Miyakogusa Predicted Gene

Lj0g3v0363379.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0363379.1 tr|G7IBH0|G7IBH0_MEDTR Tel2-interacting protein
OS=Medicago truncatula GN=MTR_1g038850 PE=4 SV=1,76.74,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL,CUFF.25041.1
         (846 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g038850.1 | ARM repeat protein | HC | chr1:14333229-143219...  1275   0.0  

>Medtr1g038850.1 | ARM repeat protein | HC | chr1:14333229-14321970
           | 20130731
          Length = 1340

 Score = 1275 bits (3300), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/847 (76%), Positives = 720/847 (85%), Gaps = 12/847 (1%)

Query: 5   MEKLSNSXXXXXLRSTTFQRLKSHSLQLLDLIRNPNNQNQ---KHFSLVVIPELLHFLHN 61
           ME+++       LRS TFQRLKSH+L LL L++NP NQN    KHFS+  IP+ LHFLHN
Sbjct: 1   MEEVAEGIETDELRSITFQRLKSHTLNLLQLLQNPQNQNNQNQKHFSITAIPQFLHFLHN 60

Query: 62  SSSSDLQPFFDYTLFPXXXXXDAAIQCRSSQKVDSQEMY----VPKTPFQVSDGIAEGVV 117
           SS   LQPFFDYTLFP     DAAIQCRS+ K DSQE Y    +PKTPF+VSD +AEG+V
Sbjct: 61  SSPESLQPFFDYTLFPLVLLLDAAIQCRSTHKFDSQENYNVSDIPKTPFKVSDSVAEGIV 120

Query: 118 HCLEELLSKCHLNSVDQMVVLLKKLTYGALLSPSEASEEFREGILLCFRALLLSLHSCCD 177
           HCLEELL KC LNSV+QMVV+LKKLTYGALLSPSEASEEFR GILLCF+ALLL+L+SC D
Sbjct: 121 HCLEELLKKCCLNSVNQMVVILKKLTYGALLSPSEASEEFRGGILLCFKALLLNLNSCSD 180

Query: 178 VSCSCKQITGLPALSDNIYNDRLHKTFNYGSESGECLLAFLRSEAASAAVGHWLSLLLKA 237
            SCSCKQI GLPALSDN+YN RLHK     SE  ECLLAFLRS+ ASAAVGHW+SLLLKA
Sbjct: 181 ASCSCKQIPGLPALSDNVYNHRLHKNLKNDSEPEECLLAFLRSQTASAAVGHWISLLLKA 240

Query: 238 ADTESARGQRGSSRLRIEAFKTLRVLVAKIGSADALAFFLPGIVSQLAKVLHAAKTMISG 297
           ADTE+ARGQRGS+R+RIEAF TLRVLVAK+GSADALAFFLPG+VS L+KVLH AKTM SG
Sbjct: 241 ADTEAARGQRGSARIRIEAFNTLRVLVAKVGSADALAFFLPGLVSNLSKVLHGAKTMTSG 300

Query: 298 AAGSMESIDQAIRGLAEFLMIVLQDDANASVLDTETSSNFDSNECKSSISLLEELRYLQD 357
           AAGSME+ID AIRGLAEFLMIVLQDDANASVLD E SS+ D NECKSS+SLLEELR+LQ 
Sbjct: 301 AAGSMEAIDLAIRGLAEFLMIVLQDDANASVLDMEVSSSSDPNECKSSLSLLEELRHLQV 360

Query: 358 KDCAKTKSFEDRSVESENISCSQNQLQGIGSTSPVKENKSLHVTRTKDWIQKTSAHVNKL 417
           KD  KTK  EDRS+ES+ ISCS+ QLQ +GST P  E  SLHVTRTKDWIQKTS+HVNKL
Sbjct: 361 KDSVKTKVVEDRSIESDKISCSETQLQEMGSTVPSGETLSLHVTRTKDWIQKTSSHVNKL 420

Query: 418 LSATFPQICIHSSQKVRKGLVEAIKGLLLECFYTLRESRQMLLECLCALAVDESDDVSST 477
           LSATFP ICIHSSQ+VRKGLV+A KGLLLECFYTL +SR MLLECL ALAVDESDDVSST
Sbjct: 421 LSATFPHICIHSSQRVRKGLVDATKGLLLECFYTLGDSRLMLLECLSALAVDESDDVSST 480

Query: 478 SQDFLECLFSQNRKTLIERDAADIFIRHLEKLPKVVLSNEESNAVLHAQQLLTIIFYSGP 537
           +QD LECLFSQ+ K+ IE DAA+IFIRHLEKLPKVVLSN+E  AVLHAQQLLTIIFYSGP
Sbjct: 481 AQDCLECLFSQSWKSRIEHDAAEIFIRHLEKLPKVVLSNDEPLAVLHAQQLLTIIFYSGP 540

Query: 538 RLLVDHLQSPVGAAKFLDVFATCLSHNSVFSGSLGKIT-SSRSSTLGYLPSIAELKSGAN 596
            LLVDHLQS +G AKFLDVFA CLSHNSVFSGSLGKIT +S+SST+GYLPSI ELKSG+N
Sbjct: 541 HLLVDHLQSHLGVAKFLDVFAACLSHNSVFSGSLGKITLASQSSTVGYLPSITELKSGSN 600

Query: 597 FFSYGLPLINSGSCEAPKCSLIEEKSTQGPFKSAHENKKLPRMPPWFSYVGSLKLYQPLS 656
           FFS GLPL+NSG CE PK  LI++K  Q P K+A +  +LPRMPPWFSYVGS KLYQPL+
Sbjct: 601 FFSRGLPLLNSGVCENPKSGLIDKKYVQEPVKAAQKKYELPRMPPWFSYVGSHKLYQPLA 660

Query: 657 WILRLLALSSVADHRSEGLLSHLTETLLGYFRKLVTDLRLKEYKKESWQSWYDRTGSGQL 716
            ILRL+ L  +AD R EGLLSHL ETLLGYFRKL+T+LRLKEY KESWQSWY RTGSGQL
Sbjct: 661 RILRLVGLCILADQRGEGLLSHLAETLLGYFRKLITELRLKEYNKESWQSWYSRTGSGQL 720

Query: 717 LRQASTAACMLNEIIFGLSDQAVSDFARKFHRSSISTRGQDQSDKLDCSLCESFWKMPKD 776
           LRQASTAACM+NEIIFGLSDQA++DFAR FHRSSIS     QS+KLDC++ ES WK+PK+
Sbjct: 721 LRQASTAACMINEIIFGLSDQAINDFARIFHRSSISKGVLVQSNKLDCAVHESLWKIPKE 780

Query: 777 KGVKSRLVDCIGEILHEYLSAEVWNVPVDRRVADLQLDFAVEDISLYFFQDSAMLHEERH 836
             VKS LVDCIG ILHEYLSAEVW+VPVDR+V+DLQL+ +VEDISLYFFQD+AMLHEER+
Sbjct: 781 ADVKSYLVDCIGGILHEYLSAEVWSVPVDRKVSDLQLNVSVEDISLYFFQDAAMLHEERY 840

Query: 837 FFHGCLF 843
               CLF
Sbjct: 841 ----CLF 843