Miyakogusa Predicted Gene

Lj0g3v0362149.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0362149.1 tr|G7L0Q1|G7L0Q1_MEDTR Protein GPR107 OS=Medicago
truncatula GN=MTR_7g100360 PE=4
SV=1,88.37,4e-37,Lung_7-TM_R,Transmembrane receptor, eukaryota; LUNG
SEVEN TRANSMEMBRANE RECEPTOR,NULL; LUNG SEVEN TR,CUFF.24950.1
         (96 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g100360.1 | lung seven transmembrane receptor family prote...   158   1e-39
Medtr1g067370.1 | lung seven transmembrane receptor family prote...   143   3e-35
Medtr3g080830.1 | lung seven transmembrane receptor family prote...   125   9e-30

>Medtr7g100360.1 | lung seven transmembrane receptor family protein
           | HC | chr7:40407236-40405176 | 20130731
          Length = 444

 Score =  158 bits (400), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 76/86 (88%), Positives = 83/86 (96%)

Query: 1   MAMLPVTKALNLICAAEDKHYIKVTGLPHGWDVLFYIFQFMRVILLFNVIVLIGTGWSFL 60
           MA+L + KALNLICAAEDKHY+KVTGLPHGWDVLFYIFQF+RV++LF VIVLIGTGWSFL
Sbjct: 215 MAVLLIMKALNLICAAEDKHYVKVTGLPHGWDVLFYIFQFIRVVVLFTVIVLIGTGWSFL 274

Query: 61  KPFLQDREKKVLIIVIPLQVLANLAS 86
           KPFLQDREKKVL+IVIPLQVLANLAS
Sbjct: 275 KPFLQDREKKVLMIVIPLQVLANLAS 300


>Medtr1g067370.1 | lung seven transmembrane receptor family protein
           | HC | chr1:29027853-29025870 | 20130731
          Length = 439

 Score =  143 bits (361), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 67/74 (90%), Positives = 72/74 (97%)

Query: 13  ICAAEDKHYIKVTGLPHGWDVLFYIFQFMRVILLFNVIVLIGTGWSFLKPFLQDREKKVL 72
           ICAAEDKHY+KVTG PHGWDVLFYIFQF+RV+LLF VIVLIGTGWSFLKPFLQ+REKKVL
Sbjct: 222 ICAAEDKHYVKVTGTPHGWDVLFYIFQFIRVVLLFTVIVLIGTGWSFLKPFLQEREKKVL 281

Query: 73  IIVIPLQVLANLAS 86
           +IVIPLQVLANLAS
Sbjct: 282 MIVIPLQVLANLAS 295


>Medtr3g080830.1 | lung seven transmembrane receptor family protein
           | HC | chr3:36583880-36581845 | 20130731
          Length = 437

 Score =  125 bits (314), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 57/79 (72%), Positives = 69/79 (87%)

Query: 8   KALNLICAAEDKHYIKVTGLPHGWDVLFYIFQFMRVILLFNVIVLIGTGWSFLKPFLQDR 67
           KA+NL+C AEDK YIK TG  HGWD+LFY+F F++ I LF +IVLIGTGWSFLKPFLQD+
Sbjct: 214 KAINLLCEAEDKSYIKRTGSAHGWDILFYMFSFLKGISLFTLIVLIGTGWSFLKPFLQDK 273

Query: 68  EKKVLIIVIPLQVLANLAS 86
           EKKVL+IVIPLQ++AN+A 
Sbjct: 274 EKKVLMIVIPLQIVANIAQ 292