Miyakogusa Predicted Gene

Lj0g3v0362119.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0362119.2 tr|A0YPH6|A0YPH6_LYNSP Peptidase M50 OS=Lyngbya
sp. (strain PCC 8106) GN=L8106_19201 PE=4 SV=1,37.28,2e-18,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.24986.2
         (271 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g082260.1 | M50 family peptidase | HC | chr5:35349840-3535...   358   4e-99
Medtr7g086430.2 | M50 family peptidase | HC | chr7:33553612-3354...    64   2e-10
Medtr7g086430.1 | M50 family peptidase | HC | chr7:33553663-3354...    63   4e-10

>Medtr5g082260.1 | M50 family peptidase | HC |
           chr5:35349840-35358220 | 20130731
          Length = 514

 Score =  358 bits (918), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 185/255 (72%), Positives = 201/255 (78%), Gaps = 12/255 (4%)

Query: 20  IPLSRCASCFQFDVRLXXXXXXXXXXXXXXXXXXALKQIRNP---RKRGIACSVTEPDGN 76
           +PLS C SCFQF++R                   +LK   NP   R+R IACSV E DG+
Sbjct: 14  VPLSHCTSCFQFNLRFHPSNRFHNSCSS------SLK--FNPPTVRRRRIACSVNESDGD 65

Query: 77  NDDEDKEAHKNGETQPLEGSFEQSTPPPVDAEQLNKFSDENKEQNDTQDVDSVEVASGSP 136
           ND+E KEAHKNGETQ LE + EQS PPPVDA QLNKF DEN  QND Q+ D++EV SGSP
Sbjct: 66  NDEE-KEAHKNGETQSLEDTSEQSNPPPVDAGQLNKFGDENTNQNDVQNTDNIEVTSGSP 124

Query: 137 LPGVKPQQLDEAIKIPKETIEILKNQVFGFDTFFVTSQDPYEAGVLFKGNLRGQPGKSYE 196
           LPGVKPQQLD+ IKIPKE IEILKNQVFGFDTFFVTSQDPYE GVLFKGNLRGQ  KSY+
Sbjct: 125 LPGVKPQQLDDVIKIPKEKIEILKNQVFGFDTFFVTSQDPYEGGVLFKGNLRGQASKSYD 184

Query: 197 KISKRLQDKFGDEYRLFLLVNPEDDKPVAVVVPRITLQPETAAVPEWLAAGAFGLVTVFT 256
           KISKRLQDKFGDEYRLFLLVNPEDDKPVAVVVPR TLQPET  VPEW  A +FG+VTVFT
Sbjct: 185 KISKRLQDKFGDEYRLFLLVNPEDDKPVAVVVPRTTLQPETTPVPEWFGAASFGIVTVFT 244

Query: 257 LLLRNVPALQSNLLS 271
           LLLRNVP LQS+LLS
Sbjct: 245 LLLRNVPNLQSDLLS 259


>Medtr7g086430.2 | M50 family peptidase | HC |
           chr7:33553612-33549828 | 20130731
          Length = 419

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 65/118 (55%), Gaps = 11/118 (9%)

Query: 150 KIPKETIEILKNQVFGFDTFFVTSQDPYEA---GVLFKGNLRGQPGKSYEKISKRLQDKF 206
           K+    ++ +K+++FG+ TF+VT ++P+     G+LF GNLRG+    +  +  RL +  
Sbjct: 132 KVDPADVKKIKDKLFGYSTFWVTKEEPFGELGEGILFIGNLRGKREDIFSILQNRLVEAT 191

Query: 207 GDEYRLFLLVNPEDDKPVAVVVPRITL--------QPETAAVPEWLAAGAFGLVTVFT 256
           GD+Y LF++  P+ D P     PR++         +PE   + +++ A    L+T+ T
Sbjct: 192 GDKYNLFMVEEPDSDSPDPRGGPRVSFGLLRKEVSEPEETTLWQYVVASLLFLLTIGT 249


>Medtr7g086430.1 | M50 family peptidase | HC |
           chr7:33553663-33548233 | 20130731
          Length = 542

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 65/118 (55%), Gaps = 11/118 (9%)

Query: 150 KIPKETIEILKNQVFGFDTFFVTSQDPYEA---GVLFKGNLRGQPGKSYEKISKRLQDKF 206
           K+    ++ +K+++FG+ TF+VT ++P+     G+LF GNLRG+    +  +  RL +  
Sbjct: 132 KVDPADVKKIKDKLFGYSTFWVTKEEPFGELGEGILFIGNLRGKREDIFSILQNRLVEAT 191

Query: 207 GDEYRLFLLVNPEDDKPVAVVVPRITL--------QPETAAVPEWLAAGAFGLVTVFT 256
           GD+Y LF++  P+ D P     PR++         +PE   + +++ A    L+T+ T
Sbjct: 192 GDKYNLFMVEEPDSDSPDPRGGPRVSFGLLRKEVSEPEETTLWQYVVASLLFLLTIGT 249