Miyakogusa Predicted Gene

Lj0g3v0357579.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0357579.1 Non Characterized Hit- tr|I1M6N5|I1M6N5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,97.54,0,PYRUVATE
DEHYDROGENASE E1 COMPONENT, BETA SUBUNIT,NULL; DEHYDROGENASE
RELATED,NULL; Transketolase_C,,CUFF.24794.1
         (122 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g005380.2 | pyruvate dehydrogenase E1 beta subunit | HC | ...   229   4e-61
Medtr7g005380.1 | pyruvate dehydrogenase E1 beta subunit | HC | ...   229   4e-61
Medtr3g076630.1 | pyruvate dehydrogenase E1 beta subunit | HC | ...    91   2e-19
Medtr4g021470.1 | branched chain alpha-keto acid dehydrogenase E...    77   4e-15

>Medtr7g005380.2 | pyruvate dehydrogenase E1 beta subunit | HC |
           chr7:85481-92086 | 20130731
          Length = 361

 Score =  229 bits (584), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 111/122 (90%), Positives = 117/122 (95%)

Query: 1   MVGYALKAAEILAKEGISAEVINLRSIRPLDRSTINTSVRKTNRLVTVEEGFPQHGVGAE 60
           MVG+ALKAAE L KEGISAEVINLRSIRPLDR+TIN SVRKTNRLVTVEEGFPQHGVGAE
Sbjct: 240 MVGFALKAAETLEKEGISAEVINLRSIRPLDRATINASVRKTNRLVTVEEGFPQHGVGAE 299

Query: 61  ICTSVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRSVPLAA 120
           IC SVIEESFGYLDAPVERIAGADVPMPYAANLER+AVPQ+EDIVRAAKRAC+RSVP+AA
Sbjct: 300 ICASVIEESFGYLDAPVERIAGADVPMPYAANLERLAVPQIEDIVRAAKRACHRSVPMAA 359

Query: 121 AA 122
            A
Sbjct: 360 TA 361


>Medtr7g005380.1 | pyruvate dehydrogenase E1 beta subunit | HC |
           chr7:86084-92086 | 20130731
          Length = 361

 Score =  229 bits (584), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 111/122 (90%), Positives = 117/122 (95%)

Query: 1   MVGYALKAAEILAKEGISAEVINLRSIRPLDRSTINTSVRKTNRLVTVEEGFPQHGVGAE 60
           MVG+ALKAAE L KEGISAEVINLRSIRPLDR+TIN SVRKTNRLVTVEEGFPQHGVGAE
Sbjct: 240 MVGFALKAAETLEKEGISAEVINLRSIRPLDRATINASVRKTNRLVTVEEGFPQHGVGAE 299

Query: 61  ICTSVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRSVPLAA 120
           IC SVIEESFGYLDAPVERIAGADVPMPYAANLER+AVPQ+EDIVRAAKRAC+RSVP+AA
Sbjct: 300 ICASVIEESFGYLDAPVERIAGADVPMPYAANLERLAVPQIEDIVRAAKRACHRSVPMAA 359

Query: 121 AA 122
            A
Sbjct: 360 TA 361


>Medtr3g076630.1 | pyruvate dehydrogenase E1 beta subunit | HC |
           chr3:34442945-34446106 | 20130731
          Length = 403

 Score = 90.9 bits (224), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 66/109 (60%)

Query: 4   YALKAAEILAKEGISAEVINLRSIRPLDRSTINTSVRKTNRLVTVEEGFPQHGVGAEICT 63
           + ++AA+ L  +G   EVI++RS++P D  TI  S++KT+R++ VEE     G+GA +  
Sbjct: 294 HVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLTA 353

Query: 64  SVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRAC 112
           ++ E    YLDAP+  ++  DVP PYA  LE   V Q   IV A ++ C
Sbjct: 354 AITENFHDYLDAPIICLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLC 402


>Medtr4g021470.1 | branched chain alpha-keto acid dehydrogenase E1
           beta subunit | HC | chr4:6990880-6984927 | 20130731
          Length = 358

 Score = 76.6 bits (187), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 2/96 (2%)

Query: 14  KEGISAEVINLRSIRPLDRSTINTSVRKTNRLVTVEEGFPQHGVGAEICTSVIEESFGYL 73
           KEGIS E+I+L+++ P D+ T+  SV+KT RL+   E     G GAEI  S++E  F  L
Sbjct: 260 KEGISCELIDLKTLIPWDKETVEASVKKTGRLLISHEAPVTGGFGAEISASILERCFSRL 319

Query: 74  DAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 109
           +APV R+ G D P P     E   +P    I+ A K
Sbjct: 320 EAPVARVCGLDTPFPLV--FEPFYMPTKNKILDAIK 353