Miyakogusa Predicted Gene

Lj0g3v0357479.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0357479.1 tr|G7KNJ9|G7KNJ9_MEDTR Nudix hydrolase
OS=Medicago truncatula GN=MTR_6g086510 PE=4 SV=1,84.12,0,NUDIX,NUDIX
hydrolase domain; Nudix,NUDIX hydrolase domain-like; no
description,NUDIX hydrolase doma,CUFF.24601.1
         (165 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g086510.1 | nudix hydrolase-like protein | HC | chr6:32141...   303   6e-83

>Medtr6g086510.1 | nudix hydrolase-like protein | HC |
           chr6:32141269-32135727 | 20130731
          Length = 386

 Score =  303 bits (775), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 142/165 (86%), Positives = 154/165 (93%)

Query: 1   MCGYVELDGQKHLWVAKRSHMKPTYPGMLDHLVAGGLPHGIDCRENVVKECEEEAGIPRT 60
           M GYVE+DGQKHLW+AKRSH K TYPGMLDHLVAGGLPHGIDC+ENVVKECEEEAGIPR+
Sbjct: 222 MNGYVEIDGQKHLWIAKRSHTKSTYPGMLDHLVAGGLPHGIDCQENVVKECEEEAGIPRS 281

Query: 61  ISMKALPVGAVSYMDIDGYSYKRDVLFCYDLKLPESFVPENEDGEVDSFKLIPVKQVAEV 120
           IS++A  VGAVSYMDIDG  YKRDVLFCYDLKLPESFVP+NEDGEV+SFKLIPVKQVAE+
Sbjct: 282 ISIRANAVGAVSYMDIDGDRYKRDVLFCYDLKLPESFVPKNEDGEVESFKLIPVKQVAEI 341

Query: 121 IRTTQLFKPNCSLVIIDFLFRHGYISPEYHGYLDLLRSLRTGDCS 165
           IR TQ FKPNC++VIIDFLFRHGYISPE +GYLDLLRSLR GDCS
Sbjct: 342 IRKTQFFKPNCAIVIIDFLFRHGYISPENYGYLDLLRSLRIGDCS 386