Miyakogusa Predicted Gene

Lj0g3v0361469.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0361469.2 Non Characterized Hit- tr|I1N1E4|I1N1E4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.85,8e-17,no
description,NULL; P-loop containing nucleoside triphosphate
hydrolases,NULL; AAA_17,NULL; SHIKIMT,CUFF.24900.2
         (53 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g063470.1 | thermosensitive gluconokinase, putative | HC |...    90   5e-19
Medtr8g063470.2 | thermosensitive gluconokinase, putative | HC |...    81   2e-16

>Medtr8g063470.1 | thermosensitive gluconokinase, putative | HC |
          chr8:26595838-26597376 | 20130731
          Length = 189

 Score = 89.7 bits (221), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%), Gaps = 2/55 (3%)

Query: 1  MASSNG--AVIVIMGVSGAGKTTIGRRLEKETGYKFLDADDFHSQSNKEKMRIGI 53
          MAS+N    ++VIMGVSGAGKTTIG++LEKE  YKFLDADDFHSQSNKEKMR+GI
Sbjct: 1  MASNNNGPVIVVIMGVSGAGKTTIGQKLEKEIKYKFLDADDFHSQSNKEKMRMGI 55


>Medtr8g063470.2 | thermosensitive gluconokinase, putative | HC |
          chr8:26595960-26597376 | 20130731
          Length = 176

 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 37/42 (88%), Positives = 40/42 (95%)

Query: 12 MGVSGAGKTTIGRRLEKETGYKFLDADDFHSQSNKEKMRIGI 53
          MGVSGAGKTTIG++LEKE  YKFLDADDFHSQSNKEKMR+GI
Sbjct: 1  MGVSGAGKTTIGQKLEKEIKYKFLDADDFHSQSNKEKMRMGI 42