Miyakogusa Predicted Gene

Lj1g3v0013230.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0013230.1 tr|O22512|O22512_SOYBN Grr1 OS=Glycine max
GN=grr1 PE=2 SV=1,46.05,0.00000000004,
,NODE_34412_length_216_cov_656.555542.path3.1
         (68 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g012520.1 | EIN3-binding F-box-like protein | HC | chr1:25...    57   4e-09
Medtr3g107280.1 | EIN3-binding F-box-like protein | HC | chr3:49...    51   3e-07

>Medtr1g012520.1 | EIN3-binding F-box-like protein | HC |
          chr1:2502649-2506197 | 20130731
          Length = 643

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/27 (81%), Positives = 26/27 (96%)

Query: 41 QWLEQKQETSIETLPDECLFEIFRKLP 67
          +W EQKQ+TSIE+LPDECLFEIFR+LP
Sbjct: 55 EWFEQKQKTSIESLPDECLFEIFRRLP 81


>Medtr3g107280.1 | EIN3-binding F-box-like protein | HC |
          chr3:49486587-49482963 | 20130731
          Length = 641

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/27 (74%), Positives = 23/27 (85%)

Query: 41 QWLEQKQETSIETLPDECLFEIFRKLP 67
          +W + K ETSIETLPDECLFEI R+LP
Sbjct: 58 KWFDLKPETSIETLPDECLFEILRRLP 84