Miyakogusa Predicted Gene

Lj0g3v0359529.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0359529.1 Non Characterized Hit- tr|G7IRK2|G7IRK2_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,52.76,5e-17,seg,NULL,CUFF.24741.1
         (129 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g089190.1 | transmembrane protein, putative | HC | chr2:37...    82   2e-16
Medtr0945s0020.1 | transmembrane protein, putative | HC | scaffo...    81   2e-16

>Medtr2g089190.1 | transmembrane protein, putative | HC |
           chr2:37657784-37658161 | 20130731
          Length = 125

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/127 (41%), Positives = 72/127 (56%), Gaps = 10/127 (7%)

Query: 1   MTRVGFVFVFVLVTQILVLQALALKSEAKSEPPMSMELKTQREVQPSDQKTEKLXXXXXX 60
           M++VG VF+  L+T I ++   A++    SE P  MELK  REVQ S  K++K+      
Sbjct: 1   MSKVGLVFL--LITHIFLVALQAMEDVHYSEAPAPMELKNHREVQLSYHKSDKISTTS-- 56

Query: 61  XXXXXXREEGKSKAEEEVAEAPHNRRMGKHHSTDKSVXXXXXXXXXXXXXXFAAVFCYIR 120
                 +EEG+ +++EE A AP  RRMGKHHS+   +              FA VFCYIR
Sbjct: 57  ------KEEGERESKEENAMAPDYRRMGKHHSSSSEMAGGGVIIGGLVSATFAVVFCYIR 110

Query: 121 VTRKRDS 127
           VTRK+DS
Sbjct: 111 VTRKKDS 117


>Medtr0945s0020.1 | transmembrane protein, putative | HC |
           scaffold0945:3196-2858 | 20130731
          Length = 112

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 17/129 (13%)

Query: 1   MTRVGFVFVFVLVTQILVLQALALKSEAKSEPPMSMELKTQREVQPSDQKTEKLXXXXXX 60
           M ++GFV + ++   ++ +QA+  +S+A+S  P  +E KTQ  V+  D  T+K+      
Sbjct: 1   MNKIGFVVLLLVHILVVQVQAMTHESKAQS--PFPLEHKTQIGVELHDHNTDKV------ 52

Query: 61  XXXXXXREEGKSKAEEEVAEAPHNRRMGKHHSTDKSVXXXXXXXXXXXXXXFAAVFCYIR 120
                  E+ K  AE   AEAP+ RR+GKHHSTDKSV              FAAVFCYIR
Sbjct: 53  -------EDHKVSAES--AEAPNIRRLGKHHSTDKSVAGGGVIIGGFVTAVFAAVFCYIR 103

Query: 121 VTRKRDSGH 129
           VTRKRD+G+
Sbjct: 104 VTRKRDTGY 112