Miyakogusa Predicted Gene

Lj0g3v0361229.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0361229.2 Non Characterized Hit- tr|I1LAD8|I1LAD8_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,50,0.000000008,seg,NULL,CUFF.24881.2
         (119 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g070080.1 | F-box protein interaction domain protein | LC ...    50   5e-07
Medtr8g433030.1 | F-box protein interaction domain protein | LC ...    47   4e-06
Medtr8g032390.1 | F-box protein interaction domain protein | LC ...    47   5e-06
Medtr4g118360.1 | galactose oxidase | LC | chr4:49038681-4903830...    47   5e-06
Medtr1g055175.1 | F-box protein interaction domain protein | LC ...    47   5e-06
Medtr1g055165.1 | F-box protein interaction domain protein | LC ...    46   9e-06

>Medtr5g070080.1 | F-box protein interaction domain protein | LC |
           chr5:29687571-29689028 | 20130731
          Length = 386

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 6/91 (6%)

Query: 1   MKEYKGQSSWTKSFVISV-YAPMH-FLPIWSTQXXXXXXXXXXXXXXXQKFDEGELLEKH 58
           MK+Y  QSSWTK+ V+S    P+H F P + T+                  D+G+LLE H
Sbjct: 300 MKKYNVQSSWTKTLVLSFGDIPIHYFCPKYCTKSGDIVGTDDNVLAKYN--DKGQLLEHH 357

Query: 59  AYGIEDKFALKYFDMYRENLLTLPGGDFEEG 89
           +Y   +  +L    MY E+LL+LPGGD ++ 
Sbjct: 358 SYSDHEYGSLVV--MYTESLLSLPGGDSDQA 386


>Medtr8g433030.1 | F-box protein interaction domain protein | LC |
           chr8:12439195-12440375 | 20130731
          Length = 339

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 7/86 (8%)

Query: 1   MKEYKGQSSWTKSFVISVYAPMH-FLPIWSTQXXXXXXXXXXXXXXXQKFDEGELLEKHA 59
           MKEYK QSSWTK+ VI +   +  F P++ST+               +  ++G+LLE  A
Sbjct: 258 MKEYKQQSSWTKTLVIPIDNDIPWFSPVYSTKSGDIIGTSNIGLGLVKYNNKGQLLEYFA 317

Query: 60  YG-IEDKFALKYFDMYRENLLTLPGG 84
              I  + A     MY E+LL+LPGG
Sbjct: 318 MNSIASEVA-----MYTESLLSLPGG 338


>Medtr8g032390.1 | F-box protein interaction domain protein | LC |
           chr8:12194767-12195947 | 20130731
          Length = 372

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 7/86 (8%)

Query: 1   MKEYKGQSSWTKSFVISVYAPMH-FLPIWSTQXXXXXXXXXXXXXXXQKFDEGELLEKHA 59
           MKEYK QSSWTK+ VI +   +  F P++ST+               +  ++G+LLE  A
Sbjct: 291 MKEYKQQSSWTKTLVIPIDNDIPWFSPVYSTKSGDIIGTSNIGLGLVKYNNKGQLLEYFA 350

Query: 60  YG-IEDKFALKYFDMYRENLLTLPGG 84
              I  + A     MY E+LL+LPGG
Sbjct: 351 MNSIASEVA-----MYTESLLSLPGG 371


>Medtr4g118360.1 | galactose oxidase | LC | chr4:49038681-49038301 |
           20130731
          Length = 126

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 1   MKEYKGQSSWTKSFVISVYAPMHFLPIWSTQXXXXXXXXXXXXXXXQKFDEGELLEKHAY 60
           MKEYK  SSWTK+ V+S+    +F PI  T+                  D+G L E+H +
Sbjct: 40  MKEYKVHSSWTKTLVLSISGIPYFSPICCTKSGHIIGTDGYNRLMKYD-DKGRLFERHTH 98

Query: 61  GIEDKFALKYFDMYRENLLTLP 82
             +  +      MY E+LL+LP
Sbjct: 99  FKDKNYHRSRVAMYTESLLSLP 120


>Medtr1g055175.1 | F-box protein interaction domain protein | LC |
           chr1:24352771-24353770 | 20130731
          Length = 201

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 1   MKEYKGQSSWTKSFVISVYAPMHFLPIWSTQXXXXXXXXXXXXXXXQKFDEGELLEKHAY 60
           MKEYK QSSWTK+ V++ Y  +H + +                   +  +EGE LE H Y
Sbjct: 115 MKEYKVQSSWTKTLVLTTYDTIHNVSLVCCTTSGDIVGTDSRTGLVRYDEEGEFLE-HTY 173

Query: 61  GIEDKFALKYFDMYRENLLTLPGGDFE 87
             +D        MY E+LL+LP  + E
Sbjct: 174 YCKDSRNGFRLAMYTESLLSLPSDNEE 200


>Medtr1g055165.1 | F-box protein interaction domain protein | LC |
           chr1:24339939-24341078 | 20130731
          Length = 318

 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 1   MKEYKGQSSWTKSFVISVYAPMHFLPIWSTQXXXXXXXXXXXXXXXQKFDEGELLEKHAY 60
           MKEYK QSSWTK+ V++ Y  +H + +                   +  +EGE LE H Y
Sbjct: 232 MKEYKVQSSWTKTLVLTTYDTIHNVSLVCCTTSGDIVGTDSRTGLVRYDEEGEFLE-HTY 290

Query: 61  GIEDKFALKYFDMYRENLLTLPGGDFE 87
             +D        MY E+LL+LP  + E
Sbjct: 291 YCKDSRNGFRLAMYTESLLSLPSDNEE 317