Miyakogusa Predicted Gene

Lj0g3v0360079.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0360079.1 Non Characterized Hit- tr|J3NDK3|J3NDK3_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB12G2,44.83,2e-17,
,CUFF.24793.1
         (326 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g086170.1 | hypothetical protein | HC | chr4:33727764-3372...   444   e-125
Medtr6g005540.1 | hypothetical protein | HC | chr6:814748-809962...   441   e-124
Medtr4g055190.1 | hypothetical protein | HC | chr4:20072654-2007...   343   1e-94
Medtr4g055205.1 | transmembrane protein, putative | HC | chr4:20...   121   9e-28

>Medtr4g086170.1 | hypothetical protein | HC |
           chr4:33727764-33722972 | 20130731
          Length = 326

 Score =  444 bits (1142), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 223/332 (67%), Positives = 252/332 (75%), Gaps = 12/332 (3%)

Query: 1   MAGVAILLDLWRKNQNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALFGSSVAHC 60
           MAG+AIL+DLWRKN N                                 RA FG  VA+C
Sbjct: 1   MAGIAILVDLWRKNHNSAFQSSASSSAAVAAAASFAAGTTFAS------RAFFGIPVAYC 54

Query: 61  DAGAALSEDYISSIQSASERIFNYDSLRHSTKQYNVELKPLFSAFELRAFAMTSIRSFLM 120
           DAGA +SED IS+IQSASERI+NYD+ R STK YNV+ KPLFSAFELR+ AMTSIRSFLM
Sbjct: 55  DAGATVSEDLISTIQSASERIYNYDAERFSTKTYNVQPKPLFSAFELRSLAMTSIRSFLM 114

Query: 121 FYLPLLEPRAEMEDDEDFLEDNQ-DHHVDLVVPLKKSVKQIIRETSVVTTRRILERIAVH 179
            YLPLLEPRAE+ED +D  E+ Q +H VDLVVP KKSVKQIIRETSVVTTRRILERIAVH
Sbjct: 115 HYLPLLEPRAEIEDLDDLFEEEQPEHRVDLVVPFKKSVKQIIRETSVVTTRRILERIAVH 174

Query: 180 YVSQRMAWKLLKDVPRSATRKAARKMPTLVYFFSVSRTTFRGHMLGVAASWLIQVGVDLY 239
           YVS+RMAWKLLKDVPRSATRKAAR MP+ VYFFSV RTTFRGHMLGVAASW++QVG++LY
Sbjct: 175 YVSERMAWKLLKDVPRSATRKAARNMPSYVYFFSVGRTTFRGHMLGVAASWVVQVGMELY 234

Query: 240 RFIKPMFKSKDEDID-----GDKTKQVGPLAPKIVIATIRCTSSLIFASIGAGIGATIVR 294
           RF + +F + DED +      D TKQV  L  K+ + +IRC SSL+FASIGAGIGAT+VR
Sbjct: 235 RFFRSIFNANDEDSNVDTTKQDTTKQVQLLGQKVALTSIRCGSSLVFASIGAGIGATLVR 294

Query: 295 PSLGQWIGCAVGDLTGPIIVACCLDQVFQVKL 326
           PSLGQWIGCA GDL GPIIVA C D+ FQV L
Sbjct: 295 PSLGQWIGCAAGDLVGPIIVAFCADKAFQVAL 326


>Medtr6g005540.1 | hypothetical protein | HC | chr6:814748-809962 |
           20130731
          Length = 346

 Score =  441 bits (1134), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/346 (64%), Positives = 251/346 (72%), Gaps = 20/346 (5%)

Query: 1   MAGVAILLDLWRKNQNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALFGSSVAHC 60
           MAG+AIL+DLWRKN N                                 RA F   VA+C
Sbjct: 1   MAGIAILVDLWRKNHNSAFQSSSAFSSSSSAAVAAAAAASFAAGTTFASRAFFRIPVAYC 60

Query: 61  DAGAALSED-----------YISSIQSASERIFNYDSLRHSTKQYNVELKPLFSAFELRA 109
           DAGA +SED           +IS+IQSASERI NYD+ R STK YNV+ KPLFSAFELR+
Sbjct: 61  DAGATVSEDLISTIQSASEDFISTIQSASERINNYDAERFSTKTYNVQPKPLFSAFELRS 120

Query: 110 FAMTSIRSFLMFYLPLLEPRAEMEDDED----FLEDNQDHHVDLVVPLKKSVKQIIRETS 165
            AMTSIRSFLM YLPLLEPRAEMEDDED      E+  +H VDLVVP KKSVKQIIRETS
Sbjct: 121 LAMTSIRSFLMHYLPLLEPRAEMEDDEDTFESLTEEQPEHRVDLVVPFKKSVKQIIRETS 180

Query: 166 VVTTRRILERIAVHYVSQRMAWKLLKDVPRSATRKAARKMPTLVYFFSVSRTTFRGHMLG 225
           VVTTRR LERIAVHYVS+RMAWKLLKDVPRSATRKAAR MPT VYFFSV RTTFRGHMLG
Sbjct: 181 VVTTRRFLERIAVHYVSERMAWKLLKDVPRSATRKAARNMPTYVYFFSVGRTTFRGHMLG 240

Query: 226 VAASWLIQVGVDLYRFIKPMFKSKDEDID-----GDKTKQVGPLAPKIVIATIRCTSSLI 280
           VAASW++QVG++LYRF + +F + DED +      D TKQV  L  K+ + +IRC+SSL+
Sbjct: 241 VAASWVVQVGMELYRFFRSIFSANDEDSNVDTTKQDTTKQVQLLGQKVALTSIRCSSSLV 300

Query: 281 FASIGAGIGATIVRPSLGQWIGCAVGDLTGPIIVACCLDQVFQVKL 326
           FASIGAGIGAT+VRPSLGQWIGCA GDL GPIIVA C D+ FQV L
Sbjct: 301 FASIGAGIGATLVRPSLGQWIGCAAGDLAGPIIVAFCADKAFQVAL 346


>Medtr4g055190.1 | hypothetical protein | HC |
           chr4:20072654-20075166 | 20130731
          Length = 324

 Score =  343 bits (880), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 167/328 (50%), Positives = 223/328 (67%), Gaps = 6/328 (1%)

Query: 1   MAGVAILLDLWRKNQNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALFGSSVAHC 60
           M G+ +L+DLWRKNQ                                     FG+ VA+C
Sbjct: 1   MVGITLLVDLWRKNQQ--SFNKAYTNPSSWLFSTSATAASISAGASFASNDFFGTPVAYC 58

Query: 61  DAGAALSEDYISSIQSASERIFNYDSLRHSTKQYNVELKPLFSAFELRAFAMTSIRSFLM 120
           DAG A +++++  I+++  + F +DSL++  K YN ELKPL+SAFELR+F + S+RSFLM
Sbjct: 59  DAGVATADEHLPGIRTSPGKYFYHDSLKYGVKTYNFELKPLWSAFELRSFGLISLRSFLM 118

Query: 121 FYLPLLEPRAEMEDDED--FLEDNQDHHVDLVVPLKKSVKQIIRETSVVTTRRILERIAV 178
           FYLPLLEP A+ME D    FL+++ +    L VP KKSV QI+RE +VVTTRRILERI  
Sbjct: 119 FYLPLLEPHAKMEQDHHDLFLDNHDELRSKLTVPFKKSVLQIVREVTVVTTRRILERITF 178

Query: 179 HYVSQRMAWKLLKDVPRSATRKAARKMPTLVYFFSVSRTTFRGHMLGVAASWLIQVGVDL 238
           HY S++MAW+L+KDVP SA RKA RKMPT +YFFSVS+ T RG+MLG+AASW++QVGV +
Sbjct: 179 HYGSRKMAWRLIKDVPTSAARKAGRKMPTYIYFFSVSKATCRGNMLGIAASWIVQVGVRI 238

Query: 239 YRFIKPMFKSKDEDIDGDKTKQVGPLAPKIVIATIRCTSSLIFASIGAGIGATIVRPSLG 298
           ++F     KS++ED   +K ++      K+ +AT+RC +SLIFASIG GIGAT++RPS+G
Sbjct: 239 FQFFAT--KSRNEDGSINKAERNRIFKQKVFLATLRCNASLIFASIGGGIGATLIRPSIG 296

Query: 299 QWIGCAVGDLTGPIIVACCLDQVFQVKL 326
           QWIGC VGDLTGP+IVA   ++V    L
Sbjct: 297 QWIGCTVGDLTGPVIVAVFANRVLHWDL 324


>Medtr4g055205.1 | transmembrane protein, putative | HC |
           chr4:20079580-20080453 | 20130731
          Length = 102

 Score =  121 bits (304), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 57/104 (54%), Positives = 78/104 (75%), Gaps = 2/104 (1%)

Query: 223 MLGVAASWLIQVGVDLYRFIKPMFKSKDEDIDGDKTKQVGPLAPKIVIATIRCTSSLIFA 282
           MLG+AASW++QVGV +++F     KS++ED   +K ++       + +AT+RC +SLIFA
Sbjct: 1   MLGIAASWIVQVGVRIFQFFAT--KSRNEDGSINKAERNRIFKQNVFLATLRCNASLIFA 58

Query: 283 SIGAGIGATIVRPSLGQWIGCAVGDLTGPIIVACCLDQVFQVKL 326
           SIG GIGAT++RPS+GQWIGCAVGDLTGP+IVA   ++V Q  L
Sbjct: 59  SIGGGIGATLIRPSIGQWIGCAVGDLTGPVIVAVFANRVLQWDL 102