Miyakogusa Predicted Gene

Lj1g3v0052160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0052160.1 Non Characterized Hit- tr|E5GBH0|E5GBH0_CUCME
Putative uncharacterized protein OS=Cucumis melo
subsp,40.53,3e-19,seg,NULL,CUFF.25146.1
         (202 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g005230.1 | hypothetical protein | HC | chr5:336081-337571...   150   6e-37
Medtr1g106080.1 | hypothetical protein | HC | chr1:48012079-4801...    91   9e-19
Medtr3g103260.1 | hypothetical protein | HC | chr3:47591934-4759...    51   9e-07

>Medtr5g005230.1 | hypothetical protein | HC | chr5:336081-337571 |
           20130731
          Length = 185

 Score =  150 bits (380), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 95/188 (50%), Positives = 116/188 (61%), Gaps = 23/188 (12%)

Query: 20  WTLYLDNAXXXXXXXXXXXXXXXXXXXXXXXXXXNRKATNEEEDDGEKDLSMVSDASSGP 79
           WTLYLD +                          ++KA N E+ D E+DLSMVSDASSGP
Sbjct: 16  WTLYLDRSLNTSQSHTPSLGCYEETK--------HKKAQNIEDSD-EEDLSMVSDASSGP 66

Query: 80  PHFSHHIEPNIAPDHTVSK----LAKRSKKRQKVKQTQHLLQDPSFLDDTASSPLFDNDF 135
           PH   +     A D + SK    +AKRSKKRQKV++  ++ Q    LDDTASSPLFDN+ 
Sbjct: 67  PHHDSYFN---AQDCSASKPTKLVAKRSKKRQKVQENNNIQQ---HLDDTASSPLFDNN- 119

Query: 136 SMXXXXXXXXXXSTESVLELDYSQGFSATYFEERSSLHHHFGFLKPSLSENQVH-NNKWY 194
           ++          +TES+L  DYSQGFSATYFEERSSL  HFGFL+PSLS+N+ H N KWY
Sbjct: 120 NVVTMSNQQTTSTTESML--DYSQGFSATYFEERSSLQDHFGFLQPSLSQNEAHINKKWY 177

Query: 195 GMKEMGMI 202
           G +EMGMI
Sbjct: 178 GGEEMGMI 185


>Medtr1g106080.1 | hypothetical protein | HC |
           chr1:48012079-48011115 | 20130731
          Length = 198

 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 89/157 (56%), Gaps = 20/157 (12%)

Query: 54  NRKATNEEEDDGEKDLSMVSDASSGPPHFSH------HIEPNIAPDHTVSKLAKRSKKRQ 107
           +++ TNE  ++G +DLSMVSDASSGPPH  +      + + N+   H      ++ ++ +
Sbjct: 45  DKRVTNEYSEEGVEDLSMVSDASSGPPHLPYDDDVYFNEKDNVVKKHKKGTKKQKVRENK 104

Query: 108 K----VKQTQHLLQDPSFLDDTASSPLFDNDFSMXXXXXXXXXXSTESVLELDYSQGFSA 163
           +    V+  QHL   PSFL DTASS +F  DFS              ++  +DYSQGFSA
Sbjct: 105 QHAIAVEDQQHL---PSFLHDTASSHVF--DFSTNNVVGTNQQNYVGNM--VDYSQGFSA 157

Query: 164 T--YFEERSSLHHH-FGFLKPSLSENQVHNNKWYGMK 197
           T  YFE +SS     FGFL+P LS+N +  N WYG K
Sbjct: 158 TNNYFEGKSSYQEEKFGFLQPPLSKNDLQGNNWYGGK 194


>Medtr3g103260.1 | hypothetical protein | HC |
           chr3:47591934-47592702 | 20130731
          Length = 147

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 7/113 (6%)

Query: 68  DLSMVSDASSGPPHFSHHIEPNIAPDHTVS-KLAKRSKKRQKVKQTQHLLQDPSFLDDTA 126
           DLSMVSDASSGPP + +H+E N    + V+   +   + ++K K+     Q  S LDDTA
Sbjct: 22  DLSMVSDASSGPPQY-YHVEENYQQPYCVNWHSSTSKESKKKGKEYGRKSQQSSPLDDTA 80

Query: 127 SSPLFDNDFSMXXXXXXXXXXSTESVLELDYSQGFSATYFEERSSLHHHFGFL 179
           SSP+ +   +           +T     LD+S  FSAT  + +S L  H  FL
Sbjct: 81  SSPVLNYPKNKVNFSENGAVENT-----LDFSPSFSATRTKRKSKLQKHSSFL 128