Miyakogusa Predicted Gene

Lj0g3v0362029.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0362029.1 Non Characterized Hit- tr|G7II32|G7II32_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,32.84,7e-17,seg,NULL,CUFF.24939.1
         (221 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g086915.1 | hypothetical protein | HC | chr6:32825512-3282...   176   1e-44
Medtr8g103530.1 | hypothetical protein | HC | chr8:43565104-4356...   166   2e-41
Medtr0147s0050.1 | ATP-dependent RNA helicase DDX11-like protein...   101   6e-22
Medtr2g101980.1 | hypothetical protein | HC | chr2:43878618-4387...    87   9e-18
Medtr0147s0020.1 | hypothetical protein | LC | scaffold0147:7730...    68   7e-12

>Medtr6g086915.1 | hypothetical protein | HC |
           chr6:32825512-32824552 | 20130731
          Length = 173

 Score =  176 bits (446), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/201 (50%), Positives = 129/201 (64%), Gaps = 36/201 (17%)

Query: 1   MLLRSSITSTKKFFQKTVKNFKSLFSTGYQKLPKSPS---HTPCSVSAMNAMDMNSNTSY 57
           MLLRSSIT+TKKFF+ T+KNFKSLFS+ YQKLPKS S   H   S++A + +DMN N + 
Sbjct: 1   MLLRSSITTTKKFFKNTLKNFKSLFSSDYQKLPKSDSPHNHLSYSLAANHVLDMNINNTS 60

Query: 58  HDMEKLYSDFSDQXXXXXXXXXXXXXXXAAALPSPTQQENKVYNGSKKMQEGKTEEFAKK 117
               KL                        +  SP++++N            K E F  K
Sbjct: 61  GSYMKL------------------------SNASPSEKKN---------WANKREVFDNK 87

Query: 118 NNKRSLTLQSTKQKDSSFNSMGMKEHRYFMVRQKLRELEMLDMSNEDHLMDIEEVLHYYS 177
           NN++ LT+Q  KQKDSSF S  MKE +Y MV++KL+ELEMLD+SN D+ MDIEEVL+YYS
Sbjct: 88  NNEKKLTIQRGKQKDSSFTSKDMKERKYCMVKEKLKELEMLDISNVDYAMDIEEVLYYYS 147

Query: 178 LLTCPVYLDIVDRFFLEMYSE 198
            LTCP Y++IVDRFF+EMYS+
Sbjct: 148 RLTCPAYVEIVDRFFMEMYSD 168


>Medtr8g103530.1 | hypothetical protein | HC |
           chr8:43565104-43566115 | 20130731
          Length = 203

 Score =  166 bits (420), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/223 (45%), Positives = 135/223 (60%), Gaps = 28/223 (12%)

Query: 1   MLLRSSITSTKKFFQKTVKNFKSLFSTGYQKLPKSPSHTPCSVSAMNAMDMNSNTSYHDM 60
           MLLR+SI+  KKFFQ T+ NF+SLFS  YQK+PK+P H              +++SY+D+
Sbjct: 1   MLLRTSISKYKKFFQNTLNNFRSLFSRSYQKIPKTPPH--------------NHSSYNDL 46

Query: 61  EKLYSDFSDQXXXXXXXXXXXXXXXAAALPSPTQQENK--VYNGSKKMQE-GKTEEFAKK 117
           EK YSDF+++               A    S T+QE +  V+N ++ M      +E  + 
Sbjct: 47  EKFYSDFTEKWDSEKGKSKKRRKNKAMLSSSTTKQEEELHVHNHNENMVALNNAKEKNEM 106

Query: 118 NNKRSLTLQSTKQKDSS-FNSMGMKEHRYFMVRQKLRELEMLDMSNEDHLMDIEEVLHYY 176
                L  +  KQ  SS FNS  M       V +KL+ELEML+MSN D+++DIEEVLHYY
Sbjct: 107 EKSEELDGEQCKQDSSSMFNSKSM-------VEKKLKELEMLEMSNVDYILDIEEVLHYY 159

Query: 177 SLLTCPVYLDIVDRFFLEMYSELSGPVLWPDTPRSVNSRLKLR 219
           S LTCP YL+IVD+FF+EMYSE  G    P+TP SVNS+LK+R
Sbjct: 160 SRLTCPSYLEIVDKFFVEMYSEFFG---CPETPASVNSKLKMR 199


>Medtr0147s0050.1 | ATP-dependent RNA helicase DDX11-like protein,
           putative | HC | scaffold0147:13680-13063 | 20130731
          Length = 205

 Score =  101 bits (251), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 102/200 (51%), Gaps = 19/200 (9%)

Query: 3   LRSSITSTKKFFQKTVKNFKSLFSTGYQKLPKSPSHTPCSVSAMNAMDMNSNTSYHDMEK 62
           LR +I  TK FF K +KNF+S FS GYQKLP+S      S + +  MD   N   +  ++
Sbjct: 4   LRKTIHKTKSFFNKRLKNFRSFFSGGYQKLPRS-----LSFNFLCNMD---NAKAYSSDQ 55

Query: 63  LYSDFSDQXXXXXXXXXXXXXXXAAALPSPTQQENKVYNGSKKMQEGKTEEFAKKNNKRS 122
            Y++F D                  A+    +  N V    +  Q+   E          
Sbjct: 56  FYNEFYDILQSDLSTMKMFGKGKEPAMEDAARSGNFVCFSKRSPQKSAYEG--------- 106

Query: 123 LTLQSTKQKDSSFNSMGMKEHRYFMVRQKLRELEMLDMSNEDHLMDIEEVLHYYSLLTCP 182
            ++QS  +K    NS    +  + +  QK+++++M++  + +H++DIEE LHYYS L  P
Sbjct: 107 -SVQSQLRKKEDLNSQNTNKGAHVLA-QKMKKMDMMESGDLEHVLDIEEALHYYSRLKSP 164

Query: 183 VYLDIVDRFFLEMYSELSGP 202
           VYLDIVDRFF+++ S+ + P
Sbjct: 165 VYLDIVDRFFIDINSDFTFP 184


>Medtr2g101980.1 | hypothetical protein | HC |
           chr2:43878618-43879420 | 20130731
          Length = 203

 Score = 87.4 bits (215), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 98/205 (47%), Gaps = 29/205 (14%)

Query: 1   MLLRSSITSTKKFFQKTVKNFKSLFSTGYQKLPKSPSHTPCSVSAMNAMDMNSNTSYHDM 60
           MLLR +I  T+   +KT+KNFK     GYQKLP+S S  P           NS  +Y   
Sbjct: 1   MLLRKTICKTRFLLKKTLKNFKCFIFGGYQKLPRSLSFNP-----FLGRSSNSARTYTS- 54

Query: 61  EKLYSDFSDQXXXXXXXXXXXXXXXAAALPSPTQQENKVYNGSKKMQEGKTEEFAKKNNK 120
           ++ Y++F D                   L S   + N+    S  +   KT E A    K
Sbjct: 55  DQFYNEFYD------------------ILQSDLNRINRNGEISMNVSREKTMEDAASIEK 96

Query: 121 RSLTL--QSTKQKDSSFNSMGMKEHRYFMVRQ---KLRELEMLDMSNEDHLMDIEEVLHY 175
           + ++   Q + +           +     V +   K++ELEM D  + + ++DIEE LHY
Sbjct: 97  KHVSFVKQISPENGVKEKKDKGNKKNDSCVNELALKMKELEMNDSGDVEQVLDIEEALHY 156

Query: 176 YSLLTCPVYLDIVDRFFLEMYSELS 200
           YS L  P+YLDIVD+FF +M+SELS
Sbjct: 157 YSRLKSPIYLDIVDKFFTDMHSELS 181


>Medtr0147s0020.1 | hypothetical protein | LC |
           scaffold0147:7730-6502 | 20130731
          Length = 147

 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 45/56 (80%)

Query: 147 MVRQKLRELEMLDMSNEDHLMDIEEVLHYYSLLTCPVYLDIVDRFFLEMYSELSGP 202
           ++ QK++EL+M+D  + +H++DIEE LHYYS L  PVYLDIV+RFF+++ S+ + P
Sbjct: 7   VLAQKMKELDMMDSGDLEHVLDIEEALHYYSRLKSPVYLDIVNRFFIDINSDFTLP 62