Miyakogusa Predicted Gene

Lj0g3v0359049.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0359049.1 tr|G7K6Y7|G7K6Y7_MEDTR Microtubule-associated
protein TORTIFOLIA1 OS=Medicago truncatula
GN=MTR_5g03,70.15,0,seg,NULL; HEAT,HEAT; ARM repeat,Armadillo-type
fold; no description,Armadillo-like helical; FAMILY N,CUFF.24700.1
         (660 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g036950.1 | microtubule-associated TORTIFOLIA-like protein...   860   0.0  
Medtr4g107110.1 | microtubule-associated TORTIFOLIA-like protein...   389   e-108
Medtr4g107110.2 | microtubule-associated TORTIFOLIA-like protein...   271   2e-72
Medtr6g093150.1 | microtubule-associated TORTIFOLIA-like protein...   135   1e-31
Medtr3g050060.1 | microtubule-associated TORTIFOLIA-like protein...   108   2e-23
Medtr3g050060.2 | microtubule-associated TORTIFOLIA-like protein...   108   2e-23
Medtr6g093150.2 | microtubule-associated TORTIFOLIA-like protein...    62   1e-09
Medtr4g010610.1 | hypothetical protein | LC | chr4:2465971-24650...    55   3e-07

>Medtr5g036950.1 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr5:16127767-16132301 | 20130731
          Length = 750

 Score =  860 bits (2222), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/680 (65%), Positives = 517/680 (76%), Gaps = 25/680 (3%)

Query: 1   MSYRRHSLSGPPQLISSGSTQELRQRVIACLNKLSDRDTLACATAELESIARTLTHDSFS 60
           MS RRHSLSGPPQL ++ +   LRQRVI CLNKLSDRDTLA AT ELESIA+TL HD+FS
Sbjct: 1   MSSRRHSLSGPPQLTAT-TPPNLRQRVITCLNKLSDRDTLAGATVELESIAKTLNHDTFS 59

Query: 61  SFLSCIHNTDSSSKSPVRKQCVHLLTLLSRFHGDALSPFLSKMISTVLLRLRDTDSAVRS 120
           SFLSCIHNTDSS+KSPVRKQCV+LLTLLS+FHGDALSPFLSKMI+TVL R+ D D+ VRS
Sbjct: 60  SFLSCIHNTDSSTKSPVRKQCVNLLTLLSKFHGDALSPFLSKMIATVLRRIHDPDTVVRS 119

Query: 121 ACVDAVSAMSSRITRPSFSVSFLKPFMDALAQEQDGNSQIGXXXXXXXXXXXXXXXXXXS 180
           ACV+AV+ MS RITRP+F+V+FL+PFM+AL  EQD N+QIG                   
Sbjct: 120 ACVEAVAEMSLRITRPAFAVAFLRPFMEALTVEQDVNAQIGGALCLAAAVEAAPEVDVEL 179

Query: 181 LRRSALPRLGKLLKKDTCKARAALLVLVGSVV-------------------EFLSSEDWT 221
           LRR+ LPRLGK+LK ++CKA+A +LVL+GSVV                   E L SEDWT
Sbjct: 180 LRRNTLPRLGKVLKTESCKAKAPVLVLIGSVVSVGGAASRGTMNWLVPYLVELLGSEDWT 239

Query: 222 VRKASAEALGKVASVEKGLASQHKVLCVDSLQNRRFDKVKVVRETMNLTLEMWKEVTNVS 281
           VRKASAEALGKVASVE+  A+QHKVLC++SLQNRRFDKVKVVRETMN  L+MWKEV +VS
Sbjct: 240 VRKASAEALGKVASVERDFATQHKVLCLESLQNRRFDKVKVVRETMNRVLDMWKEVKDVS 299

Query: 282 EDVPAPVKSACASV--EDGKGQCVAKSSPCIGPKSSQSKKTVPSSRSPPSTASFVSSIKR 339
           E+V +PVKSACASV  +DG G+C  +SSP +G K SQ KK VPS+RSPPST S +SS KR
Sbjct: 300 ENVSSPVKSACASVGTDDGNGRCGTRSSP-VGSKFSQPKKMVPSNRSPPSTGSILSSGKR 358

Query: 340 EGALKSNNKDLRVRAMHQQNHSEISDEKLDTPVLKLPPSNIS-FDDIKRCDFEASKPAPY 398
           E  L +N+K+ R+  +HQQ H ++SDEKL++P+ K   SN++  DDIKRCDFEASKPAP 
Sbjct: 359 ESPLNNNDKNSRMGMLHQQAHKKLSDEKLESPISKSSLSNMTKEDDIKRCDFEASKPAPN 418

Query: 399 QNGVNSRVDIKRVLFSKMSDEKVRKFGGSKPRVVPCYXXXXXXXXVRVSNVSEACESSQD 458
           QN  N R D+KRV  +KMSDEK+RKFGGSK RVVPCY        V V+N +E CES QD
Sbjct: 419 QNATNLRADVKRVFGNKMSDEKIRKFGGSKARVVPCYDDDDLETDVTVNNDNEICESPQD 478

Query: 459 VEDLSLIREQLIXXXXXXXXXXXXXXRFIGSSQTGMNSLETRVYGLEMALDEISHDLALS 518
           VEDLSLIR+QL+              RFIG+SQ GMN LETRVYGLEMALDEIS+DLA+S
Sbjct: 479 VEDLSLIRDQLVQIENQQSNLLDLLQRFIGTSQNGMNLLETRVYGLEMALDEISYDLAVS 538

Query: 519 SGRIPNTDAIEDTCCKLPGTDFLSSKFWKRNEGRYSTSRRFSLGSSASPTAVHNATDGNG 578
           SGRIPNTDAI+D CCKLPGTDFLSSKFWK+ + RY+TS R S GSSAS   VHNATD NG
Sbjct: 539 SGRIPNTDAIDDMCCKLPGTDFLSSKFWKKTDSRYTTS-RLSFGSSASTNLVHNATDRNG 597

Query: 579 SREVLTANNKKNQHRRGGGGFLVNPLAEVQSDLKEHLGQHSYKMSTNMVQDAERPQVNSA 638
           S+E+ T N+K+ QHRR  GG  +NPLAE+QS+LK   GQHSYK+S N  QDA   Q NS+
Sbjct: 598 SKEIFTTNSKRFQHRRDEGGSFMNPLAEIQSNLKGSSGQHSYKISKNFAQDAGSAQSNSS 657

Query: 639 CRFGGISSTSGALRNQNIRS 658
            RF GISST   LRNQNIRS
Sbjct: 658 SRFDGISSTIEVLRNQNIRS 677


>Medtr4g107110.1 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr4:44240560-44242921 | 20130731
          Length = 602

 Score =  389 bits (999), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 255/618 (41%), Positives = 356/618 (57%), Gaps = 49/618 (7%)

Query: 19  STQELRQRVIACLNKLSDRDTLACATAELESIARTLTHDSFSSFLSCIHNTDSSSKSPVR 78
           S Q ++Q+V  CL KLSDRDT + A  EL +IAR L   +   FLSC+++TD+S KSPVR
Sbjct: 3   SPQNVKQKVFTCLTKLSDRDTHSLAATELITIARNLDTTTVPVFLSCMYSTDASDKSPVR 62

Query: 79  KQCVHLLTLLSRFHGDALSPFLSKMISTVLLRLRDTDSAVRSACVDAVSAMSSRITRPSF 138
           KQCV L  LLS  HG+ LSP+LSK+++ V+ RLRDTDS+VRSACV++VSA+S  +T+  F
Sbjct: 63  KQCVQLFGLLSETHGNTLSPYLSKILANVIRRLRDTDSSVRSACVNSVSALSCHVTKQPF 122

Query: 139 SVSFLKPFMDALAQEQDGNSQIGXXXXXXXXXXXXXXXXXXSLRRSALPRLGKLLKKDTC 198
             +FLKP  +AL  EQ+ N+QIG                   L +  LP+  KLLK++  
Sbjct: 123 -YTFLKPLSEALFTEQEQNAQIGAALCLASAIDGAPDPEPARLAK-LLPKFQKLLKREVF 180

Query: 199 KARAALLVLVGSVVEF-------------------LSSEDWTVRKASAEALGKVASVEKG 239
           KA+ ALL L+GSVVE                    LS+ DW VRKA+AE L  +A+VE+ 
Sbjct: 181 KAKPALLTLIGSVVEAGGASGHASLKNLVPCLVESLSNRDWAVRKAAAETLVVLANVERD 240

Query: 240 LASQHKVLCVDSLQNRRFDKVKVVRETMNLTLEMWKEVTNVSEDVPAPVKSACASVE--- 296
             S+ K  C+    NRRFDKVK+VRE MN  LE WK + +VS+D   P KS  +S E   
Sbjct: 241 FLSEFKADCMKVFDNRRFDKVKLVREVMNQMLEAWKHIPDVSDDFSPPPKSQSSSKENAS 300

Query: 297 DGKGQCVAKSSPCIGP-KSSQSKKTVPSSRSPPSTASFVSSIKREGALKSNN-KDLRV-R 353
           DG+   V+++S   G   ++  +++ P +R  P  +S  S+ K   +L SN  + L V R
Sbjct: 301 DGRYPPVSQNSCNPGSVMANLRRRSAPVNRFSPPDSSTASNGKNVSSLSSNKRRSLGVSR 360

Query: 354 AMHQQNHSEISDEKLDTPVLKLPPSNISFDDIKRCDFEASKPAPYQNGVNSRVDIKRVLF 413
            ++Q+N         D  V       +   D      E SK          + ++ R L 
Sbjct: 361 KLNQKN--------WDVQVAMADQGELQERDENGTPLETSK---VDKSRFLKPEMNRALL 409

Query: 414 SKMSDEKVRKFGGSKPRVVPCYXXXXXXXXVRVSNVS-EACESSQDVEDLSLIREQLIXX 472
           +K SD++++K GGS  RVVP +        V V+NVS +  ++ ++ E+LSLIR QL   
Sbjct: 410 NKNSDDRIKKHGGS--RVVPYH--EESQDSVPVNNVSKDLFKNDKESEELSLIRNQLQQI 465

Query: 473 XXXXXXXXXXXXRFIGSSQTGMNSLETRVYGLEMALDEISHDLALSSGRIPNTDAIEDTC 532
                       +FIGSSQ GM SLETRV+GLE+ALD+IS+DLA+S+GR+ N++   ++C
Sbjct: 466 EKQQSSLLDLLQKFIGSSQNGMRSLETRVHGLELALDDISYDLAVSNGRMTNSNVPRNSC 525

Query: 533 CKLPGTDFLSSKFWKRNEGRYSTSRRFSLGSSASPTAVHNATDGNGSREVLTANNKKNQH 592
           C LPG DFLSSKFW++ +G+YS S +FS    A   A  + T G  +    T+     Q 
Sbjct: 526 CLLPGADFLSSKFWRKTQGQYS-SPQFSRRGGAPSLATTHYTAGRNAETNFTS-----QR 579

Query: 593 RRGGGGFLVNPLAEVQSD 610
            R  GGF+ NPLAEV ++
Sbjct: 580 FRLDGGFITNPLAEVHTN 597


>Medtr4g107110.2 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr4:44240560-44242376 | 20130731
          Length = 480

 Score =  271 bits (692), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 191/477 (40%), Positives = 269/477 (56%), Gaps = 43/477 (9%)

Query: 19  STQELRQRVIACLNKLSDRDTLACATAELESIARTLTHDSFSSFLSCIHNTDSSSKSPVR 78
           S Q ++Q+V  CL KLSDRDT + A  EL +IAR L   +   FLSC+++TD+S KSPVR
Sbjct: 3   SPQNVKQKVFTCLTKLSDRDTHSLAATELITIARNLDTTTVPVFLSCMYSTDASDKSPVR 62

Query: 79  KQCVHLLTLLSRFHGDALSPFLSKMISTVLLRLRDTDSAVRSACVDAVSAMSSRITRPSF 138
           KQCV L  LLS  HG+ LSP+LSK+++ V+ RLRDTDS+VRSACV++VSA+S  +T+  F
Sbjct: 63  KQCVQLFGLLSETHGNTLSPYLSKILANVIRRLRDTDSSVRSACVNSVSALSCHVTKQPF 122

Query: 139 SVSFLKPFMDALAQEQDGNSQIGXXXXXXXXXXXXXXXXXXSLRRSALPRLGKLLKKDTC 198
             +FLKP  +AL  EQ+ N+QIG                   L +  LP+  KLLK++  
Sbjct: 123 -YTFLKPLSEALFTEQEQNAQIGAALCLASAIDGAPDPEPARLAK-LLPKFQKLLKREVF 180

Query: 199 KARAALLVLVGSVVEF-------------------LSSEDWTVRKASAEALGKVASVEKG 239
           KA+ ALL L+GSVVE                    LS+ DW VRKA+AE L  +A+VE+ 
Sbjct: 181 KAKPALLTLIGSVVEAGGASGHASLKNLVPCLVESLSNRDWAVRKAAAETLVVLANVERD 240

Query: 240 LASQHKVLCVDSLQNRRFDKVKVVRETMNLTLEMWKEVTNVSEDVPAPVKSACASVE--- 296
             S+ K  C+    NRRFDKVK+VRE MN  LE WK + +VS+D   P KS  +S E   
Sbjct: 241 FLSEFKADCMKVFDNRRFDKVKLVREVMNQMLEAWKHIPDVSDDFSPPPKSQSSSKENAS 300

Query: 297 DGKGQCVAKSSPCIGP-KSSQSKKTVPSSRSPPSTASFVSSIKREGALKSNN-KDLRV-R 353
           DG+   V+++S   G   ++  +++ P +R  P  +S  S+ K   +L SN  + L V R
Sbjct: 301 DGRYPPVSQNSCNPGSVMANLRRRSAPVNRFSPPDSSTASNGKNVSSLSSNKRRSLGVSR 360

Query: 354 AMHQQNHSEISDEKLDTPVLKLPPSNISFDDIKRCDFEASKPAPYQNGVNSRVDIKRVLF 413
            ++Q+N         D  V       +   D      E SK          + ++ R L 
Sbjct: 361 KLNQKN--------WDVQVAMADQGELQERDENGTPLETSK---VDKSRFLKPEMNRALL 409

Query: 414 SKMSDEKVRKFGGSKPRVVPCYXXXXXXXXVRVSNVS-EACESSQDVEDLSLIREQL 469
           +K SD++++K GGS  RVVP +        V V+NVS +  ++ ++ E+LSLIR QL
Sbjct: 410 NKNSDDRIKKHGGS--RVVPYH--EESQDSVPVNNVSKDLFKNDKESEELSLIRNQL 462


>Medtr6g093150.1 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr6:35169731-35173672 | 20130731
          Length = 816

 Score =  135 bits (341), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/277 (33%), Positives = 135/277 (48%), Gaps = 24/277 (8%)

Query: 22  ELRQRVIACLNKLSDRDTLACATAELESIARTLTHDSFSSFLSCIHNTDSSSKSPVRKQC 81
           E++QRV   LNK+ DRDT    T ELE+I  +LT  S S FLSCI +  S  K  +RKQ 
Sbjct: 12  EMKQRVHNALNKVGDRDTHDIGTKELETILHSLTPHSISPFLSCILDIHSELKPSIRKQS 71

Query: 82  VHLLTLLSRFHGDALSPFLSKMISTVLLRLRDTDSAVRSACVDAVSAMSSRITRPS---- 137
           + L+  L+  +   + P L+K++++V+   RD DS+VR  CV+  S ++ ++        
Sbjct: 72  LKLIASLATVYESLILPHLTKIVASVVKCFRDPDSSVREGCVEIFSVLALKLANQGNEDK 131

Query: 138 FSVSFLKPFMDALAQEQDGNSQIGXXXXXXXXXXXXXXXXXXSLRRSALPRLGKLLKKDT 197
             V    P  DAL  EQ+ + Q                    S+    L R+ KLLK   
Sbjct: 132 VFVLLSSPIFDALVGEQNKHVQ-SASAFCLAGIVQNTRNPPVSVLYGMLIRILKLLKNPH 190

Query: 198 CKARAALLVL-------------------VGSVVEFLSSEDWTVRKASAEALGKVASVEK 238
             A+ AL+ L                   VGS+ E L+  DW  RKA++ ALG++A    
Sbjct: 191 FMAKPALIELNRCIIQAGGASTQSVLLTAVGSIREGLNDTDWKTRKAASVALGQIALTRA 250

Query: 239 GLASQHKVLCVDSLQNRRFDKVKVVRETMNLTLEMWK 275
              S  +  C+ SL + RFDKVK VR+ +   L+ WK
Sbjct: 251 SFLSSLRASCIHSLDSSRFDKVKPVRDAVLQALKYWK 287


>Medtr3g050060.1 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr3:19709809-19717288 | 20130731
          Length = 924

 Score =  108 bits (270), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 140/293 (47%), Gaps = 37/293 (12%)

Query: 22  ELRQRVIACLNKLSDRDTLACATAELESIARTLTHDSFSSFLSCIHNTDSSSKSPVRKQC 81
           EL+Q+++  L+KLSDRDT   A  +LE    +LT D+    L+C++   S  K  ++ + 
Sbjct: 27  ELKQKILTSLSKLSDRDTHQIALEDLEKTILSLTPDAIPMILNCLYEAVSDPKPSIKNES 86

Query: 82  VHLLTLLSRFHGDALSPFLSKMISTVLLRLRDTDSAVRSACVDAVSAMSSRITRPSFSVS 141
           + LL+ +   H  + SP L K+IS ++ RL+DTDSA R AC D++ ++++   R   + +
Sbjct: 87  LRLLSFVCSSHPHSTSPHLPKIISHIVKRLKDTDSASRDACRDSIGSIAALYLRGENNGN 146

Query: 142 ------------FLKPFMDALAQEQ---DGNSQIGXXXXXXXXXXXXXXXXXXSLRRSAL 186
                       F+KP  +A+ ++     G + I                    +   A 
Sbjct: 147 NGSNGNGSLVGLFVKPLFEAMGEQNKAVQGGAAICMAKMVEMTAAVEEGGGAAVVPVGAF 206

Query: 187 ----PRLGKLLKKDTCKARAALLV------------------LVGSVVEFLSSEDWTVRK 224
               PR+ KL+      A+AA+L                   L+ S+ + LSS DW  RK
Sbjct: 207 QKMCPRICKLINNPNFLAKAAILPVVSALSQAGAIAPQSLDNLLSSIHDCLSSSDWATRK 266

Query: 225 ASAEALGKVASVEKGLASQHKVLCVDSLQNRRFDKVKVVRETMNLTLEMWKEV 277
           A+AEAL  +A     L +      V  L+  R DK++ VR++M   L++WK++
Sbjct: 267 AAAEALSSLALHSSSLITDKTTPTVTLLEACRVDKIRPVRDSMTEALDLWKKI 319


>Medtr3g050060.2 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr3:19709809-19717265 | 20130731
          Length = 913

 Score =  108 bits (269), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 140/293 (47%), Gaps = 37/293 (12%)

Query: 22  ELRQRVIACLNKLSDRDTLACATAELESIARTLTHDSFSSFLSCIHNTDSSSKSPVRKQC 81
           EL+Q+++  L+KLSDRDT   A  +LE    +LT D+    L+C++   S  K  ++ + 
Sbjct: 27  ELKQKILTSLSKLSDRDTHQIALEDLEKTILSLTPDAIPMILNCLYEAVSDPKPSIKNES 86

Query: 82  VHLLTLLSRFHGDALSPFLSKMISTVLLRLRDTDSAVRSACVDAVSAMSSRITRPSFSVS 141
           + LL+ +   H  + SP L K+IS ++ RL+DTDSA R AC D++ ++++   R   + +
Sbjct: 87  LRLLSFVCSSHPHSTSPHLPKIISHIVKRLKDTDSASRDACRDSIGSIAALYLRGENNGN 146

Query: 142 ------------FLKPFMDALAQEQ---DGNSQIGXXXXXXXXXXXXXXXXXXSLRRSAL 186
                       F+KP  +A+ ++     G + I                    +   A 
Sbjct: 147 NGSNGNGSLVGLFVKPLFEAMGEQNKAVQGGAAICMAKMVEMTAAVEEGGGAAVVPVGAF 206

Query: 187 ----PRLGKLLKKDTCKARAALLV------------------LVGSVVEFLSSEDWTVRK 224
               PR+ KL+      A+AA+L                   L+ S+ + LSS DW  RK
Sbjct: 207 QKMCPRICKLINNPNFLAKAAILPVVSALSQAGAIAPQSLDNLLSSIHDCLSSSDWATRK 266

Query: 225 ASAEALGKVASVEKGLASQHKVLCVDSLQNRRFDKVKVVRETMNLTLEMWKEV 277
           A+AEAL  +A     L +      V  L+  R DK++ VR++M   L++WK++
Sbjct: 267 AAAEALSSLALHSSSLITDKTTPTVTLLEACRVDKIRPVRDSMTEALDLWKKI 319


>Medtr6g093150.2 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr6:35169715-35173662 | 20130731
          Length = 659

 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 45/75 (60%)

Query: 201 RAALLVLVGSVVEFLSSEDWTVRKASAEALGKVASVEKGLASQHKVLCVDSLQNRRFDKV 260
           ++ LL  VGS+ E L+  DW  RKA++ ALG++A       S  +  C+ SL + RFDKV
Sbjct: 56  QSVLLTAVGSIREGLNDTDWKTRKAASVALGQIALTRASFLSSLRASCIHSLDSSRFDKV 115

Query: 261 KVVRETMNLTLEMWK 275
           K VR+ +   L+ WK
Sbjct: 116 KPVRDAVLQALKYWK 130


>Medtr4g010610.1 | hypothetical protein | LC | chr4:2465971-2465055
           | 20130731
          Length = 107

 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/30 (70%), Positives = 25/30 (83%)

Query: 522 IPNTDAIEDTCCKLPGTDFLSSKFWKRNEG 551
           IPNTDA++D CCKL  TDFL+SKFWK+ E 
Sbjct: 2   IPNTDAVQDMCCKLSCTDFLNSKFWKKTES 31