Miyakogusa Predicted Gene
- Lj0g3v0364159.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0364159.1 Non Characterized Hit- tr|B9RZG9|B9RZG9_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,34.52,1e-16,B3,B3 DNA binding domain; no description,DNA-binding
pseudobarrel domain; DNA-binding pseudobarrel d,CUFF.25085.1
(191 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g108780.1 | transcriptional factor B3 family protein | HC ... 143 8e-35
Medtr8g103940.1 | transcriptional factor B3 family protein | LC ... 124 6e-29
Medtr1g035460.1 | plant-specific B3-DNA-binding domain protein |... 102 2e-22
Medtr1g035490.1 | B3 DNA-binding domain protein | LC | chr1:1288... 78 6e-15
Medtr1g035570.1 | B3 DNA-binding domain protein | LC | chr1:1295... 77 7e-15
Medtr6g061070.1 | B3 DNA-binding domain protein | LC | chr6:2111... 73 2e-13
Medtr3g061300.1 | B3 DNA-binding domain protein | LC | chr3:2434... 72 4e-13
Medtr3g061310.1 | transcriptional factor B3 family protein | LC ... 71 7e-13
Medtr3g061370.1 | plant-specific B3-DNA-binding domain protein |... 64 1e-10
Medtr3g061340.1 | transcriptional factor B3 family protein | LC ... 63 2e-10
Medtr3g061320.1 | plant-specific B3-DNA-binding domain protein |... 62 2e-10
Medtr7g050710.1 | plant-specific B3-DNA-binding domain protein |... 62 3e-10
Medtr3g061350.1 | plant-specific B3-DNA-binding domain protein |... 61 7e-10
Medtr4g068320.1 | B3 domain transcription factor VRN1-like prote... 60 1e-09
Medtr3g098790.1 | plant-specific B3-DNA-binding domain protein |... 60 1e-09
Medtr1g034240.1 | B3 domain transcription factor VRN1-like prote... 58 4e-09
Medtr7g050580.1 | plant-specific B3-DNA-binding domain protein |... 55 5e-08
Medtr1g035540.1 | hypothetical protein | LC | chr1:12929898-1292... 54 7e-08
Medtr7g050720.1 | transcriptional factor B3 family protein | LC ... 52 3e-07
Medtr3g005490.1 | B3 DNA-binding domain protein | LC | chr3:2236... 51 6e-07
Medtr1g034210.1 | B3 domain transcription factor VRN1-like prote... 51 8e-07
Medtr5g044670.1 | B3 DNA-binding domain protein | LC | chr5:1960... 50 9e-07
Medtr1g021270.1 | B3 DNA-binding domain protein | HC | chr1:6335... 49 3e-06
Medtr3g005420.1 | B3 DNA-binding domain protein | LC | chr3:1995... 49 3e-06
Medtr3g005420.2 | B3 DNA-binding domain protein | LC | chr3:1992... 49 4e-06
Medtr5g070440.1 | B3 DNA-binding domain protein | LC | chr5:2983... 48 5e-06
Medtr1g098450.1 | B3 DNA-binding domain protein | LC | chr1:4432... 47 8e-06
>Medtr1g108780.1 | transcriptional factor B3 family protein | HC |
chr1:49164002-49166141 | 20130731
Length = 461
Score = 143 bits (361), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 125/233 (53%), Gaps = 46/233 (19%)
Query: 2 KKGDIRLERLDG-RTWKVYYSFFKLGGGWKKFATDNNLKVGDICVFELTKREPLSLKVLI 60
++ +I L+ LD RTW V Y K+ GWK F +DNNLK+GD+C+FE+ + + KVLI
Sbjct: 229 QQSEIALQVLDDERTWIVKYCLRKMSNGWKTFVSDNNLKLGDVCLFEMINSKSYAFKVLI 288
Query: 61 FPV--AQGGVP-----------------------------------SSLGPH---FTNA- 79
F V Q +P +SL F N+
Sbjct: 289 FRVDEEQHSLPPQVHGDGVNWLETAGITEVKSKTIMSYKGTKETQRNSLQARPCSFKNSE 348
Query: 80 AQREARKYTP--KNPSFTVSLNPVIKPAYRPPVPISFIREYLNEKKQIINLKIEEKLWPV 137
A++EA ++T + P+FT++L YRP V SF +YL KK+ L+ EEKLWPV
Sbjct: 349 AKKEANQFTSTLEKPNFTINLRSSHWDVYRPRVRNSFSSKYLGPKKKTAMLQFEEKLWPV 408
Query: 138 EFIYYPEFGLGKLSKGWIIFAKESKLVGGDVCVFELINKDEENPVLEVHIFKG 190
+ +YYP KL +GW +F +E+KL GDVCVF L NK E+ VL+VHIF+G
Sbjct: 409 QLMYYPSEPATKLGEGWSLFVEENKLQAGDVCVFVLANK--EDVVLDVHIFRG 459
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Query: 80 AQREARKYTPKNPSFTVSLNPVIKPAYRPPVPISFIREYLNEKKQIINLKI--EEKLWPV 137
A +A+ Y NP FT + Y VP++F ++YL E++ I L++ +E+ W V
Sbjct: 188 ALNKAKNYESNNPFFTAIMTYSYVNQYMH-VPLNFEQKYLKEQQSEIALQVLDDERTWIV 246
Query: 138 EFIYYPEFGLGKLSKGWIIFAKESKLVGGDVCVFELIN 175
++ L K+S GW F ++ L GDVC+FE+IN
Sbjct: 247 KYC------LRKMSNGWKTFVSDNNLKLGDVCLFEMIN 278
>Medtr8g103940.1 | transcriptional factor B3 family protein | LC |
chr8:43749832-43752569 | 20130731
Length = 498
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 112/230 (48%), Gaps = 44/230 (19%)
Query: 2 KKGDIRLERLD-GRTWKVYYSFFKLGGGWKKFATDNNLKVGDICVFELTKREPLSLKVLI 60
K+ I L+ LD GRTW V + + GWKKFA DNNLKVGD+C+FE+ K + KVLI
Sbjct: 270 KQSVIVLQVLDNGRTWNVKHWGRHVSTGWKKFAFDNNLKVGDVCLFEMIKSNAYAFKVLI 329
Query: 61 F--------------------------------------PVAQGGVPSSLGPHFTNAAQR 82
F Q + +S ++ ++
Sbjct: 330 FRLGEEHSLPPQVHGDGVNWVETARIPGVECKTMSYKGKKATQNSLHASSCSFKSSEVKK 389
Query: 83 EARKY--TPKNPSFTVSLNPVIKPAYRPPVPISFIREYLNEKKQIINLKIEEKLWPVEFI 140
E+ ++ T KNP FT+ + Y+P + SF +YL KK I+ L+ + LW V
Sbjct: 390 ESDQFASTLKNPHFTIKVISSHADVYKPRIHNSFSEKYLCHKK-IVTLQFNKNLWHVRLA 448
Query: 141 YYPEFGLGKLSKGWIIFAKESKLVGGDVCVFELINKDEENPVLEVHIFKG 190
P KLS GW F +E+KL GDVCVFEL+NK E+ V + HIF+G
Sbjct: 449 SCPSEPSTKLSTGWSKFVEENKLEAGDVCVFELVNK--EDLVFDAHIFRG 496
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 80 AQREARKYTPKNPSFTVSLNPVIKPAYRPPVPISFIREYLNEKKQIINLKIEE--KLWPV 137
A +A+ Y NP FTV + Y +P+ F ++Y+ EK+ +I L++ + + W V
Sbjct: 229 ALNKAKNYKTNNPFFTVVMTYSYANKYMY-IPVDFEQKYMKEKQSVIVLQVLDNGRTWNV 287
Query: 138 EFIYYPEFGLGKLSKGWIIFAKESKLVGGDVCVFELI 174
+ +G +S GW FA ++ L GDVC+FE+I
Sbjct: 288 K-----HWGR-HVSTGWKKFAFDNNLKVGDVCLFEMI 318
>Medtr1g035460.1 | plant-specific B3-DNA-binding domain protein | LC
| chr1:12873695-12875594 | 20130731
Length = 396
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 84/171 (49%), Gaps = 39/171 (22%)
Query: 2 KKGDIRLERLDGRTWKVYYSFFKLGGGWKKFATDNNLKVGDICVFELTKREPLSLKVLIF 61
++ DI L+ LDGR W Y K+ GGWKKFA N LK+GD+C+FELTK + L+LKV+IF
Sbjct: 227 EQSDILLQLLDGRVWDAKYCSAKINGGWKKFAVHNKLKIGDVCIFELTKSQYLTLKVIIF 286
Query: 62 PVAQGGVPSSLGPH-------------------------------------FTNAAQREA 84
+ + P S P TN A+ +A
Sbjct: 287 RLEED--PHSPSPQESIQRDKDFSDVESETIMTNKEEKATQKTSLRTKAEFLTNEAENQA 344
Query: 85 RKYTPKNPSFTVSLNPVIKPAYRPPVPISFIREYLNEKKQIINLKIEEKLW 135
K+ K P F V + P + R VP SFI YL+ K+Q++ LK +KLW
Sbjct: 345 DKFKSKYPFFKVDIMPNQRGHSRLLVPNSFITNYLDNKEQMVMLKFGKKLW 395
>Medtr1g035490.1 | B3 DNA-binding domain protein | LC |
chr1:12887655-12885322 | 20130731
Length = 332
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 81/179 (45%), Gaps = 26/179 (14%)
Query: 25 LGGGWKKFATDNNLKVGDICVFELTKREPLSLKVLIFPVAQG---GVP------------ 69
+GGGWK F NL+V D+C FE+ +R P S V I G GVP
Sbjct: 159 VGGGWKIFREKYNLQVDDVCKFEMIQRRPFSFTVTITRARNGPSEGVPCGNNVVKQKDIE 218
Query: 70 -SSLGPHFTNAAQREARKYTPKNPSFTVSLNPVIKPAYRPPVPISFIREYLNEKKQIINL 128
+S G E R N +L ++K P VP F+++ NE I+ L
Sbjct: 219 GTSSGSRPKENFLDEGRDVMKHN-----TLKVLVKNKA-PSVPKEFMKKGSNE--NIVEL 270
Query: 129 KIEEKLWPVEFIYYPEFGLGKLSKGWIIFAKESKLVGGDVCVFELINKDEENPVLEVHI 187
K+ K W V+ YY + +KGW F +E K+ GD C+F LI DE V +V I
Sbjct: 271 KMGRKSWFVKVNYYESVHGWRFNKGWRKFMEECKVEIGDTCLFNLI--DERKFVFDVSI 327
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 79 AAQREARKY--TPKNPSFTVSLNPVIKPAYRPPVPISFIREYLNEKKQIINLKI-EEKLW 135
A ++ARKY +NP F V + Y VP F RE+LN K +++ E+
Sbjct: 85 AMVKKARKYPTVNENPFFVVIMTQSYTNGYFLWVPSKFSREHLNNFKGTATIRVGNERSV 144
Query: 136 PVEFIYYPEFGLGKLSKGWIIFAKESKLVGGDVCVFELINK 176
V YY + GW IF ++ L DVC FE+I +
Sbjct: 145 EVSLRYYDTKDKSCVGGGWKIFREKYNLQVDDVCKFEMIQR 185
>Medtr1g035570.1 | B3 DNA-binding domain protein | LC |
chr1:12954107-12956283 | 20130731
Length = 406
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 76/165 (46%), Gaps = 23/165 (13%)
Query: 25 LGGGWKKFATDNNLKVGDICVFELTKREPLSLKVLIFPVAQGGVPSSL--GPHFTNAAQR 82
LGGGWK F NL+V D+C FE+ +R P V I + +P L GP
Sbjct: 250 LGGGWKIFREKYNLQVDDVCKFEMIQRRPFLFTVTITRAGKEPIPKKLLEGPDVM----- 304
Query: 83 EARKYTPKNPSFTVSLNPVIKPAYRPPVPISFIREYLNEKKQIINLKIEEKLWPVEFIYY 142
+ YT K V+ P VP F++ +E I+ LK+ K W V+ YY
Sbjct: 305 --KPYTFK----------VLVKNTAPSVPKEFMKRGCHE--NIVELKMGRKSWFVKVNYY 350
Query: 143 PEFGLGKLSKGWIIFAKESKLVGGDVCVFELINKDEENPVLEVHI 187
+ SKGW F KE K+ GD C+ +LI DE V +V I
Sbjct: 351 ESICGCRFSKGWRKFMKECKVEIGDTCLLKLI--DERKFVFDVSI 393
>Medtr6g061070.1 | B3 DNA-binding domain protein | LC |
chr6:21113921-21116898 | 20130731
Length = 473
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 81/191 (42%), Gaps = 26/191 (13%)
Query: 21 SFFKLGGGWKKFATDNNLKVGDICVFELTKREPLSLKVLIFPV--------------AQG 66
S F + GWK F +++LK+GD C FE+T+REPLS + I P QG
Sbjct: 281 SSFVMQVGWKSFTKEHDLKIGDACKFEMTQREPLSFTITIIPAPKEPSLEQFQENQRVQG 340
Query: 67 GVPSSL--GPHFTNAAQREARKYTPKNPSFTVSLNPVIKPAYRPPVPI--------SFIR 116
++ + + K K S++P ++ V S ++
Sbjct: 341 KSVTTRVEDMEYVGNFGEGSSKSCTKTHGLRNSVSPDSHEKFKVFVTSLDKLIVLPSLLK 400
Query: 117 EYLNEKKQIINLKIEEKLWPVEFIYYPEFGLGKLSKGWIIFAKESKLVGGDVCVFELINK 176
+ + LK+ E W VE Y G +KGW F +E + GD C+FELI
Sbjct: 401 RHNIFSGDSVELKVGEGTWFVEVSYNQYLDYGWFTKGWPEFVRECNVKIGDTCLFELI-- 458
Query: 177 DEENPVLEVHI 187
D +N V EV I
Sbjct: 459 DVQNHVFEVSI 469
>Medtr3g061300.1 | B3 DNA-binding domain protein | LC |
chr3:24346545-24347031 | 20130731
Length = 127
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
Query: 80 AQREARKYTPKNPSFTVSLNPVIKPAYRPPVPISFIREYLNEKKQIINLKIEEKLWPVEF 139
AQ A K+ NP FT+ +NP R VP + + K++ + L+I ++ W ++
Sbjct: 18 AQEVALKFISTNPFFTILINPTHLAENRVCVPT--LNGVIENKEKYVMLQIGKRSWNLKL 75
Query: 140 IYYPEF-GLGKLSKGWIIFAKESKLVGGDVCVFELINKDEENPVLEVHIFKG 190
+ Y E + +LS GW +FA+ES L GDVCVFELINK ++ V +HI K
Sbjct: 76 LPYCEARNVRRLSAGWSLFARESGLQAGDVCVFELINK--KDLVFNIHITKS 125
>Medtr3g061310.1 | transcriptional factor B3 family protein | LC |
chr3:24351032-24352721 | 20130731
Length = 285
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 70 SSLGPHFTNAAQREARKYTPKNPSFTVSLNPVIKPAYRPPVPISFIREYLNEKKQIINLK 129
SSL + A K+T NP FT+ + P A RP VP ++ + K++ + L+
Sbjct: 168 SSLNRSNRARVEEVAAKFTSSNPFFTILILPNHLVAGRPRVPNIHLKGVIENKEKNLVLQ 227
Query: 130 IEEKLWPVEFIYYPEFGLG-KLSKGWIIFAKESKLVGGDVCVFELINKDEENPVLEVHIF 188
I E+ W V+ + E G +LS GW +F ES L +VCVFELINK EN V +VH+F
Sbjct: 228 IGERSWKVKLLASYERETGRRLSAGWSLFVNESGLQPENVCVFELINK--ENLVFKVHVF 285
>Medtr3g061370.1 | plant-specific B3-DNA-binding domain protein | HC
| chr3:24369308-24370598 | 20130731
Length = 281
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 80 AQREARKYTPKNPSFTVSLNPVIKPAYRPPVPISFIREYLNEKKQIINLKIEEKLWPVEF 139
AQ A+ + NP FT+ + P+ + VP ++ + K + L I ++ W V+
Sbjct: 176 AQEVAQNFISCNPFFTILIKPINLVEHTRSVPD--LKGVIENKDTNVMLLIGKRSWNVKL 233
Query: 140 IYYPEFGLGK-LSKGWIIFAKESKLVGGDVCVFELINKDEENPVLEVHIF 188
+ E G+ LS GW +FA+ES L GDVCVFELINK ++ V ++H++
Sbjct: 234 LRSYEGKNGRRLSAGWYLFARESGLKSGDVCVFELINK--KDLVFKIHVY 281
>Medtr3g061340.1 | transcriptional factor B3 family protein | LC |
chr3:24361666-24362971 | 20130731
Length = 274
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 80 AQREARKYTPKNPSFTVSLNPVIKPAYRPPVPISFIREYLNEKKQIINLKIEEKLWPVEF 139
A+ A K+ NP FT+ + P R VP + + K++ + L+I ++ W V+
Sbjct: 169 AREVAAKFISSNPFFTILIKPNHLVETRLCVP--NLEGVIENKEKYVVLQIGKRSWNVKL 226
Query: 140 IYYPEFGLGK-LSKGWIIFAKESKLVGGDVCVFELINKDEENPVLEVHIF 188
+ Y E G+ LS GW +FA ES L GDVCVFEL NK ++ V ++H+
Sbjct: 227 LRYYEAKNGRHLSAGWSLFASESGLQSGDVCVFELTNK--QDLVFKIHVL 274
>Medtr3g061320.1 | plant-specific B3-DNA-binding domain protein | LC
| chr3:24354366-24356126 | 20130731
Length = 279
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 80 AQREARKYTPKNPSFTVSLNPVIKPAYRPPVPISFIREYLNEKKQIINLKIEEKLWPVEF 139
AQ A+ + NP FT+ + P A R VP + + K++ + L+I ++ W V+
Sbjct: 174 AQEVAQNFISCNPFFTILIKPNHLVANRLNVP--NFKGVIENKEKDVMLQIGKRSWNVKL 231
Query: 140 IYYPEFGLGK-LSKGWIIFAKESKLVGGDVCVFELINKDEENPVLEVHIF 188
+ + + G+ LS W +FA+ES L G+VCVFELINK E V +VH+F
Sbjct: 232 LCWYKHTQGRRLSARWSLFARESGLQQGNVCVFELINK--EGLVFKVHVF 279
>Medtr7g050710.1 | plant-specific B3-DNA-binding domain protein | LC
| chr7:17605025-17607057 | 20130731
Length = 324
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 10/70 (14%)
Query: 2 KKGDIRLERLDGRTWKVYYSF----------FKLGGGWKKFATDNNLKVGDICVFELTKR 51
K+ DI+L+ L+GR W YS F+L GW++FA DNNLKVGD+C FEL
Sbjct: 237 KREDIQLQALNGRVWSARYSTRNRTSDNGIRFELTSGWEEFAKDNNLKVGDVCKFELISS 296
Query: 52 EPLSLKVLIF 61
L+ V +F
Sbjct: 297 TILTFIVHVF 306
>Medtr3g061350.1 | plant-specific B3-DNA-binding domain protein | LC
| chr3:24365409-24364010 | 20130731
Length = 284
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 80 AQREARKYTPKNPSFTVSLNPVIKPAYRPPVPISFIREYLNEKKQIINLKIEEKLWPVEF 139
AQ A+ + NP FTV +NP A + VP ++ + K + L I ++ W V+
Sbjct: 179 AQEVAQNFISCNPFFTVLINPNDLEANQLSVPD--LKGVIENKDTNVMLLIGKRSWNVKL 236
Query: 140 IYYPEFGLGK-LSKGWIIFAKESKLVGGDVCVFELINKDEENPVLEVHIF 188
+ E + LS GW +F ES L GDVCVFELINK ++ V +VH++
Sbjct: 237 LRCYEGKYNRRLSAGWHLFLTESGLKSGDVCVFELINK--KDLVFKVHVY 284
>Medtr4g068320.1 | B3 domain transcription factor VRN1-like protein
| HC | chr4:25619387-25622490 | 20130731
Length = 429
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 84 ARKYTPKNPSFTVSLNPVIKPAYRPPV---PISFIREYLNEKKQIINLKIEE-KLWPVEF 139
A+ + P NP V L P YR + P F + LN II L+I + + WPV
Sbjct: 285 AKTFEPSNPFCRVVLRPSY--LYRGCIMYLPSCFAEKNLNGVSGIIKLQISDGRQWPVRC 342
Query: 140 IYYPEFGLGKLSKGWIIFAKESKLVGGDVCVFELINKDEENPVLEVHIFK 189
+Y G KLS+GW F+ E+ L GDVCVFEL+ E VL+V +F+
Sbjct: 343 LY--RGGRAKLSQGWFEFSLENNLGEGDVCVFELVATKE--VVLQVTVFR 388
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 4 GDIRLERLDGRTWKVYYSF----FKLGGGWKKFATDNNLKVGDICVFELTKREPLSLKVL 59
G I+L+ DGR W V + KL GW +F+ +NNL GD+CVFEL + + L+V
Sbjct: 326 GIIKLQISDGRQWPVRCLYRGGRAKLSQGWFEFSLENNLGEGDVCVFELVATKEVVLQVT 385
Query: 60 IFPVAQGGVPSSLGP 74
+F + + P S P
Sbjct: 386 VFRITEDEGPLSPQP 400
>Medtr3g098790.1 | plant-specific B3-DNA-binding domain protein | LC
| chr3:45269198-45271140 | 20130731
Length = 328
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 2 KKGDIRLERLDGRTWKVYYSF--------FKLGGGWKKFATDNNLKVGDICVFELTKREP 53
K+GDI + +GR W Y F+L GWK FA DNNLKVGD C FEL
Sbjct: 231 KRGDIHFQLSNGRVWPAKYRIRMSHTGLRFELSSGWKTFAKDNNLKVGDACNFELILSTN 290
Query: 54 LSLKVLIF 61
++ +V IF
Sbjct: 291 MTFQVHIF 298
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 83 EARKYTPKNPSFTVSLNP-VIKPAYRPPVPISFIREY--LNEKKQIINLKIEE-KLWPVE 138
A+ + NPSF V + ++ + +P F + + LN+K+ I+ ++ ++WP +
Sbjct: 189 RAKSFKTCNPSFVVVMGASYVEHHFLLTIPSMFGKRHFDLNKKRGDIHFQLSNGRVWPAK 248
Query: 139 F-IYYPEFGLG-KLSKGWIIFAKESKLVGGDVCVFELINKDEENPVLEVHIFK 189
+ I GL +LS GW FAK++ L GD C FELI N +VHIF+
Sbjct: 249 YRIRMSHTGLRFELSSGWKTFAKDNNLKVGDACNFELI--LSTNMTFQVHIFR 299
>Medtr1g034240.1 | B3 domain transcription factor VRN1-like protein
| HC | chr1:12442470-12446398 | 20130731
Length = 433
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 80 AQREARKYTPKNPSFTVSLNPVIKPAYRPPV---PISFIREYLNEKKQIINLKIEE-KLW 135
A E++ + P NP V L P YR + P F + LN I L+I + + W
Sbjct: 285 AINESKTFEPTNPFCRVVLRPSY--LYRGCIMYLPSCFAEKNLNGVSGFIKLQISDGRQW 342
Query: 136 PVEFIYYPEFGLGKLSKGWIIFAKESKLVGGDVCVFELINKDEENPVLEVHIFK 189
PV +Y + G KLS+GW F E+ L GD+CVFEL+ E VL+V +F+
Sbjct: 343 PVRCLY--KGGRAKLSQGWYEFTLENNLGEGDICVFELLRTRE--VVLQVTLFR 392
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 3 KGDIRLERLDGRTWKVYYSF----FKLGGGWKKFATDNNLKVGDICVFELTKREPLSLKV 58
G I+L+ DGR W V + KL GW +F +NNL GDICVFEL + + L+V
Sbjct: 329 SGFIKLQISDGRQWPVRCLYKGGRAKLSQGWYEFTLENNLGEGDICVFELLRTREVVLQV 388
Query: 59 LIFPVAQ 65
+F V +
Sbjct: 389 TLFRVKE 395
>Medtr7g050580.1 | plant-specific B3-DNA-binding domain protein | LC
| chr7:16867490-16869294 | 20130731
Length = 315
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 2 KKGDIRLERLDGRTWKVYYSF--------FKLGGGWKKFATDNNLKVGDICVFELTKREP 53
K+GDI + L+ W +S F++ GGWK FA DN LKVGD+C FEL
Sbjct: 222 KRGDIHFQVLNEGVWPTRFSIRKSRTGLQFEITGGWKAFAEDNKLKVGDVCKFELISCTI 281
Query: 54 LSLKVLIF 61
L+ V IF
Sbjct: 282 LTFIVHIF 289
>Medtr1g035540.1 | hypothetical protein | LC |
chr1:12929898-12928152 | 20130731
Length = 137
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 28 GWKKFATDNNLKVGDICVFELTKREPLSLKVLIFPVAQGGVP 69
GWK F+ +++LKVGD+C FE+ +REPLS ++I P + P
Sbjct: 32 GWKSFSKEHDLKVGDVCKFEMAQREPLSFTIIIIPATEEPCP 73
>Medtr7g050720.1 | transcriptional factor B3 family protein | LC |
chr7:17612279-17615149 | 20130731
Length = 320
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 30/57 (52%), Gaps = 10/57 (17%)
Query: 2 KKGDIRLERLDGRTWKVYY----------SFFKLGGGWKKFATDNNLKVGDICVFEL 48
KKGDI L L+G+ W Y F WK FA DNNLKVGD+C FEL
Sbjct: 244 KKGDIHLRLLNGKVWPARYLIRKGNRKGEKFEMYSSEWKTFAEDNNLKVGDVCTFEL 300
>Medtr3g005490.1 | B3 DNA-binding domain protein | LC |
chr3:223656-221449 | 20130731
Length = 265
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 6 IRLERLDGRTWKVY--------YSFFKLGGGWKKFATDNNLKVGDICVFELTKREPLSLK 57
I+++ G W+V+ S K+ G+ F DNNL GD CVFEL K PL LK
Sbjct: 195 IKIQTSHGEQWEVFGILHDANSSSAMKITRGFSIFQRDNNLSHGDYCVFELIKNNPLVLK 254
Query: 58 VLIFPVAQGG 67
V +F A G
Sbjct: 255 VTMFRAADYG 264
>Medtr1g034210.1 | B3 domain transcription factor VRN1-like protein
| LC | chr1:12425305-12428923 | 20130731
Length = 370
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 68/148 (45%), Gaps = 13/148 (8%)
Query: 47 ELTKREPLSLKVLIFPVAQGGVPSSLGPHFTNAAQREARKYTPKNPSFTVSLNPVIKPAY 106
+L+ +E S + + + A V ++ A EA + P NP VSL P Y
Sbjct: 219 DLSAQEA-STENVAYESASARVRHNVSDEERERAMNEANAFEPTNPYCRVSLRPSY--LY 275
Query: 107 RPPV---PISFIREYLNEKKQIINLKIE--EKLWPVEFIYYPEFGLGKLSKGWIIFAKES 161
R + P F R L I L+ EK W V + G KLS+GW F +E+
Sbjct: 276 RGCIMYLPTKF-RANLKGVSGFIPLQTSDGEKQWRVRCL--DNEGRIKLSQGWYEFTQEN 332
Query: 162 KLVGGDVCVFELINKDEENPVLEVHIFK 189
L GD+CVFEL+N VL+V +F+
Sbjct: 333 GLGEGDICVFELLNT--RYVVLQVTLFR 358
>Medtr5g044670.1 | B3 DNA-binding domain protein | LC |
chr5:19602773-19604212 | 20130731
Length = 330
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 80 AQREARKYTPKNPSFTVSLNP-VIKPAYRPPVPISFIREYLNEKKQIINLKI--EEKLWP 136
+R A + NP F L+P ++ + +P SF +EYLN K I + E+K W
Sbjct: 196 TKRRAMNFHSDNPFFIRPLHPSYLEHMF---IPTSFSKEYLNGKNGIATVLFGDEDKTWR 252
Query: 137 VEFIYYPEFGLGKLSKGWIIFAKESKLVGGDVCVFELINKDEENPVLEVHIFKG 190
+ F + ++ GW E GD CVFE+ D N +VHI +
Sbjct: 253 LNFKFNDTTNRALITSGWGQIVDEYNFKVGDTCVFEMT--DSTNIFFKVHIVRA 304
>Medtr1g021270.1 | B3 DNA-binding domain protein | HC |
chr1:6335039-6339850 | 20130731
Length = 596
Score = 48.9 bits (115), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 16/107 (14%)
Query: 3 KGDIRLERLDGRTWKV-------YYSFFKLGGGWKKFATDNNLKVGDICVFELTKREPLS 55
K I L L G W V ++ L GGW F N++KVGD+C+FEL +
Sbjct: 285 KTKIILYNLKGEHWTVNSVPTTRVHTSHTLCGGWMAFVRGNSIKVGDVCIFELIRE--CE 342
Query: 56 LKVLIFPVAQGGVPSSLG-------PHFTNAAQREARKYTPKNPSFT 95
L+V I V + G+ +G + A +Y PK P +
Sbjct: 343 LRVRIAEVGKDGLDCQVGKLACSMLSERHDVASHNTSRYMPKKPKVS 389
>Medtr3g005420.1 | B3 DNA-binding domain protein | LC |
chr3:199501-196328 | 20130731
Length = 542
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 7 RLERLDGRTWKVYY-------SFFKLGGGWKKFATDNNLKVGDICVFELTKREPLSLKVL 59
+L+ DG+ W+V+ S ++ G+ F TDNNL D CV+EL K++P+ L+V
Sbjct: 474 KLQNSDGKQWEVFCVPNTVGSSSMRIVKGFSNFVTDNNLSHRDYCVYELIKKKPVVLEVT 533
Query: 60 IF 61
+F
Sbjct: 534 MF 535
>Medtr3g005420.2 | B3 DNA-binding domain protein | LC |
chr3:199288-196360 | 20130731
Length = 488
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 6 IRLERLDGRTWKVYY-------SFFKLGGGWKKFATDNNLKVGDICVFELTKREPLSLKV 58
+L+ DG+ W+V+ S ++ G+ F TDNNL D CV+EL K++P+ L+V
Sbjct: 419 TKLQNSDGKQWEVFCVPNTVGSSSMRIVKGFSNFVTDNNLSHRDYCVYELIKKKPVVLEV 478
Query: 59 LIF 61
+F
Sbjct: 479 TMF 481
>Medtr5g070440.1 | B3 DNA-binding domain protein | LC |
chr5:29839401-29837623 | 20130731
Length = 274
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 6 IRLERLDGRTWKVY-------YSFFKLGGGWKKFATDNNLKVGDICVFELTKREPLSLKV 58
I+L+ G W+V+ S ++ G+ F DNNL GD CVFEL K +P+ LKV
Sbjct: 205 IKLQNSHGEQWEVFGIFHDARSSAIQITRGFSIFQKDNNLSYGDYCVFELIKTKPVVLKV 264
Query: 59 LIF 61
+F
Sbjct: 265 TMF 267
>Medtr1g098450.1 | B3 DNA-binding domain protein | LC |
chr1:44323895-44325486 | 20130731
Length = 318
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 24 KLGGGWKKFATDNNLKVGDICVFELTKREPLSLKVLIFPVAQGGVPSSLGPHF 76
+ GWK F TDN LK GD+CVF+L + L +V+IF + P + F
Sbjct: 248 RFCDGWKNFVTDNKLKQGDVCVFQLVEAPRLFFEVVIFRAREQSTPPHIQGTF 300