Miyakogusa Predicted Gene
- Lj0g3v0363529.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0363529.1 Non Characterized Hit- tr|I1JVW5|I1JVW5_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,36.18,1e-18,seg,NULL,NODE_105447_length_632_cov_7.200949.path1.1
(167 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr0268s0050.1 | hypothetical protein | LC | scaffold0268:1530... 62 3e-10
>Medtr0268s0050.1 | hypothetical protein | LC |
scaffold0268:15306-13703 | 20130731
Length = 268
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Query: 24 PESLILGRWTKHAKESVNVQY--QSKGWDPLQTCRYVSLLESCTQMCK--LACRTP---- 75
P S++L RWTK AK+ +N + S DP YV LE C +M L C P
Sbjct: 114 PGSVVLERWTKRAKDVINAENGNSSTHRDPAFVTTYVMFLERCKRMANAVLKCGNPNYIH 173
Query: 76 ----VVNNHTKKLEANXXXXXXXXXXXXXXXXXXRHVGNPAVVRTKGCGRGGS---KPNL 128
+V HT+ LE+ +GNP VR +G GS + N
Sbjct: 174 KTMEMVEQHTEILES--YNMGEVDEMFDRFPETGTRLGNPQRVRKRGGATAGSSTRRANA 231
Query: 129 GGRRRF-HCGICGGLGHNRKTCSMGNQ 154
+R CGICGG GHNR +C +Q
Sbjct: 232 EKKRSTPKCGICGGKGHNRVSCRFRHQ 258