Miyakogusa Predicted Gene

Lj0g3v0359139.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0359139.1 tr|A8IYQ5|A8IYQ5_CHLRE Predicted protein
(Fragment) OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_14813,26.23,0.00000000000005,SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,NULL; CytochromB561_N,Cytochrome
B561-related,CUFF.24707.1
         (368 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g060500.1 | cytochrome B561, amine-terminal protein | HC |...   636   0.0  

>Medtr4g060500.1 | cytochrome B561, amine-terminal protein | HC |
           chr4:22249174-22254111 | 20130731
          Length = 679

 Score =  636 bits (1641), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/371 (85%), Positives = 344/371 (92%), Gaps = 3/371 (0%)

Query: 1   MSPGSQKFKTPPKKGEG-DLPPPMSMEESIEAFEQLGIYPQIEQWRDQLRQWFSTVLLNP 59
           MSPGSQKFKTPPKKGEG DLPPPMSMEE++EAF+ LG+YPQIEQW D LRQWFS+VLLNP
Sbjct: 309 MSPGSQKFKTPPKKGEGGDLPPPMSMEEAVEAFDHLGVYPQIEQWCDGLRQWFSSVLLNP 368

Query: 60  LIHKIETSHVQVMQAAAKLGISITISQVGNDMLSTGSALPTT--DKTQDWQPALTFNEDG 117
           L+HKIETSHVQVM  AAKLGISIT++QVGND LSTG+   ++  DKTQDWQP++T +EDG
Sbjct: 369 LLHKIETSHVQVMNTAAKLGISITVNQVGNDTLSTGTPSTSSSIDKTQDWQPSVTLSEDG 428

Query: 118 LLHQLNSTLVQAIEASKSKLLVSNMQQSPQQTPSVPIMQECVDAITEHQRLQALVKGEWV 177
           LLHQL+STLVQAIEASKS   V NMQQSPQQ P VP+MQ+CVDAI EHQRLQALVKGEWV
Sbjct: 429 LLHQLHSTLVQAIEASKSNSFVPNMQQSPQQGPLVPVMQDCVDAIIEHQRLQALVKGEWV 488

Query: 178 KGLLPQSSVRADYTIQRIRELAEGTCLKNYEYLGSGEVYDKKNKKWTLELPSDSHLLLYL 237
           KGLLPQSSVRADYT+QRIRELAEGTCLKNYEYLGSGEVYDKKNKKWTLELPSDSHLLLYL
Sbjct: 489 KGLLPQSSVRADYTVQRIRELAEGTCLKNYEYLGSGEVYDKKNKKWTLELPSDSHLLLYL 548

Query: 238 FCAFLEHPKWILHADAMSYTGAQSSKNPLFLGVLPPKERFPEKCIAVVSSVPSVLHPGAC 297
           FCAFLEHPKW+LH DA SY GAQSSKNPLFLGVLPPK+RFPEK I+VVSSVPSVLHPGAC
Sbjct: 549 FCAFLEHPKWMLHVDATSYAGAQSSKNPLFLGVLPPKDRFPEKYISVVSSVPSVLHPGAC 608

Query: 298 MLVVGKQGPPIFALYWDKKAQFSLQGRTALWDSILLLCHKVKVGYGGIIRGIHLGAPALN 357
           +LVVGKQGPPIFALYWDKK Q SLQGRTALWDSIL+LCHK+KVGYGGI+RG+HLGA AL+
Sbjct: 609 ILVVGKQGPPIFALYWDKKLQLSLQGRTALWDSILILCHKIKVGYGGIVRGMHLGASALS 668

Query: 358 ILPVLETESED 368
           ILPV+ETESED
Sbjct: 669 ILPVMETESED 679