Miyakogusa Predicted Gene

Lj0g3v0357329.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0357329.1 tr|B9I9G4|B9I9G4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_572587 PE=4
SV=1,44.2,5e-19,seg,NULL,CUFF.24592.1
         (238 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g033650.1 | transmembrane protein, putative | HC | chr2:12...   181   7e-46
Medtr2g033650.2 | transmembrane protein, putative | HC | chr2:12...   181   7e-46
Medtr4g122710.1 | transmembrane protein, putative | HC | chr4:50...   127   7e-30
Medtr1g086670.1 | transmembrane protein, putative | HC | chr1:38...    63   2e-10
Medtr1g086670.2 | transmembrane protein, putative | HC | chr1:38...    63   2e-10

>Medtr2g033650.1 | transmembrane protein, putative | HC |
           chr2:12806283-12802975 | 20130731
          Length = 224

 Score =  181 bits (458), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 112/239 (46%), Positives = 140/239 (58%), Gaps = 18/239 (7%)

Query: 1   MDRRSARDKDIEVDIESGLPLIENDSKKVNSPSTSKQGKTLFGKSSGGPSLYCNEANLSE 60
           MD+RS R+KDIEVD+ESGLPLIE++S++++  S    G ++ G++   PS Y NE+NLSE
Sbjct: 1   MDQRSGREKDIEVDLESGLPLIEDNSRRISIISGGFVGGSVNGEAR--PSSYLNESNLSE 58

Query: 61  VSVDLMNATNKAMSVQDSANHAEKIMVXXXXXXXXXXXXXXXXXXXQGPSLDAADHKLIR 120
           VSV++M   NKA + +     + K                      QGPSLDAADHKLI+
Sbjct: 59  VSVNMMKVVNKAPAKEKRKKASGK-------------KAAKPPRPPQGPSLDAADHKLIK 105

Query: 121 EISQLAMLKRARVERXXXXXXXXXXXXXXXXXXXX--XXXVFTAIFCIVIIFQXXXXXXX 178
           E+S+LAMLKRAR+ER                         VFT IF IVII Q       
Sbjct: 106 EMSELAMLKRARIERMKALKKMRTAKSSTPSSNSSSIVAMVFTVIFFIVIICQGMSSTGK 165

Query: 179 XXXXX-XXXPLSTGGAEGDLISVQYQLNPSSDPNAPGSESHNFVQKVAGSDFPEELRKD 236
                    P+S GG E  LISVQYQLNPSSD NAPGSES NFVQ+V+GSD  E+LR+D
Sbjct: 166 SSVSSFQGSPVSAGGTEEGLISVQYQLNPSSDSNAPGSESINFVQRVSGSDLHEKLRRD 224


>Medtr2g033650.2 | transmembrane protein, putative | HC |
           chr2:12805524-12802975 | 20130731
          Length = 224

 Score =  181 bits (458), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 112/239 (46%), Positives = 140/239 (58%), Gaps = 18/239 (7%)

Query: 1   MDRRSARDKDIEVDIESGLPLIENDSKKVNSPSTSKQGKTLFGKSSGGPSLYCNEANLSE 60
           MD+RS R+KDIEVD+ESGLPLIE++S++++  S    G ++ G++   PS Y NE+NLSE
Sbjct: 1   MDQRSGREKDIEVDLESGLPLIEDNSRRISIISGGFVGGSVNGEAR--PSSYLNESNLSE 58

Query: 61  VSVDLMNATNKAMSVQDSANHAEKIMVXXXXXXXXXXXXXXXXXXXQGPSLDAADHKLIR 120
           VSV++M   NKA + +     + K                      QGPSLDAADHKLI+
Sbjct: 59  VSVNMMKVVNKAPAKEKRKKASGK-------------KAAKPPRPPQGPSLDAADHKLIK 105

Query: 121 EISQLAMLKRARVERXXXXXXXXXXXXXXXXXXXX--XXXVFTAIFCIVIIFQXXXXXXX 178
           E+S+LAMLKRAR+ER                         VFT IF IVII Q       
Sbjct: 106 EMSELAMLKRARIERMKALKKMRTAKSSTPSSNSSSIVAMVFTVIFFIVIICQGMSSTGK 165

Query: 179 XXXXX-XXXPLSTGGAEGDLISVQYQLNPSSDPNAPGSESHNFVQKVAGSDFPEELRKD 236
                    P+S GG E  LISVQYQLNPSSD NAPGSES NFVQ+V+GSD  E+LR+D
Sbjct: 166 SSVSSFQGSPVSAGGTEEGLISVQYQLNPSSDSNAPGSESINFVQRVSGSDLHEKLRRD 224


>Medtr4g122710.1 | transmembrane protein, putative | HC |
           chr4:50611308-50612706 | 20130731
          Length = 241

 Score =  127 bits (320), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 96/250 (38%), Positives = 121/250 (48%), Gaps = 25/250 (10%)

Query: 1   MDRRSARDKDIEVDIESGLPLIENDSKKVNSPSTSKQGKTLFGKSSGG------------ 48
           MD R+ + +  EVDIESGL + ++DS        +KQ +TLF K   G            
Sbjct: 1   MDDRNMKGEGGEVDIESGLVVTKDDS------GNTKQERTLFAKIYCGIVGDSIKVEERN 54

Query: 49  PSLYCNEANLSEVSVDLMNATNKAMSVQDSANHAEKIMVXXXXXXXXXXXXXXXXXXXQG 108
             LY  ++NLS  SV+++  TNK ++ QD     E   V                   +G
Sbjct: 55  SVLYLKDSNLSGDSVNMVKETNKLLTGQDLVKSVENSPVKEKRKKSSNKKAAKPPRAPRG 114

Query: 109 PSLDAADHKLIREISQLAMLKRARVERXXXXXXXXXXXXXXXXXXXXXXXVFTAIFCIVI 168
           PSLDAAD KLIREI+QLAMLKRARVER                       V T +FCIVI
Sbjct: 115 PSLDAADQKLIREITQLAMLKRARVERMKALKKMKAAKASSSPSSSMFAMVCTVVFCIVI 174

Query: 169 IFQXXXXXXXXXXXX-XXXPLSTGGAEGDLISV--QYQLNP-SSDPNAPGSESHNFVQKV 224
           +FQ                P+S GGAEGDLI+V  Q+QLN  S   +AP SESH  V+  
Sbjct: 175 LFQGISSSGKSSVTSFQGSPVSAGGAEGDLIAVQLQHQLNQISIQQHAPSSESHKIVR-- 232

Query: 225 AGSDFPEELR 234
            GS    +LR
Sbjct: 233 -GSYLSRKLR 241


>Medtr1g086670.1 | transmembrane protein, putative | HC |
           chr1:38810623-38806330 | 20130731
          Length = 267

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 95/228 (41%), Gaps = 27/228 (11%)

Query: 7   RDKDIEVDIESGLPLIE----NDSKKVNSPST-------------SKQGKTLFGKSSGGP 49
           ++K++E DIESG    E    ND +  NS +              S++GK     S    
Sbjct: 40  KEKEVEFDIESGENTSEEDTSNDERDSNSKNGFPWSWNGVMNLDGSEKGKNGIEASCSSS 99

Query: 50  SLYCNEANLSEVSVDLMNATNKAMSVQDSANHAEKIMVXXXXXXXXXXXXXXXXXXXQGP 109
           S +C+   + E +++L+   +K +   +  +  +KI                     +GP
Sbjct: 100 SNFCDVVGVDECNLELL--VDKGLEHVNGNHGKQKIKFTNPRKPQKPPLPP------RGP 151

Query: 110 SLDAADHKLIREISQLAMLKRARVERXXXXXXXXXXXX-XXXXXXXXXXXVFTAIFCIVI 168
           SLDA DHK ++E+++LA+ KRAR+++                        V T  F +VI
Sbjct: 152 SLDAGDHKFVKELAELALRKRARIKKMNAVKKMKASKLPSSSTYTNLSAMVITIFFFLVI 211

Query: 169 IFQXXXXXXXXXXXXXXXPLSTGGAEGDLISVQYQLN-PSSDPNAPGS 215
           IF                P S   ++  LISVQY  N  +S+ + PGS
Sbjct: 212 IFHGIKSASSASVGLTASPESAVASDEGLISVQYPTNFNTSNGDEPGS 259


>Medtr1g086670.2 | transmembrane protein, putative | HC |
           chr1:38809270-38806055 | 20130731
          Length = 236

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 95/228 (41%), Gaps = 27/228 (11%)

Query: 7   RDKDIEVDIESGLPLIE----NDSKKVNSPST-------------SKQGKTLFGKSSGGP 49
           ++K++E DIESG    E    ND +  NS +              S++GK     S    
Sbjct: 9   KEKEVEFDIESGENTSEEDTSNDERDSNSKNGFPWSWNGVMNLDGSEKGKNGIEASCSSS 68

Query: 50  SLYCNEANLSEVSVDLMNATNKAMSVQDSANHAEKIMVXXXXXXXXXXXXXXXXXXXQGP 109
           S +C+   + E +++L+   +K +   +  +  +KI                     +GP
Sbjct: 69  SNFCDVVGVDECNLELL--VDKGLEHVNGNHGKQKIKFTNPRKPQKPPLPP------RGP 120

Query: 110 SLDAADHKLIREISQLAMLKRARVERXXXXXXXXXXXX-XXXXXXXXXXXVFTAIFCIVI 168
           SLDA DHK ++E+++LA+ KRAR+++                        V T  F +VI
Sbjct: 121 SLDAGDHKFVKELAELALRKRARIKKMNAVKKMKASKLPSSSTYTNLSAMVITIFFFLVI 180

Query: 169 IFQXXXXXXXXXXXXXXXPLSTGGAEGDLISVQYQLN-PSSDPNAPGS 215
           IF                P S   ++  LISVQY  N  +S+ + PGS
Sbjct: 181 IFHGIKSASSASVGLTASPESAVASDEGLISVQYPTNFNTSNGDEPGS 228