Miyakogusa Predicted Gene

Lj0g3v0358599.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0358599.1 Non Characterized Hit- tr|I1MTN1|I1MTN1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5527
PE=,93.78,0,seg,NULL; PUTATIVE UNCHARACTERIZED PROTEIN,NULL;
TRANSPORTIN 3 AND IMPORTIN 13,NULL; ARM repeat,Arma,CUFF.24686.1
         (547 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g107290.1 | transportin-like protein | HC | chr4:44338586-...   972   0.0  
Medtr4g107290.2 | transportin-like protein | HC | chr4:44338575-...   969   0.0  
Medtr7g084880.1 | transportin-like protein | HC | chr7:32792485-...   106   5e-23

>Medtr4g107290.1 | transportin-like protein | HC |
           chr4:44338586-44322940 | 20130731
          Length = 960

 Score =  972 bits (2512), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/547 (87%), Positives = 502/547 (91%)

Query: 1   MELQNTVKEALNALYHHPDDTVRMQADRYLQEFQRTLDAWQVADNLLHDPSSNLETLIFC 60
           MELQNTVK+ALNALYHHPDDTVRMQADR+LQ FQRTLDAWQVADNLLHDPSSNLETLIFC
Sbjct: 1   MELQNTVKDALNALYHHPDDTVRMQADRFLQNFQRTLDAWQVADNLLHDPSSNLETLIFC 60

Query: 61  SQTLRSKVQRDFEELPATAFRPLRDSLNNLLKKFHKGPPKVRTQISIAVAALAVHVPAED 120
           SQTLRSKVQRDFEELP TAFRPLRDSLNNLLK FH+GPPKVRTQISIAVAALAVHVPA+D
Sbjct: 61  SQTLRSKVQRDFEELPPTAFRPLRDSLNNLLKMFHRGPPKVRTQISIAVAALAVHVPAQD 120

Query: 121 WGDGGIVKWLRDEMDSHPEYIPGFXXXXXXXXXXXXNYKIAARPERRRQFEKELTSQLEV 180
           WGDGGIVKWLRDEMDS+PEYIPGF            NYKIAARPERRRQFEKELTSQ+EV
Sbjct: 121 WGDGGIVKWLRDEMDSNPEYIPGFLELLTVLPEEVLNYKIAARPERRRQFEKELTSQMEV 180

Query: 181 ALNILTACLAISELKEQVLEAFASWLRLKHGIPGSVLSSHPLVLTALSSLNSDLLSEASV 240
           ALNILTACL+I+ELKEQVLEAFASWLRLKHGIPGSVLSSHPLVLTALS+LNS+LLSEASV
Sbjct: 181 ALNILTACLSIAELKEQVLEAFASWLRLKHGIPGSVLSSHPLVLTALSNLNSELLSEASV 240

Query: 241 NVILELIHYTAVANIDGVSANMPLIQVIVPQVMNLKAQLSDSTKDEEDVKAIARLFADMG 300
           NVI ELIHYT   NIDGVS N PLIQVIVP VMNLK+QLSDSTKDEEDVKAIARLFADMG
Sbjct: 241 NVISELIHYTTAGNIDGVSTNAPLIQVIVPHVMNLKSQLSDSTKDEEDVKAIARLFADMG 300

Query: 301 DSYVELIATGSDESMLIVQALLEVASHPEYDIASMTFNFWHSLQLNLTKKESYISYGTEA 360
           DSYVELIATGSDESMLIV ALLEVASHPEYDIASMTFNFWHSLQLNLT++ESYISYG EA
Sbjct: 301 DSYVELIATGSDESMLIVHALLEVASHPEYDIASMTFNFWHSLQLNLTRRESYISYGNEA 360

Query: 361 CIEAERNRRLQVFRPAYESLVSLVSYRVQYPEDYQDLSYEDLKEFKQTKYAVADVLTDAA 420
           CIEAERN+RLQVFRPAYESLVSLVSYRVQYPEDYQDLS EDLK+ K TK+AVADVLTDAA
Sbjct: 361 CIEAERNKRLQVFRPAYESLVSLVSYRVQYPEDYQDLSSEDLKDLKHTKFAVADVLTDAA 420

Query: 421 SVLSGDATLRILYMKLLEAVSGHGNSEQKEWRPAEAALFCIRAISNYVSVVEAEVMPQIM 480
           SVL GDATL+ILYMKL+EAVSG+ ++EQKEWRPAEAALFCIRAIS+YVSVVEAEVMPQIM
Sbjct: 421 SVLGGDATLKILYMKLVEAVSGNSSNEQKEWRPAEAALFCIRAISSYVSVVEAEVMPQIM 480

Query: 481 AXXXXXXXXXXXXXTVCLTIGAYSKWLDSASCGVSILPSVLDILMNGMGTSEDCAAAAAL 540
           A             TVC TIGAYSKWLD+A CG+SILPSVLDILMNGM TSE+CAAAAAL
Sbjct: 481 ALLPKLPPVPQLLQTVCGTIGAYSKWLDTAPCGLSILPSVLDILMNGMSTSEECAAAAAL 540

Query: 541 AFRHICD 547
           AFRHICD
Sbjct: 541 AFRHICD 547


>Medtr4g107290.2 | transportin-like protein | HC |
           chr4:44338575-44324517 | 20130731
          Length = 838

 Score =  969 bits (2504), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/547 (87%), Positives = 502/547 (91%)

Query: 1   MELQNTVKEALNALYHHPDDTVRMQADRYLQEFQRTLDAWQVADNLLHDPSSNLETLIFC 60
           MELQNTVK+ALNALYHHPDDTVRMQADR+LQ FQRTLDAWQVADNLLHDPSSNLETLIFC
Sbjct: 1   MELQNTVKDALNALYHHPDDTVRMQADRFLQNFQRTLDAWQVADNLLHDPSSNLETLIFC 60

Query: 61  SQTLRSKVQRDFEELPATAFRPLRDSLNNLLKKFHKGPPKVRTQISIAVAALAVHVPAED 120
           SQTLRSKVQRDFEELP TAFRPLRDSLNNLLK FH+GPPKVRTQISIAVAALAVHVPA+D
Sbjct: 61  SQTLRSKVQRDFEELPPTAFRPLRDSLNNLLKMFHRGPPKVRTQISIAVAALAVHVPAQD 120

Query: 121 WGDGGIVKWLRDEMDSHPEYIPGFXXXXXXXXXXXXNYKIAARPERRRQFEKELTSQLEV 180
           WGDGGIVKWLRDEMDS+PEYIPGF            NYKIAARPERRRQFEKELTSQ+EV
Sbjct: 121 WGDGGIVKWLRDEMDSNPEYIPGFLELLTVLPEEVLNYKIAARPERRRQFEKELTSQMEV 180

Query: 181 ALNILTACLAISELKEQVLEAFASWLRLKHGIPGSVLSSHPLVLTALSSLNSDLLSEASV 240
           ALNILTACL+I+ELKEQVLEAFASWLRLKHGIPGSVLSSHPLVLTALS+LNS+LLSEASV
Sbjct: 181 ALNILTACLSIAELKEQVLEAFASWLRLKHGIPGSVLSSHPLVLTALSNLNSELLSEASV 240

Query: 241 NVILELIHYTAVANIDGVSANMPLIQVIVPQVMNLKAQLSDSTKDEEDVKAIARLFADMG 300
           NVI ELIHYT   NIDGVS N PLIQVIVP VMNLK+QLSDSTKDEEDVKAIARLFADMG
Sbjct: 241 NVISELIHYTTAGNIDGVSTNAPLIQVIVPHVMNLKSQLSDSTKDEEDVKAIARLFADMG 300

Query: 301 DSYVELIATGSDESMLIVQALLEVASHPEYDIASMTFNFWHSLQLNLTKKESYISYGTEA 360
           DSYVELIATGSDESMLIV ALLEVASHPEYDIASMTFNFWHSLQLNLT++ESYISYG EA
Sbjct: 301 DSYVELIATGSDESMLIVHALLEVASHPEYDIASMTFNFWHSLQLNLTRRESYISYGNEA 360

Query: 361 CIEAERNRRLQVFRPAYESLVSLVSYRVQYPEDYQDLSYEDLKEFKQTKYAVADVLTDAA 420
           CIEAERN+RLQVFRPAYESLVSLVSYRVQYPEDYQDLS EDLK+ K TK+AVADVLTDAA
Sbjct: 361 CIEAERNKRLQVFRPAYESLVSLVSYRVQYPEDYQDLSSEDLKDLKHTKFAVADVLTDAA 420

Query: 421 SVLSGDATLRILYMKLLEAVSGHGNSEQKEWRPAEAALFCIRAISNYVSVVEAEVMPQIM 480
           SVL GDATL+ILYMKL+EAVSG+ ++EQKEWRPAEAALFCIRAIS+YVSVVEAEVMPQIM
Sbjct: 421 SVLGGDATLKILYMKLVEAVSGNSSNEQKEWRPAEAALFCIRAISSYVSVVEAEVMPQIM 480

Query: 481 AXXXXXXXXXXXXXTVCLTIGAYSKWLDSASCGVSILPSVLDILMNGMGTSEDCAAAAAL 540
           A             TVC TIGAYSKWLD+A CG+SILPSVLDILMNGM TSE+CAAAAAL
Sbjct: 481 ALLPKLPPVPQLLQTVCGTIGAYSKWLDTAPCGLSILPSVLDILMNGMSTSEECAAAAAL 540

Query: 541 AFRHICD 547
           AFRHICD
Sbjct: 541 AFRHICD 547


>Medtr7g084880.1 | transportin-like protein | HC |
           chr7:32792485-32774045 | 20130731
          Length = 987

 Score =  106 bits (265), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 141/575 (24%), Positives = 243/575 (42%), Gaps = 68/575 (11%)

Query: 1   MELQNTVKEALNALYHHPDDTVRMQADRYLQEFQRTLDAWQVADNLLHDP---SSNLETL 57
           MEL   V EA++ L H      R+ A+++L +FQ+T  AW VA N+L      +SN E  
Sbjct: 1   MELAMKVGEAVHVLNHDTQSCNRVAANQWLVQFQQTHAAWDVATNILTSDRRHASNFELE 60

Query: 58  IFCSQTLRSKVQRDFEELPATAFRPLRDSLNNLLKKFHKGPPKVRTQISIAVAALAVHVP 117
            F +Q L+ K+Q +   L +     L ++L   +K+F  GPP++ TQI +A++AL + V 
Sbjct: 61  FFAAQILKRKIQNEGYLLQSGPKDALLNALLLAVKRFSSGPPQLLTQICLALSALVLQVV 120

Query: 118 AEDWGDGGIVKWLRDEMDSHPEYIPGFXXXXXXXXXXXXNYKIAARPERRR--QFEKELT 175
           A       +   LR+        I               N +I ++        + +EL 
Sbjct: 121 AHGNPIEQLFYSLRNLQSEENGNIAVLEMLTVLPEEVVDNQRIDSKINSLHISHYTQELL 180

Query: 176 SQLEVALNILT--------ACLAISELKEQVLEAFASWLR---LKHGIPGSVLSSHPLVL 224
           S   + L  L           +  +E   +VL    SW+R        PG+ L++HPL+ 
Sbjct: 181 SHTPMVLEFLLRQSEINFDGAVQHNERNRKVLRCLLSWVRAGCFSEISPGT-LAAHPLLN 239

Query: 225 TALSSLNSDLLSEASVNVILELIHYTAVANIDGVSANMPLIQVIVPQVMNLKAQLSDSTK 284
              +SL      + ++ V++EL     V   +GV       Q+++ +V  LK  L     
Sbjct: 240 FVFNSLQDSTSFDLAIEVLVEL-----VTKHEGVP------QILLCRVHYLKEVLLFPAL 288

Query: 285 DEEDVKAI---ARLFADMGDSYVELIATGSDESMLIVQALLEVASHP--EYDIASMTFNF 339
           +  D+K I   A L +++G +   LI   S ES+ +  ALL   + P  +++IA  T  F
Sbjct: 289 NRGDMKVIGGLACLLSEIGQAAPSLIVEASAESLAVTDALLSCVAFPSEDWEIADSTLQF 348

Query: 340 WHSLQLNLTKKESYI-SYGTEACIEAERNRRLQVFRPAYESLVSLVSYRVQ-----YPED 393
           W +L        SYI +   +    A+R     +F P + +L+  +  R Q     Y ++
Sbjct: 349 WSTL-------ASYILAIDVDG---AKRKHTEAIFSPVFSALLDSLLLRSQVDDSTYNDE 398

Query: 394 YQDLSYED-LKEFKQTKYAVADVLTDAASVLSGDATLRILYMKLLEAVSGHGNSEQKEWR 452
            + +   D L  F+     + ++L D   +L       I   K+    S   N     W+
Sbjct: 399 GRVIDLPDGLVHFRMN---LVELLVDICHLLGS----MIFTQKIFIGGSASSNLSLP-WK 450

Query: 453 PAEAALFCIRAISNYV----------SVVEAEVMPQIMAXXXXXXXXXXXXXTVCLTIGA 502
             E+ LF + + ++ +          +V++   M                  ++  TIG+
Sbjct: 451 EMESKLFALNSAADVIIQDGQHFDFSAVMQLVTMLSSKPSDGLKGFICIVYRSLADTIGS 510

Query: 503 YSKWLDSASCGVSILPSVLDILMNGMGTSEDCAAA 537
           YSKW+ +       L   L I ++   +S  CA+A
Sbjct: 511 YSKWISAFKDNFRPLLLFLAIGISEPLSSNACASA 545