Miyakogusa Predicted Gene

Lj0g3v0360179.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0360179.1 Non Characterized Hit- tr|I1LKD2|I1LKD2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23913
PE,52.27,3e-16,seg,NULL,CUFF.24917.1
         (150 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g060790.1 | defects in morphology protein 1 precursor | HC...    57   6e-09

>Medtr4g060790.1 | defects in morphology protein 1 precursor | HC |
           chr4:22365929-22370030 | 20130731
          Length = 407

 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 64/133 (48%), Gaps = 15/133 (11%)

Query: 1   MAETSS-DHTPHIPIEIITDDEMALIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 59
           MAETSS ++  +IPIEI++++EMA IE                                 
Sbjct: 1   MAETSSSNNVNNIPIEIVSEEEMAFIEAAYASVSSSSSSSILSRCSSSSSPTRLLHNNAI 60

Query: 60  XXXXXXXXXIKSITVLSKRSFSHATGSGTSTHHPDIED----SSPKLKTLLPDSFLHRFR 115
                    I SIT++SKR  S ++ S +     DIED    SS + K  + DSFL RFR
Sbjct: 61  S--------INSITLVSKRRLSSSSSSSSCAG--DIEDTVVNSSSQKKPNISDSFLRRFR 110

Query: 116 KNRGLSVTDITST 128
           K R LSVTD+TST
Sbjct: 111 KKRALSVTDLTST 123