Miyakogusa Predicted Gene

Lj1g3v0074750.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0074750.1 tr|B9IJB1|B9IJB1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_825475 PE=4
SV=1,28.76,6e-18,seg,NULL,CUFF.25180.1
         (380 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g065670.1 | transcription factor | HC | chr5:27629590-2762...   413   e-115
Medtr2g009360.2 | transcription factor | HC | chr2:1893844-18901...    89   7e-18
Medtr2g009360.1 | transcription factor | HC | chr2:1893739-18905...    89   7e-18
Medtr3g098450.1 | transcription factor, putative | HC | chr3:449...    74   3e-13

>Medtr5g065670.1 | transcription factor | HC |
           chr5:27629590-27627190 | 20130731
          Length = 440

 Score =  413 bits (1062), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 227/369 (61%), Positives = 268/369 (72%), Gaps = 24/369 (6%)

Query: 22  LNSFGAPLHVGKQNATYAAVNPGVNV--VTRNEGVNVVTSNETVSPSALPPLQLGSANEP 79
           L+S+ AP    K    +AA+NPG+N+  + RNE      S      SA P +QLG++NEP
Sbjct: 81  LSSYCAPSETRK--PAFAAMNPGINMNMIPRNEAAPAYGS------SASPHVQLGNSNEP 132

Query: 80  HGWFYCLPRFRQGFTPAPSSTAEVK-PPASHGKSLRDESVPNRDESLPQKRFLVIDQTGD 138
           HGWFYCLPRFRQGFT  P+ T+E K PPASH K  +++  PN +   PQK+FLV+DQTGD
Sbjct: 133 HGWFYCLPRFRQGFTSPPNFTSEEKLPPASHLKGFKEDIAPNGESGFPQKQFLVVDQTGD 192

Query: 139 QTTLIYSSRFGSPVECLASWDSKLHGPNNLNTHNEPPLRGDVNNVVGVGPALDDKVDE-- 196
           QTT+IYSSRFGSPVECL SWDSKL+G +NLN ++EP LR DVN+V+ VGP  D KVDE  
Sbjct: 193 QTTVIYSSRFGSPVECLGSWDSKLNGCSNLNGNDEPSLRRDVNHVIEVGPTFDYKVDEND 252

Query: 197 NQGTDTESEMHEDTEEINALLXXXXXXXXXXXXXVTSTGHSPSTMTTHDNPAPLL--GAE 254
           NQGT+ ESEMHEDTEEINALL             VTSTGHSPSTMTTH N  P    G  
Sbjct: 253 NQGTEIESEMHEDTEEINALLYSDSDGYSTEDDEVTSTGHSPSTMTTHVNQQPFRIGGTA 312

Query: 255 EEVASSRAGEAKKRKRADGDAYGD-HMQFMDTANSLNPNRPIDI-----EDDDAESRCSS 308
           EEVASS  G+ KKRK  +  AY D  +QFMDTA+SL  NRP D+     +DDDAESRCS 
Sbjct: 313 EEVASSSPGKTKKRKLFNM-AYSDVDVQFMDTASSLKRNRPFDLNRGVDDDDDAESRCSG 371

Query: 309 DNFSQG--EMGSLTGNKKMRKEKIQDVLSVLQHIVPGGKDKDPIQLLDEAIRCLKSLKVK 366
            N+ +G  E+GSLTG+KKMRKEKIQ+VLS+LQ IVP GKDK+PIQLLDEAI CL SLK+K
Sbjct: 372 SNYGRGSPEIGSLTGHKKMRKEKIQNVLSILQCIVPNGKDKEPIQLLDEAIHCLNSLKLK 431

Query: 367 ARALGLDAL 375
           ARALGL+AL
Sbjct: 432 ARALGLNAL 440


>Medtr2g009360.2 | transcription factor | HC | chr2:1893844-1890111
           | 20130731
          Length = 344

 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 41/275 (14%)

Query: 117 SVPNRDESLPQKRFLVIDQTGDQTTLIYSSRF---GSPVECLASW------DSKLHGPNN 167
           ++ N + +  QK+F++ D++  +T L YS  F    SP+     +      + + H   N
Sbjct: 89  AMQNANPAFLQKKFIIFDRSDKKTRLFYSPVFPLVQSPIVTTTQFTQAYDVNQERHA-TN 147

Query: 168 LNTHNEPPLRGDVNNVVGVGPALDDKVDENQGTDTESEMHEDTEEINALLXXXXXXXXXX 227
               + P              +L ++ +++   + ESEMHEDTEEINALL          
Sbjct: 148 FGQKHLPKY------------SLPEESEQDHVVNEESEMHEDTEEINALLCSDDYDSDDD 195

Query: 228 XXXVTSTGHSP-STMTTHDNPAPLLGAEEEVASSRAGEAKKRKRADGDAYGDHMQFMDTA 286
              VTSTGHSP +   T+     +   EE+ ASS     K+ K  DG  Y      +D+A
Sbjct: 196 DE-VTSTGHSPLADERTYLIQEQIEDTEEDTASSDWPN-KRHKLIDG-GYTKLSPLVDSA 252

Query: 287 NSLNPNRPIDIEDDDAESRCSSDNFSQGEM---------GSLTGNKKMRKEKIQDVLSVL 337
           +S+  N P +   D AES+      S G+M          +  G+ +++K+KI++ L +L
Sbjct: 253 SSVRLNEPCECVRD-AESK-----HSDGQMYFARQTEDNSAAVGDIQLKKDKIRETLRIL 306

Query: 338 QHIVPGGKDKDPIQLLDEAIRCLKSLKVKARALGL 372
           + + PG K K P+ ++DE I  LKSL  +   LG+
Sbjct: 307 EKLTPGAKGKHPLLVIDETIDYLKSLMSQTGMLGV 341


>Medtr2g009360.1 | transcription factor | HC | chr2:1893739-1890536
           | 20130731
          Length = 344

 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 41/275 (14%)

Query: 117 SVPNRDESLPQKRFLVIDQTGDQTTLIYSSRF---GSPVECLASW------DSKLHGPNN 167
           ++ N + +  QK+F++ D++  +T L YS  F    SP+     +      + + H   N
Sbjct: 89  AMQNANPAFLQKKFIIFDRSDKKTRLFYSPVFPLVQSPIVTTTQFTQAYDVNQERHA-TN 147

Query: 168 LNTHNEPPLRGDVNNVVGVGPALDDKVDENQGTDTESEMHEDTEEINALLXXXXXXXXXX 227
               + P              +L ++ +++   + ESEMHEDTEEINALL          
Sbjct: 148 FGQKHLPKY------------SLPEESEQDHVVNEESEMHEDTEEINALLCSDDYDSDDD 195

Query: 228 XXXVTSTGHSP-STMTTHDNPAPLLGAEEEVASSRAGEAKKRKRADGDAYGDHMQFMDTA 286
              VTSTGHSP +   T+     +   EE+ ASS     K+ K  DG  Y      +D+A
Sbjct: 196 DE-VTSTGHSPLADERTYLIQEQIEDTEEDTASSDWPN-KRHKLIDG-GYTKLSPLVDSA 252

Query: 287 NSLNPNRPIDIEDDDAESRCSSDNFSQGEM---------GSLTGNKKMRKEKIQDVLSVL 337
           +S+  N P +   D AES+      S G+M          +  G+ +++K+KI++ L +L
Sbjct: 253 SSVRLNEPCECVRD-AESK-----HSDGQMYFARQTEDNSAAVGDIQLKKDKIRETLRIL 306

Query: 338 QHIVPGGKDKDPIQLLDEAIRCLKSLKVKARALGL 372
           + + PG K K P+ ++DE I  LKSL  +   LG+
Sbjct: 307 EKLTPGAKGKHPLLVIDETIDYLKSLMSQTGMLGV 341


>Medtr3g098450.1 | transcription factor, putative | HC |
           chr3:44955915-44955712 | 20130731
          Length = 67

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/65 (66%), Positives = 54/65 (83%), Gaps = 1/65 (1%)

Query: 316 MGSLTGNKKMRKEKIQDVLSVLQHIVPGGKDKDPIQLLDEAIRCLKSLKVKARALGLDAL 375
           MGSLTGNKKMRK KIQD++++LQ I+  G+DKDPIQLLDEAIRCLK LK+K + + L + 
Sbjct: 1   MGSLTGNKKMRKRKIQDLITILQCII-SGEDKDPIQLLDEAIRCLKCLKLKTKLMNLMSC 59

Query: 376 QDGEF 380
           + GEF
Sbjct: 60  KLGEF 64