Miyakogusa Predicted Gene

Lj1g3v0052310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0052310.1 Non Characterized Hit- tr|B7FMX2|B7FMX2_MEDTR
Putative uncharacterized protein (Fragment)
OS=Medicag,81.48,2e-18,seg,NULL; coiled-coil,NULL,CUFF.25159.1
         (514 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g005430.1 | transmembrane protein, putative | HC | chr5:44...   326   3e-89
Medtr1g105890.1 | transmembrane protein, putative | HC | chr1:47...   174   1e-43
Medtr4g097790.1 | transmembrane protein, putative | LC | chr4:40...    68   2e-11

>Medtr5g005430.1 | transmembrane protein, putative | HC |
           chr5:444636-441597 | 20130731
          Length = 560

 Score =  326 bits (835), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 207/384 (53%), Positives = 248/384 (64%), Gaps = 15/384 (3%)

Query: 139 RGAGDDEIDENDQDKPDV-DADRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLENHNSHE 197
           RG  DDE+DEND +KP+V D                                +E++N HE
Sbjct: 182 RGGEDDEMDENDPEKPEVVDRSEEFVDEGKEKEEEGDEKENENSKDEGNQGLVESNNIHE 241

Query: 198 AREENYKGDDASSAVXXXXXXXXXXXXXXXLENSDAIVNSEMSITKSENKPNYTEDSNRN 257
           AREE YKGDDASSAV               +ENSD  VN+EM ITK ENKPNYTED  R+
Sbjct: 242 AREEQYKGDDASSAVTHDTRTTSTETETVSMENSD--VNAEMGITKPENKPNYTEDGIRS 299

Query: 258 QPGSDFKITEVKLTDETSSNATSVKETGDASVSNPVDSSNLNNISMTSSGNHSE-ASGNL 316
           QPGS+F ITEVKL     SN++S  ETG+ S+SNPV  S+ NN ++  S  HSE  S NL
Sbjct: 300 QPGSNFSITEVKLVVGAYSNSSSSNETGNNSLSNPVAGSHQNNTALIYSVRHSEETSSNL 359

Query: 317 TVVIPGASNNMTVTNTSSEHNKVEMFSESSLAQNGTVNITVTEDAKNVQTEGFEQVGNSI 376
           T+V+P A NNM+ T+TSSEHNK+ MFS   + +N TVN TV  D KNVQTEG EQ G  +
Sbjct: 360 TIVVPAAKNNMSGTDTSSEHNKMVMFS--GIDKNDTVNSTVAGDVKNVQTEGLEQGGIIV 417

Query: 377 SEENRPISNSTVPVKTENGAASGADSSNVEGGDIDKATRFVAYNETENKGNSEMSEISKT 436
           S+EN   SN  VPVKTEN AA+G +SSN+EGGDI+K  RFVA NE E+K ++ MSE +KT
Sbjct: 418 SKENLSGSNLAVPVKTENRAAAGDESSNLEGGDIEKTRRFVASNENESKVDTVMSETNKT 477

Query: 437 QNNSYVKENTGATKDEEFNFKGTTQISD---SSSANGTFDSVEHHVTDSL---ILKEVTE 490
           QN SYV ENT A K EE   KG TQ SD   SSS NGT DS++H  TDS    ILK++TE
Sbjct: 478 QNLSYVDENTNAAKYEE--SKGHTQASDASNSSSMNGTSDSIKHQATDSYNSHILKDMTE 535

Query: 491 VRTDPDRLPDIRNVGDN-GDAAAT 513
           V+TD + +PDIRNVGDN GD  AT
Sbjct: 536 VQTDLNTMPDIRNVGDNDGDKTAT 559



 Score =  125 bits (315), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 53/79 (67%), Positives = 66/79 (83%)

Query: 1  MIKRSSSRNQRSKGIKVKHVLQIILLLGVCFWLIYQVKRSHDKKKEFDQTDAKGSVVTQN 60
          MIKRSSSRN RSKG+KVKHVLQI+LL+G+C WLIYQVKRSHDKKKEFD++D K SV  QN
Sbjct: 1  MIKRSSSRNNRSKGVKVKHVLQIMLLVGICLWLIYQVKRSHDKKKEFDESDKKVSVGAQN 60

Query: 61 AYQTPKIHARKFLPDEDKV 79
          AY+  ++  +  LP +++V
Sbjct: 61 AYRITELGRKDLLPGKNEV 79


>Medtr1g105890.1 | transmembrane protein, putative | HC |
           chr1:47816020-47814383 | 20130731
          Length = 545

 Score =  174 bits (442), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 156/408 (38%), Positives = 205/408 (50%), Gaps = 60/408 (14%)

Query: 141 AGDDEIDENDQDKPDVDADRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LENHNSHE 197
            GD EIDEND +K + D DR                                +ENH +HE
Sbjct: 160 GGDVEIDENDHEKSEADNDREDEVVDEEKDKEEEGDDETENEDKEDEEKGGLVENHENHE 219

Query: 198 AREENYKGDDASSAVXXXXXXXXXXXXXXXLENSDAIVNSEMSITKSENKPNYTEDSNRN 257
           AREE+YK DDASSAV               LE+SD  +    +  K EN+ N++++S  +
Sbjct: 220 AREEHYKADDASSAVAHDTHETSTETGN--LEHSDLSL---QNTRKPENETNHSDESYGS 274

Query: 258 QPGSDFKITEVKLTDETSSNATSVKETGDASVSNPVDSSNLNNISMTSSGNHSEASGNLT 317
           Q  SD K+TE +LTD  SSNAT+ KETG+ S SN          + T   +  + S NLT
Sbjct: 275 QNVSDLKVTEGELTDGVSSNATAGKETGNDSFSNET--------AKTKPDSQLDLSSNLT 326

Query: 318 VVIPGASNNMTVT----NTSSEHNKVEMFSESSLAQNGTVNITVTEDAKNVQTEGFEQVG 373
            VI  AS+N + T    ++SSE  K  + SES  AQN TVN T+T D K  QTEG EQ G
Sbjct: 327 AVITEASSNSSGTGDDTSSSSEQIKAVILSESDHAQNATVNTTITGDMK--QTEGLEQSG 384

Query: 374 NSISEENRPISNSTVPVKTENGAASGADSSNVEGGDIDKATRFVAYNETEN--------- 424
           + ISE N P ++S V VK E+  A+  +SS +    ++K T FVA NET N         
Sbjct: 385 SKISEGNLPGNDSIVSVKPESRVAAPEESSTLGASALEKTTGFVASNETVNMSSNLDRNA 444

Query: 425 ----------KGNSEMSEISKTQNNSYVKENTGATKDEEFNFKGTTQIS------DSSSA 468
                     KG++E SE ++ Q       N  AT+DE   FKG TQ        D+SS 
Sbjct: 445 SSDTTESDKSKGSTETSEANEAQ-------NVDATEDE--MFKGDTQTGETDEKLDNSSV 495

Query: 469 NGTFDSVEHHVTDSL----ILKEVTEVRTDPDRLPDIRNVGDNGDAAA 512
               DS+EH   DS     I +++ + RTD D LPDIRN G++ D  A
Sbjct: 496 TEILDSIEHDTIDSSDTQNIHEDMAKARTDLDTLPDIRNEGNDSDENA 543



 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 56/75 (74%), Gaps = 2/75 (2%)

Query: 1  MIKRS-SSRNQRSKGIKVKHVLQIILLLGVCFWLIYQVKRSHDKKKEFDQTDAKGSVVTQ 59
          MIKR+ SSRNQRSKG KVKHVLQ ILLLGVCFWLIYQVK +HDKKKEFD+ D K  + T+
Sbjct: 1  MIKRNPSSRNQRSKGFKVKHVLQAILLLGVCFWLIYQVKHNHDKKKEFDKNDTKLPIRTE 60

Query: 60 NAYQTPKIHARKFLP 74
             Q  K+  +   P
Sbjct: 61 -TDQILKLGRKDLHP 74


>Medtr4g097790.1 | transmembrane protein, putative | LC |
          chr4:40364706-40368281 | 20130731
          Length = 783

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 1/48 (2%)

Query: 1  MIKRSSSRNQRSK-GIKVKHVLQIILLLGVCFWLIYQVKRSHDKKKEF 47
          M + S  R+QRSK G KVKH LQI +L+GVC WL+YQ+  S ++K  +
Sbjct: 1  MFRLSPRRSQRSKNGFKVKHALQICVLVGVCVWLVYQIGHSREQKASY 48