Miyakogusa Predicted Gene
- Lj0g3v0361339.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0361339.1 Non Characterized Hit- tr|A5AP91|A5AP91_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,51.18,5e-16,domain in helicases and associated with SANT,HAS
subgroup; seg,NULL; SNF2 FAMILY CHROMODOMAIN-HELICA,CUFF.24920.1
(316 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g053955.1 | helicase | HC | chr1:22924323-22942659 | 20130731 439 e-123
Medtr7g056603.7 | helicase/SANT-associated, DNA-binding protein,... 63 4e-10
Medtr7g056603.6 | helicase/SANT-associated, DNA-binding protein,... 63 4e-10
Medtr7g056603.5 | helicase/SANT-associated, DNA-binding protein,... 63 4e-10
Medtr7g056603.4 | helicase/SANT-associated, DNA-binding protein,... 63 4e-10
Medtr7g056603.2 | helicase/SANT-associated, DNA-binding protein,... 63 4e-10
Medtr7g056603.1 | helicase/SANT-associated, DNA-binding protein,... 63 4e-10
Medtr7g056603.3 | helicase/SANT-associated, DNA-binding protein,... 63 4e-10
Medtr7g056603.8 | helicase/SANT-associated, DNA-binding protein,... 62 5e-10
>Medtr1g053955.1 | helicase | HC | chr1:22924323-22942659 | 20130731
Length = 2044
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/345 (70%), Positives = 261/345 (75%), Gaps = 32/345 (9%)
Query: 1 MASKGPRFKFDHETKAKRQKTLEAPKEPRRPKTHWDHVLEEMVWLSKDFESERKWKLAHA 60
MASKGPR K D E K KR K +EA +EPRRPKTHWDHVLEEMVWLSKDFESERKWKLA A
Sbjct: 1 MASKGPRSKIDPEYKVKRHKAVEASREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA 60
Query: 61 KKVALKCSK-GFLDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMVL 119
KKVALK SK G LD A RGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQM L
Sbjct: 61 KKVALKASKEGMLDPAARGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMEL 120
Query: 120 DEKKKKALDKQLEFLLGQTERYSTMLAENLVDSTSADKPAEKNSAEH------------- 166
DEKKKKALDKQLEFLLGQTERYSTMLAENLVD A+ PAEKNSAEH
Sbjct: 121 DEKKKKALDKQLEFLLGQTERYSTMLAENLVD---ANAPAEKNSAEHQMSFQCKDIGGDI 177
Query: 167 -------HIDYQSDAPDHDEEYGVQSXXXXXXXXXXXXXXXALITKEERQEELTALHDEM 219
+++Y+SDAPDHDEEY VQS ALITKEERQEEL ALH EM
Sbjct: 178 INEPKEANVEYKSDAPDHDEEYDVQSDDVSDDDEQTLEEDEALITKEERQEELAALHSEM 237
Query: 220 NLPIEELLKRYAGEKGELERPQISQEHSEDGAKIARTGDAD-------ENGDLSPVSKIG 272
+LPIEELLKRYAG+KGEL R + S E SEDG +I RTGD D ENGD +S+I
Sbjct: 238 DLPIEELLKRYAGDKGELARQESSPESSEDGGQIVRTGDPDGQEELASENGDHISISEIC 297
Query: 273 TNDSSVVPGRRCDESNGDIATSTNNLSEYKDRQSENLKE-PSDTA 316
TNDSS V GRRCD+SNGD+AT TNNLS+ + QSENLKE PS+ A
Sbjct: 298 TNDSSTVLGRRCDDSNGDVATPTNNLSQNEVHQSENLKEVPSEAA 342
>Medtr7g056603.7 | helicase/SANT-associated, DNA-binding protein,
putative | HC | chr7:20202990-20190550 | 20130731
Length = 1901
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 32 KTHWDHVLEEMVWLSKDFESERKWKLAHAKKVALKCSKGFLDQATRGEKKMKEEEQRLRK 91
K+HWD VLEEM WL+ DF ER WK A ++ C + L R EK+ K E ++
Sbjct: 512 KSHWDFVLEEMAWLANDFAQERLWKTTAAAQL---CHQASLTSRLRFEKQNKNLEMKI-- 566
Query: 92 VALNISKDVKKFWTKIEKLV 111
++ ++K V +FW +E L+
Sbjct: 567 LSHTMAKAVMQFWHSVELLL 586
>Medtr7g056603.6 | helicase/SANT-associated, DNA-binding protein,
putative | HC | chr7:20202990-20190550 | 20130731
Length = 1918
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 32 KTHWDHVLEEMVWLSKDFESERKWKLAHAKKVALKCSKGFLDQATRGEKKMKEEEQRLRK 91
K+HWD VLEEM WL+ DF ER WK A ++ C + L R EK+ K E ++
Sbjct: 512 KSHWDFVLEEMAWLANDFAQERLWKTTAAAQL---CHQASLTSRLRFEKQNKNLEMKI-- 566
Query: 92 VALNISKDVKKFWTKIEKLV 111
++ ++K V +FW +E L+
Sbjct: 567 LSHTMAKAVMQFWHSVELLL 586
>Medtr7g056603.5 | helicase/SANT-associated, DNA-binding protein,
putative | HC | chr7:20202847-20190550 | 20130731
Length = 1899
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 32 KTHWDHVLEEMVWLSKDFESERKWKLAHAKKVALKCSKGFLDQATRGEKKMKEEEQRLRK 91
K+HWD VLEEM WL+ DF ER WK A ++ C + L R EK+ K E ++
Sbjct: 512 KSHWDFVLEEMAWLANDFAQERLWKTTAAAQL---CHQASLTSRLRFEKQNKNLEMKI-- 566
Query: 92 VALNISKDVKKFWTKIEKLV 111
++ ++K V +FW +E L+
Sbjct: 567 LSHTMAKAVMQFWHSVELLL 586
>Medtr7g056603.4 | helicase/SANT-associated, DNA-binding protein,
putative | HC | chr7:20205243-20190550 | 20130731
Length = 1974
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 32 KTHWDHVLEEMVWLSKDFESERKWKLAHAKKVALKCSKGFLDQATRGEKKMKEEEQRLRK 91
K+HWD VLEEM WL+ DF ER WK A ++ C + L R EK+ K E ++
Sbjct: 568 KSHWDFVLEEMAWLANDFAQERLWKTTAAAQL---CHQASLTSRLRFEKQNKNLEMKI-- 622
Query: 92 VALNISKDVKKFWTKIEKLV 111
++ ++K V +FW +E L+
Sbjct: 623 LSHTMAKAVMQFWHSVELLL 642
>Medtr7g056603.2 | helicase/SANT-associated, DNA-binding protein,
putative | HC | chr7:20205243-20190550 | 20130731
Length = 1976
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 32 KTHWDHVLEEMVWLSKDFESERKWKLAHAKKVALKCSKGFLDQATRGEKKMKEEEQRLRK 91
K+HWD VLEEM WL+ DF ER WK A ++ C + L R EK+ K E ++
Sbjct: 587 KSHWDFVLEEMAWLANDFAQERLWKTTAAAQL---CHQASLTSRLRFEKQNKNLEMKI-- 641
Query: 92 VALNISKDVKKFWTKIEKLV 111
++ ++K V +FW +E L+
Sbjct: 642 LSHTMAKAVMQFWHSVELLL 661
>Medtr7g056603.1 | helicase/SANT-associated, DNA-binding protein,
putative | HC | chr7:20205243-20190514 | 20130731
Length = 1993
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 32 KTHWDHVLEEMVWLSKDFESERKWKLAHAKKVALKCSKGFLDQATRGEKKMKEEEQRLRK 91
K+HWD VLEEM WL+ DF ER WK A ++ C + L R EK+ K E ++
Sbjct: 587 KSHWDFVLEEMAWLANDFAQERLWKTTAAAQL---CHQASLTSRLRFEKQNKNLEMKI-- 641
Query: 92 VALNISKDVKKFWTKIEKLV 111
++ ++K V +FW +E L+
Sbjct: 642 LSHTMAKAVMQFWHSVELLL 661
>Medtr7g056603.3 | helicase/SANT-associated, DNA-binding protein,
putative | HC | chr7:20205243-20190514 | 20130731
Length = 1974
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 32 KTHWDHVLEEMVWLSKDFESERKWKLAHAKKVALKCSKGFLDQATRGEKKMKEEEQRLRK 91
K+HWD VLEEM WL+ DF ER WK A ++ C + L R EK+ K E ++
Sbjct: 587 KSHWDFVLEEMAWLANDFAQERLWKTTAAAQL---CHQASLTSRLRFEKQNKNLEMKI-- 641
Query: 92 VALNISKDVKKFWTKIEKLV 111
++ ++K V +FW +E L+
Sbjct: 642 LSHTMAKAVMQFWHSVELLL 661
>Medtr7g056603.8 | helicase/SANT-associated, DNA-binding protein,
putative | HC | chr7:20205243-20190472 | 20130731
Length = 1378
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 16 AKRQKTLEAPK----EPRRPKTHWDHVLEEMVWLSKDFESERKWKLAHAKKVALKCSKGF 71
KR++ LE P K+HWD VLEEM WL+ DF ER WK A ++ C +
Sbjct: 567 VKRKRILELSAHTLPSPILRKSHWDFVLEEMAWLANDFAQERLWKTTAAAQL---CHQAS 623
Query: 72 LDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLV 111
L R EK+ K E ++ ++ ++K V +FW +E L+
Sbjct: 624 LTSRLRFEKQNKNLEMKI--LSHTMAKAVMQFWHSVELLL 661