
           AQI+TPCN S++S+  +PC+                +CC A+K+LTS   DC+CL+ T +
Sbjct: 26  AQITTPCNMSMISSTISPCLSFLTNSSGNGTSPTA-DCCNAIKTLTSGSKDCMCLIATGN 84

Query: 132 IPFKLPINRTLAISLPRACNMPGVPVQCK 160
           +PF LPINRTLAISLPRACN+PGVP+QCK
Sbjct: 85  VPFALPINRTLAISLPRACNLPGVPLQCK 113


>Medtr1g071720.1 | Lipid transfer protein | HC |
           chr1:31856691-31855319 | 20130731
          Length = 190

 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 3/91 (3%)

Query: 72  AQISTPCNASVLSTLFTPCMXXXXXXXXXXXXXX-XXECCGALKSLTSSGMDCLCLLVTA 130
            QISTPC  S++S+ FTPC                   CC +L+S+ S+ MDC CLL+TA
Sbjct: 26  GQISTPCTTSMISS-FTPCANFITGSTNYNGLITPSSSCCDSLQSMMSTSMDCACLLITA 84

Query: 131 SIPFKL-PINRTLAISLPRACNMPGVPVQCK 160
           ++PF+L PINR L+  LP++CN+ G+  QCK
Sbjct: 85  NVPFQLPPINRVLSFFLPQSCNLNGLHAQCK 115


>Medtr1g071720.2 | Lipid transfer protein | HC |
           chr1:31856691-31855319 | 20130731
          Length = 189

 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 3/91 (3%)

Query: 72  AQISTPCNASVLSTLFTPCMXXXXXXXXXXXXXX-XXECCGALKSLTSSGMDCLCLLVTA 130
            QISTPC  S++S+ FTPC                   CC +L+S+ S+ MDC CLL+TA
Sbjct: 26  GQISTPCTTSMISS-FTPCANFITGSTNYNGLITPSSSCCDSLQSMMSTSMDCACLLITA 84

Query: 131 SIPFKL-PINRTLAISLPRACNMPGVPVQCK 160
           ++PF+L PINR L+  LP++CN+ G+  QCK
Sbjct: 85  NVPFQLPPINRVLSFFLPQSCNLNGLHAQCK 115


>Medtr7g095250.1 | Lipid transfer protein | HC |
           chr7:38117812-38119644 | 20130731
          Length = 180

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 82  VLSTLFTPCMXXXXXXXXXXXXXXXXECCGALKSLTSSGMDCLCLLVTASIP-FKLPINR 140
           ++S+ FTPC                  CC +L+SL S+ MDC CL+++++   F+LPIN+
Sbjct: 1   MISSTFTPC-ANIITGSTNNGLVPSTTCCDSLRSLMSTNMDCACLMMSSNAQIFQLPINQ 59

Query: 141 TLAISLPRACNMPGVPVQCK 160
            LAISL +ACN+ G  VQCK
Sbjct: 60  VLAISLSQACNINGASVQCK 79