Miyakogusa Predicted Gene

Lj0g3v0357619.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0357619.1 Non Characterized Hit- tr|I1N6P3|I1N6P3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.47847
PE,59.26,0.000000000001,zf-4CXXC_R1,Zinc-finger domain of
monoamine-oxidase A repressor R1,CUFF.24609.1
         (92 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0024s0330.1 | zinc-finger of monoamine-oxidase A repressor ...    85   1e-17
Medtr6g017265.1 | zinc-finger of monoamine-oxidase A repressor R...    81   2e-16
Medtr5g018400.1 | zinc-finger of monoamine-oxidase A repressor R...    46   8e-06

>Medtr0024s0330.1 | zinc-finger of monoamine-oxidase A repressor R1
           | LC | scaffold0024:150614-158393 | 20130731
          Length = 735

 Score = 85.1 bits (209), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/62 (59%), Positives = 44/62 (70%), Gaps = 2/62 (3%)

Query: 15  ECRRKIQ--GVAPSNLRNGKPCEIRFCRLCLSIRYGEEAPQVVLLDDWSCPKCRGKCNCS 72
           +CR+K +    A  N R GKPC+IRFC  CL  RYGE+A +V LL+DW CPKCRG CNCS
Sbjct: 48  QCRQKTRDFSAACKNPRTGKPCQIRFCHKCLLNRYGEKAEEVELLNDWMCPKCRGICNCS 107

Query: 73  TC 74
            C
Sbjct: 108 FC 109


>Medtr6g017265.1 | zinc-finger of monoamine-oxidase A repressor R1 |
           HC | chr6:6917300-6911610 | 20130731
          Length = 634

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/65 (56%), Positives = 44/65 (67%), Gaps = 2/65 (3%)

Query: 15  ECRRKIQ--GVAPSNLRNGKPCEIRFCRLCLSIRYGEEAPQVVLLDDWSCPKCRGKCNCS 72
           +CR+K      A  N R GKPC IRFC  CL  RYGE+A +V LL+DW+CPKC+G CNCS
Sbjct: 57  QCRQKTMDFSAACKNPRGGKPCVIRFCHKCLLNRYGEKAEEVDLLNDWNCPKCKGICNCS 116

Query: 73  TCRIN 77
            C  N
Sbjct: 117 RCMKN 121


>Medtr5g018400.1 | zinc-finger of monoamine-oxidase A repressor R1 |
           HC | chr5:6858343-6862565 | 20130731
          Length = 385

 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 25/39 (64%)

Query: 37  RFCRLCLSIRYGEEAPQVVLLDDWSCPKCRGKCNCSTCR 75
           +FC  CL +RYGE   + +    W CP+CRG CNCS CR
Sbjct: 188 QFCGDCLYMRYGEHVIEALADPTWKCPRCRGICNCSLCR 226