Miyakogusa Predicted Gene

Lj0g3v0359979.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0359979.1 Non Characterized Hit- tr|B3RP07|B3RP07_TRIAD
Putative uncharacterized protein OS=Trichoplax
adhaere,28.73,2e-18,SURFEIT LOCUS PROTEIN 1,NULL; SURFEIT LOCUS
PROTEIN,NULL; seg,NULL; SURF1,Surfeit locus 1,CUFF.24777.1
         (343 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g069850.1 | surfeit locus 1 cytochrome C oxidase biogenesi...   473   e-134

>Medtr6g069850.1 | surfeit locus 1 cytochrome C oxidase biogenesis
           protein | HC | chr6:25197870-25202080 | 20130731
          Length = 333

 Score =  473 bits (1218), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 237/343 (69%), Positives = 258/343 (75%), Gaps = 10/343 (2%)

Query: 1   MPTLDSAARMLGELRRXXXXXXXXXXXXHVLTVRHFXXXXXXXXXXXXXXXXXXXXXXXX 60
           MP   SAAR+L ELRR                VR F                        
Sbjct: 1   MPPTTSAARILAELRRISTCTGISS------DVRPFSSAAAVSDSDPTLSSSSDSNGKAS 54

Query: 61  XXXXXWLLFLPGVMTFGLGTWQFFRREEKIKMLEYREKRLQMEPLNFSSAYPSNEELDSV 120
                W L+LPG + FGLG+WQ  RRE+KIKMLEYR KRLQMEPL FS AYPS+EELDS+
Sbjct: 55  K----WWLYLPGAIAFGLGSWQIVRREDKIKMLEYRGKRLQMEPLKFSGAYPSSEELDSL 110

Query: 121 EFRXXXXXXXXXXXXSIFVGPRSRSISGVTENGYYVITPLMPVHNYPNSVGFPILVNRGW 180
           EFR            SI+VGPRSRSISGVTENGYYVITPLMPVH++P+SV  PILVNRGW
Sbjct: 111 EFRKVVCKGVFDDKKSIYVGPRSRSISGVTENGYYVITPLMPVHDHPDSVSSPILVNRGW 170

Query: 181 VPRSWKDKFLEDSQDEQFADELPFPSQADGTRSWWRFWARKPVIIEDQAPSVTPIEVVGV 240
           VPRSWKDKFLE S DEQFAD LP PSQADGTRSWWRFW+++PV  EDQ PS+TP EVVGV
Sbjct: 171 VPRSWKDKFLEASHDEQFADPLPSPSQADGTRSWWRFWSKEPVSSEDQVPSITPNEVVGV 230

Query: 241 VRGSEKPSIFVPPNDPGSSQWFYVDVPGIARACGLPENTIYVEDINENVNPSNPYPVPKD 300
           VRGSE PSIFVP NDPGSSQWFY+DVP IAR+CGLPENT+YV+DINENVNPSNPYP+PKD
Sbjct: 231 VRGSENPSIFVPANDPGSSQWFYIDVPSIARSCGLPENTVYVDDINENVNPSNPYPLPKD 290

Query: 301 VNTLIRSSVMPQDHLNYILTWYSLSAAVTFMAFKRLRQKSKRR 343
           VN LIRSSVMPQDHLNYILTWYSLSAAVTFMAFKRLRQ +KRR
Sbjct: 291 VNALIRSSVMPQDHLNYILTWYSLSAAVTFMAFKRLRQSNKRR 333