Miyakogusa Predicted Gene

Lj0g3v0357719.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0357719.1 Non Characterized Hit- tr|I1JIX9|I1JIX9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.43088
PE,59.09,0,DUF702,Protein of unknown function DUF702; put_zinc_LRP1:
putative zinc finger domain, LRP1 t,Zinc
f,NODE_82132_length_1780_cov_20.250000.path2.1
         (328 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g089750.1 | lateral root primordium (LRP)-like protein | H...   257   1e-68
Medtr3g014660.1 | LRP1 carboxy-terminal domain protein | HC | ch...   189   3e-48
Medtr8g039110.1 | LRP1 carboxy-terminal domain protein | HC | ch...   187   2e-47
Medtr8g076620.1 | zinc finger, LRP1 type protein | HC | chr8:324...   144   2e-34
Medtr5g021130.1 | transcription factor, putative | HC | chr5:810...   128   7e-30
Medtr3g112510.1 | transcription factor, putative | LC | chr3:527...   122   5e-28
Medtr4g071110.1 | zinc finger, LRP1 type protein | LC | chr4:267...   104   1e-22
Medtr0363s0040.1 | zinc finger, LRP1 type protein, putative | HC...   100   2e-21
Medtr1g023230.1 | zinc finger, LRP1 type protein | HC | chr1:741...    90   4e-18
Medtr0105s0070.1 | zinc finger, LRP1 type protein, putative | HC...    60   2e-09

>Medtr5g089750.1 | lateral root primordium (LRP)-like protein | HC |
           chr5:39020566-39017917 | 20130731
          Length = 467

 Score =  257 bits (656), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 158/297 (53%), Positives = 185/297 (62%), Gaps = 41/297 (13%)

Query: 26  VFLVAPAS-----SFNHHSESLMPDPHLNSSNNPVTALGVGMIPLLGG------------ 68
           +F+VAP+S       N+H E+LM DPH   S NP TALGVG+IPLL              
Sbjct: 128 MFVVAPSSFHHHHHNNNHHEALMSDPH---SLNPATALGVGVIPLLTASPCLENENMLNS 184

Query: 69  -----GIQLWHDXXXXXXHEQN----YLKKH-ALVEHDNXXXXXXX----ITALVATSGG 114
                GIQ WH+       +Q+    YLKK    ++H N           +TA   +SGG
Sbjct: 185 RRNQQGIQFWHEQHHQQQQQQSPHSHYLKKQQGFLDHHNTSPTNLVHGGGLTASGTSSGG 244

Query: 115 GTATCQDCGNQAKKDCGHRRCRACCKSRGFDCPTHVKSTWVPAARRRER--QVMAERXXX 172
           GT TCQDCGNQAKKDC +RRCR CCKSRGFDCPTHVKSTWVPAARRRER           
Sbjct: 245 GTTTCQDCGNQAKKDCSNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERLSSTATTTVVA 304

Query: 173 XXXXXXXXXXXKKPRLVASQXXXXXXXXXXXXXXXXPPRSFETSSSHQDVSFKESLPRQV 232
                      KKPRL+ASQ                PPRSF+T+SSHQD  FK+S+P QV
Sbjct: 305 GGGSSGSTSGAKKPRLIASQTTSHTSTSNTT-----PPRSFDTTSSHQDAGFKDSMPGQV 359

Query: 233 RAPAVFKCVRVTAVDGGEDEFAYQAMVKIGGHLFKGLLYNQGVENRDGYPDLSELHL 289
           RAPAVFKCVRVT+VD G+DE+AYQA+VKIGGH+FKG LY+ GVENR+ YP+LSELHL
Sbjct: 360 RAPAVFKCVRVTSVDDGKDEYAYQAVVKIGGHVFKGFLYDHGVENREVYPNLSELHL 416


>Medtr3g014660.1 | LRP1 carboxy-terminal domain protein | HC |
           chr3:4203654-4198130 | 20130731
          Length = 329

 Score =  189 bits (480), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/316 (37%), Positives = 156/316 (49%), Gaps = 39/316 (12%)

Query: 20  MVGLRDVFLVAPASS---------FNHHSESLMPDPHLNSSNNPV-----TALGVGMIPL 65
           M+GLRD+ L+AP+ S          N +     P  H ++SN+ +      ++G G+ PL
Sbjct: 3   MLGLRDLVLIAPSPSSLQHHHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPL 62

Query: 66  LGGGIQLWHDXXXXXXHEQ------------------NYLKKHALVEHDNXXXXXXXITA 107
           L     +          ++                  N  KK  + E +N        + 
Sbjct: 63  LTATPCMPQQQSQNNEVQENPSNNNNFWNLRMCPEVVNLPKKGVITEEENHGKIAMMESE 122

Query: 108 LVATSGGGTATCQDCGNQAKKDCGHRRCRACCKSRGFDCPTHVKSTWVPAARRRERQVMA 167
                G     CQDCGN+AKKDC  RRCR CCK RG+DC TH+KSTW+P+ RRRER+V  
Sbjct: 123 ENGVYGSEYRVCQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRREREV-- 180

Query: 168 ERXXXXXXXXXXXXXXKKPRLVASQXXXXXXXXXXXXXXXXPPRSFETSSSHQDVSFKES 227
           E               ++  L+ S                 P +SF TSS HQD  FKE 
Sbjct: 181 EMFAGGGDGEGCSGVKRQKGLLGSSQNAAATSHSSNSNGTTP-KSFATSSCHQDAGFKEG 239

Query: 228 LPRQVRAPAVFKCVRVTAVDGGEDEFAYQAMVKIGGHLFKGLLYNQGVENRDGYPDLSEL 287
           LP  V APAVF+C RVTA+  GEDEFAY A V I GH+FKG LY+ GV+ ++  P +SEL
Sbjct: 240 LPGHVNAPAVFRCHRVTAIGNGEDEFAYLATVHISGHVFKGFLYDHGVDGKNPMPCVSEL 299

Query: 288 HLG----GRNGVSSSS 299
            LG    G+NG  SS+
Sbjct: 300 QLGNNCSGKNGECSSA 315


>Medtr8g039110.1 | LRP1 carboxy-terminal domain protein | HC |
           chr8:14512197-14513962 | 20130731
          Length = 327

 Score =  187 bits (474), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/299 (36%), Positives = 152/299 (50%), Gaps = 28/299 (9%)

Query: 19  DMVGLRDVFLVA--PASSFNHHSESLMPD--PHLNSSNNPVTALGVGMIPLLGGGI---- 70
           +M+GLRD+ L+A  P+S  N  ++++  D  P+L   ++   ++G+G+ PLL        
Sbjct: 2   NMLGLRDLVLIAQTPSSLHNQQNQTISSDHNPNLPLPSSSALSVGLGIFPLLTTTHPHHQ 61

Query: 71  ---------------QLWHDXXXXXXHEQNYLKKHALVEHDNXXXXXXXITALVATSGGG 115
                            W+                  VE ++       +  +     G 
Sbjct: 62  NPNNNNNNDNIHQDSNFWNLKMCQPQQVMMMNSSRKRVEEEDDDVRNKNL-MMGCEENGE 120

Query: 116 TATCQDCGNQAKKDCGHRRCRACCKSRGFDCPTHVKSTWVPAARRRERQVMAERXXXXXX 175
              CQDCGN+AKKDC ++RCR CCK RGFDC THVKSTW+PA+ RR+R ++         
Sbjct: 121 FRVCQDCGNRAKKDCSYKRCRTCCKGRGFDCSTHVKSTWIPASMRRDRSMVVAEGGDSDG 180

Query: 176 XXXXXXXXKKPRLVASQXXXXXXXXXXXXXXXXPPRSFE---TSSSHQDVSFKESLPRQV 232
                   +K  + +SQ                  RS     TSS HQD  FK++LPR V
Sbjct: 181 GASSGTKRQKILMTSSQNNVAANSHSSSSNAATRTRSLSLDITSSCHQDPGFKQTLPRYV 240

Query: 233 RAPAVFKCVRVTAVDGGEDEFAYQAMVKIGGHLFKGLLYNQGVENR-DGYPDLSELHLG 290
           RAPAVFKC RV+A+  GEDE AY A V I GH+FKG LY+QGV+++ +  P +SEL LG
Sbjct: 241 RAPAVFKCHRVSAIGNGEDELAYLATVNISGHVFKGFLYDQGVDDKNETMPCVSELQLG 299


>Medtr8g076620.1 | zinc finger, LRP1 type protein | HC |
           chr8:32482156-32484876 | 20130731
          Length = 331

 Score =  144 bits (362), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 77/183 (42%), Positives = 96/183 (52%), Gaps = 26/183 (14%)

Query: 94  EHDNXXXXXXXITALVATSGGGTATCQDCGNQAKKDCGHRRCRACCKSRGFDCPTHVKST 153
           EH +         A+ ++S     +CQDCGNQAKKDC H RCR CCKSRGF C THVKST
Sbjct: 96  EHQSSSRSAAFTMAMRSSSSAEGISCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKST 155

Query: 154 WVPAARRRERQVMAERXXXXXXXXXXXXXXKKPRLVASQXXXXXXXXXXXXXXXXPPRSF 213
           WVPA+RRRERQ                   K+PR                       R+F
Sbjct: 156 WVPASRRRERQ------QQLSSSPLQRDISKRPR--------------DGSNALVSTRNF 195

Query: 214 ETSSSHQDVSFKESLPRQVRAPAVFKCVRVTAVDGGEDEFAYQAMVKIGGHLFKGLLYNQ 273
            T         + + P  V +PA F+CVRV+++D  +D +AYQ  V IGGHLFKG+LY+ 
Sbjct: 196 HTGLE------EANFPAVVSSPAEFRCVRVSSIDDADDRYAYQTAVNIGGHLFKGILYDF 249

Query: 274 GVE 276
           G E
Sbjct: 250 GPE 252


>Medtr5g021130.1 | transcription factor, putative | HC |
           chr5:8100971-8103215 | 20130731
          Length = 323

 Score =  128 bits (322), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 72/163 (44%), Positives = 93/163 (57%), Gaps = 4/163 (2%)

Query: 112 SGGGTATCQDCGNQAKKDCGHRRCRACCKSRGFDCPTHVKSTWVPAARRRERQVMAERXX 171
           SG G+ +CQDCGNQAKKDC H RCR CCKSRGFDC THVKSTWVPAARRRERQ   ++  
Sbjct: 93  SGSGSISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPAARRRERQQQQQQQQ 152

Query: 172 XXXXXXXXXXXXKKPRLVASQXXXXXXXXXXXXXXXXPPRSFETSSSHQDVSFKESLPRQ 231
                         P+                        +  ++    +++F    P  
Sbjct: 153 LSAPKSFQQHGDIVPQNRHRDLNNNNSSLACTRLPTNRSLTLPSAGLLDEMNF----PAV 208

Query: 232 VRAPAVFKCVRVTAVDGGEDEFAYQAMVKIGGHLFKGLLYNQG 274
           V +PA F+CVRV++VD  E+E+AY   V IGGH+F+G+LY+ G
Sbjct: 209 VNSPAEFRCVRVSSVDENEEEYAYSTAVNIGGHVFRGILYDYG 251


>Medtr3g112510.1 | transcription factor, putative | LC |
           chr3:52767953-52766535 | 20130731
          Length = 294

 Score =  122 bits (306), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 87/165 (52%), Gaps = 19/165 (11%)

Query: 115 GTATCQDCGNQAKKDCGHRRCRACCKSRGFDCPTHVKSTWVPAARRRERQVMAERXXXXX 174
           G   CQDCGNQAKKDC H RCR CCKSRGF C THVKSTWVPAA+RRERQ          
Sbjct: 82  GGMNCQDCGNQAKKDCIHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQ---------- 131

Query: 175 XXXXXXXXXKKPRLVASQXXXXXXXXXXXXXXXXPPRSFETSSSHQDVSFKESLPRQVRA 234
                    ++  +   +                PP         Q        P +V +
Sbjct: 132 QHLSALPFRRRDHVDNYKRHTEINQGATSLPFPQPPIPTTGLELGQ-------FPPEVSS 184

Query: 235 PAV-FKCVRVTAVDGGEDE-FAYQAMVKIGGHLFKGLLYNQGVEN 277
           P V F+CVRV+++DG + E  AYQ  V IGGH+FKG+LY+QG  N
Sbjct: 185 PGVTFRCVRVSSLDGPDHEQCAYQTAVNIGGHVFKGILYDQGPPN 229


>Medtr4g071110.1 | zinc finger, LRP1 type protein | LC |
           chr4:26795870-26794245 | 20130731
          Length = 264

 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 75/156 (48%), Gaps = 35/156 (22%)

Query: 119 CQDCGNQAKKDCGHRRCRACCKSRGFDCPTHVKSTWVPAARRRERQVMAERXXXXXXXXX 178
           CQDCGNQAKKDC + RCR+CCK++GF+C TH++STW+PA RRR R               
Sbjct: 17  CQDCGNQAKKDCAYSRCRSCCKNKGFNCHTHIRSTWIPADRRRHRM-------------- 62

Query: 179 XXXXXKKPRLVASQXXXXXXXXXXXXXXXXPPRSFETSSSHQDVSFKESLPRQVRAPAVF 238
                                           +   T SS  +  F    P    +    
Sbjct: 63  -----------------DHPSDQHHLHEHKRHKQINTISSSDEFKF----PAVTSSMTTL 101

Query: 239 KCVRVTAVDGGEDEFAYQAMVKIGGHLFKGLLYNQG 274
            CV+V ++D   +E AYQ  V+IGGH+F G+LY+QG
Sbjct: 102 TCVQVRSMDETVNETAYQTSVEIGGHVFSGILYDQG 137


>Medtr0363s0040.1 | zinc finger, LRP1 type protein, putative | HC |
           scaffold0363:17438-16319 | 20130731
          Length = 245

 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 87/174 (50%), Gaps = 25/174 (14%)

Query: 19  DMVGLRDVFLVA--PASSFNHHSESLMPD--PHLNSSNNPVTALGVGMIPLLGGGI---- 70
           +M+GLRD+ L+A  P+S  N  ++++  D  P+L   ++   ++G+G+ PLL        
Sbjct: 2   NMLGLRDLVLIAQTPSSLHNQQNQTISSDHNPNLPLPSSSALSVGLGIFPLLTTTHPHHQ 61

Query: 71  ---------------QLWHDXXXXXXHEQNYLKKHALVEHDNXXXXXXXITALVATSGGG 115
                            W+                  VE ++       +  +     G 
Sbjct: 62  NPNNNNNNDNIHQDSNFWNLKMCQPQQVMMMNSSRKRVEEEDDDVRNKNL-MMGCEENGE 120

Query: 116 TATCQDCGNQAKKDCGHRRCRACCKSRGFDCPTHVKSTWVPAARRRER-QVMAE 168
              CQDCGN+AKKDC ++RCR CCK RGFDC THVKSTW+PA+ RR+R  V+AE
Sbjct: 121 FRVCQDCGNRAKKDCSYKRCRTCCKGRGFDCSTHVKSTWIPASMRRDRSMVVAE 174


>Medtr1g023230.1 | zinc finger, LRP1 type protein | HC |
           chr1:7419015-7417436 | 20130731
          Length = 252

 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 39/45 (86%), Positives = 40/45 (88%)

Query: 119 CQDCGNQAKKDCGHRRCRACCKSRGFDCPTHVKSTWVPAARRRER 163
           CQDCGNQAKKDC H RCR CCKSRGF C THVKSTWVPAA+RRER
Sbjct: 122 CQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRER 166


>Medtr0105s0070.1 | zinc finger, LRP1 type protein, putative | HC |
           scaffold0105:24983-22116 | 20130731
          Length = 86

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/33 (63%), Positives = 29/33 (87%)

Query: 121 DCGNQAKKDCGHRRCRACCKSRGFDCPTHVKST 153
           DCGNQAKKDC + RCR+CCK++ F+C TH+K++
Sbjct: 44  DCGNQAKKDCAYSRCRSCCKNKDFNCHTHIKTS 76