Miyakogusa Predicted Gene
- Lj0g3v0356829.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0356829.1 CUFF.24565.1
(222 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr0562s0010.1 | PRA1 (prenylated RAB acceptor) family protein... 296 7e-81
Medtr4g014060.1 | PRA1 (prenylated RAB acceptor) family protein ... 296 7e-81
Medtr5g083490.1 | PRA1 (prenylated RAB acceptor) family protein ... 233 1e-61
Medtr5g083490.2 | PRA1 (prenylated RAB acceptor) family protein ... 233 1e-61
Medtr7g096220.1 | PRA1 family protein | HC | chr7:38592570-38591... 108 5e-24
Medtr3g031070.1 | PRA1 family protein | LC | chr3:26884581-26883... 105 4e-23
Medtr1g070480.1 | PRA1 family protein | HC | chr1:31282735-31283... 100 2e-21
Medtr2g100270.1 | PRA1 (prenylated RAB acceptor) family protein ... 93 2e-19
Medtr2g100260.1 | PRA1 (prenylated RAB acceptor) family protein ... 90 2e-18
Medtr6g092690.1 | PRA1 (prenylated RAB acceptor) family protein ... 82 3e-16
Medtr8g016150.1 | PRA1 family protein | HC | chr8:5396635-539578... 79 4e-15
Medtr1g080760.1 | PRA1 (prenylated RAB acceptor) family protein ... 72 4e-13
Medtr1g080760.3 | PRA1 (prenylated RAB acceptor) family protein ... 72 4e-13
Medtr1g080760.2 | PRA1 (prenylated RAB acceptor) family protein ... 72 4e-13
Medtr1g093090.1 | PRA1 family protein | HC | chr1:33781981-33782... 65 5e-11
>Medtr0562s0010.1 | PRA1 (prenylated RAB acceptor) family protein |
HC | scaffold0562:30-710 | 20130731
Length = 226
Score = 296 bits (759), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 152/179 (84%)
Query: 27 DAPATSPAFRALINNLSESLRNGLSQRRPWSELTDRSAFSKPESFSDATLRVRKNFSYFR 86
D P SPA R LINNLSESLRNGL+QRRPW+EL DRSAFSKPESFSDATLRVRKN+SYFR
Sbjct: 33 DVPVNSPAVRVLINNLSESLRNGLAQRRPWTELVDRSAFSKPESFSDATLRVRKNYSYFR 92
Query: 87 INYYXXXXXXXXXXXXTNPFSLITLTGLLASWTFLYLFRPADRPLVLFGRTFTDFETLAI 146
+NYY TNPFSLI L GLLASWTFLYLFRP DRPLVLFGRTFTDFETL I
Sbjct: 93 VNYYAVVAGILAVSLLTNPFSLILLIGLLASWTFLYLFRPTDRPLVLFGRTFTDFETLMI 152
Query: 147 LSALTIFVVFLTSVGSVLVSALMLGVAFVCLHGAFRVPEDLFLDEQEPSQTTGFLSFLR 205
LS LTIFVVFLTSVGSVLVSALMLGV+ VCLHGAFR PEDLFLDEQ+ SQ TGFLSFLR
Sbjct: 153 LSGLTIFVVFLTSVGSVLVSALMLGVSVVCLHGAFRAPEDLFLDEQDNSQATGFLSFLR 211
>Medtr4g014060.1 | PRA1 (prenylated RAB acceptor) family protein |
HC | chr4:3898587-3900131 | 20130731
Length = 226
Score = 296 bits (759), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 146/179 (81%), Positives = 152/179 (84%)
Query: 27 DAPATSPAFRALINNLSESLRNGLSQRRPWSELTDRSAFSKPESFSDATLRVRKNFSYFR 86
D P SPA R LINNLSESLRNGL+QRRPW+EL DRSAFSKPESFSDATLRVRKN+SYFR
Sbjct: 33 DVPVNSPAVRVLINNLSESLRNGLAQRRPWTELVDRSAFSKPESFSDATLRVRKNYSYFR 92
Query: 87 INYYXXXXXXXXXXXXTNPFSLITLTGLLASWTFLYLFRPADRPLVLFGRTFTDFETLAI 146
+NYY TNPFSLI L GLLASWTFLYLFRP DRPLVLFGRTFTDFETL I
Sbjct: 93 VNYYAVVAGILAVSLLTNPFSLILLIGLLASWTFLYLFRPTDRPLVLFGRTFTDFETLMI 152
Query: 147 LSALTIFVVFLTSVGSVLVSALMLGVAFVCLHGAFRVPEDLFLDEQEPSQTTGFLSFLR 205
LS LTIFVVFLTSVGSVLVSALMLGV+ VCLHGAFR PEDLFLDEQ+ SQ TGFLSFLR
Sbjct: 153 LSGLTIFVVFLTSVGSVLVSALMLGVSVVCLHGAFRAPEDLFLDEQDNSQATGFLSFLR 211
>Medtr5g083490.1 | PRA1 (prenylated RAB acceptor) family protein |
HC | chr5:36034293-36033649 | 20130731
Length = 214
Score = 233 bits (593), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/201 (60%), Positives = 151/201 (75%), Gaps = 1/201 (0%)
Query: 4 TAPPVLPVSNTPPASTTVASAGSDAPATSPAFRALINNLSESLRNGLSQRRPWSELTDRS 63
++PP LPVS + + ++ S P +PAFRA I+ +S SLR SQRRPWSEL DRS
Sbjct: 2 SSPPTLPVSTSQSTISNTSTTQSQPPIATPAFRAFISRISSSLRQAFSQRRPWSELIDRS 61
Query: 64 AFSKPESFSDATLRVRKNFSYFRINYYXXXXXXXXXXXXTNPFSLITLTGLLASWTFLYL 123
+ S+PE+ ++A R+RKNF+YFR+NY T+PFSL+ L GLLASW+FLYL
Sbjct: 62 SISRPETLAEAYSRIRKNFTYFRVNYLTLIIFALAVSLITHPFSLLVLLGLLASWSFLYL 121
Query: 124 FRPADRPLVLFGRTFTDFETLAILSALTIFVVFLTSVGSVLVSALMLGVAFVCLHGAFRV 183
FRP+D+PLVLFGRTF D ETL IL LTIFVVFLT+VGS+L+SALM+G+A V HGAFRV
Sbjct: 122 FRPSDQPLVLFGRTFADRETLGILVVLTIFVVFLTTVGSLLISALMVGLAIVSAHGAFRV 181
Query: 184 PEDLFLDEQEPSQTTGFLSFL 204
PEDLFLD+QE S ++GFLSFL
Sbjct: 182 PEDLFLDDQEVS-SSGFLSFL 201
>Medtr5g083490.2 | PRA1 (prenylated RAB acceptor) family protein |
HC | chr5:36034293-36033649 | 20130731
Length = 214
Score = 233 bits (593), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/201 (60%), Positives = 151/201 (75%), Gaps = 1/201 (0%)
Query: 4 TAPPVLPVSNTPPASTTVASAGSDAPATSPAFRALINNLSESLRNGLSQRRPWSELTDRS 63
++PP LPVS + + ++ S P +PAFRA I+ +S SLR SQRRPWSEL DRS
Sbjct: 2 SSPPTLPVSTSQSTISNTSTTQSQPPIATPAFRAFISRISSSLRQAFSQRRPWSELIDRS 61
Query: 64 AFSKPESFSDATLRVRKNFSYFRINYYXXXXXXXXXXXXTNPFSLITLTGLLASWTFLYL 123
+ S+PE+ ++A R+RKNF+YFR+NY T+PFSL+ L GLLASW+FLYL
Sbjct: 62 SISRPETLAEAYSRIRKNFTYFRVNYLTLIIFALAVSLITHPFSLLVLLGLLASWSFLYL 121
Query: 124 FRPADRPLVLFGRTFTDFETLAILSALTIFVVFLTSVGSVLVSALMLGVAFVCLHGAFRV 183
FRP+D+PLVLFGRTF D ETL IL LTIFVVFLT+VGS+L+SALM+G+A V HGAFRV
Sbjct: 122 FRPSDQPLVLFGRTFADRETLGILVVLTIFVVFLTTVGSLLISALMVGLAIVSAHGAFRV 181
Query: 184 PEDLFLDEQEPSQTTGFLSFL 204
PEDLFLD+QE S ++GFLSFL
Sbjct: 182 PEDLFLDDQEVS-SSGFLSFL 201
>Medtr7g096220.1 | PRA1 family protein | HC | chr7:38592570-38591375
| 20130731
Length = 201
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 2/143 (1%)
Query: 51 SQRRPWSELTDRSAFSKPESFSDATLRVRKNFSYFRINYYXXXXXXXXXXXXTNPFSLIT 110
+ RRPW E+ +F++P S ++AT RV+ N ++FR+NY +P S+I
Sbjct: 36 ATRRPWEEVFALYSFTRPYSLTEATSRVKCNINHFRVNYIILILFVLFLSLLWHPISIIV 95
Query: 111 LTGLLASWTFLYLFRPADRPLVLFGRTFTDFETLAILSALTIFVVFLTSVGSVLVSALML 170
L +W FLY FR D P+VLFG D + A+L+ +TI + T V ++ ++ +
Sbjct: 96 FLITLIAWFFLYFFR--DEPIVLFGHVVDDRASAAVLAVVTIVALGFTGVWVNVLVSIAV 153
Query: 171 GVAFVCLHGAFRVPEDLFLDEQE 193
GV V LHGAFR EDL++DE E
Sbjct: 154 GVVIVVLHGAFRSTEDLYVDEHE 176
>Medtr3g031070.1 | PRA1 family protein | LC | chr3:26884581-26883975
| 20130731
Length = 197
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 98/174 (56%), Gaps = 5/174 (2%)
Query: 21 VASAGSDAPATSPAFRALINNLSESLRNGLSQRRPWSELTDRSAFSKPESFSDATLRVRK 80
++S P RA + NL + RR W+EL DRS S PES ++A R+RK
Sbjct: 1 MSSEKLRVPIAITTLRASLMNLHHHV-----HRRQWTELIDRSTISIPESLTEAFFRIRK 55
Query: 81 NFSYFRINYYXXXXXXXXXXXXTNPFSLITLTGLLASWTFLYLFRPADRPLVLFGRTFTD 140
N YFRINY + P SL+ L L +W FLY+ R ++ LV+ R F+
Sbjct: 56 NIYYFRINYIIVLTLVLAAFLLSRPLSLLLLISLAGAWLFLYILRAPEKKLVILDRVFSK 115
Query: 141 FETLAILSALTIFVVFLTSVGSVLVSALMLGVAFVCLHGAFRVPEDLFLDEQEP 194
E L +L T+ VV +TS+ SV+V A+M+GV VC HGA VPEDLFL++QEP
Sbjct: 116 NELLVVLIVATVVVVVVTSIVSVIVYAVMVGVGIVCAHGAICVPEDLFLEQQEP 169
>Medtr1g070480.1 | PRA1 family protein | HC | chr1:31282735-31283563
| 20130731
Length = 193
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 53 RRPWSELTDRSAFSKPESFSDATLRVRKNFSYFRINYYXXXXXXXXXXXXTNPFSLITLT 112
RRPW +F+ P S + TLR+++N ++FRINY +P SLI
Sbjct: 31 RRPWQNFFSPQSFTLPHSLFETTLRIKRNLNHFRINYAIIILFILFLSLLYHPLSLIVFL 90
Query: 113 GLLASWTFLYLFRPADRPLVLFGRTFTDFETLAILSALTIFVVFLTSVGSVLVSALMLGV 172
+ A W L+ FR DRP+VLF T D L +LS LTI + T V ++ ++++G
Sbjct: 91 VVFAVWFLLFFFR--DRPVVLFRFTIDDRFLLVLLSTLTIVALVFTGVWLNVLVSVLVGS 148
Query: 173 AFVCLHGAFRVPEDLFLDEQE 193
A V LH AFR +DL+LDE+E
Sbjct: 149 AVVVLHAAFRSIDDLYLDEEE 169
>Medtr2g100270.1 | PRA1 (prenylated RAB acceptor) family protein |
HC | chr2:43061479-43062573 | 20130731
Length = 185
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 93/168 (55%), Gaps = 5/168 (2%)
Query: 26 SDAPATSPAFRALINNLSESLRNGLSQRRPWSELTDRSAFSKPESFSDATLRVRKNFSYF 85
S PAT+ F I + L++GL RRPW L + +F+ P +F DA R++ N S+F
Sbjct: 11 SSPPATNLEF---ITRAKDRLKSGLGTRRPWKLLVNLRSFNLPSNFHDAISRIKTNISFF 67
Query: 86 RINYYXXXXXXXXXXXXTNPFSLITLTGLLASWTFLYLFRPADRPLVLFGRTFTDFETLA 145
++NY +P SLI L+A+W FLY R D P+V+FGR +D L
Sbjct: 68 QMNYAIILLIILFLSLLWHPISLIVFVVLIAAWLFLYFLR--DEPIVIFGRLISDRVILV 125
Query: 146 ILSALTIFVVFLTSVGSVLVSALMLGVAFVCLHGAFRVPEDLFLDEQE 193
++ LT+ ++ LT ++ A+ +GV + LH AFR DLFLDE+E
Sbjct: 126 LMLILTVGLLLLTGAILNILIAVAVGVVVILLHAAFRNTSDLFLDEEE 173
>Medtr2g100260.1 | PRA1 (prenylated RAB acceptor) family protein |
HC | chr2:43059090-43060141 | 20130731
Length = 188
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 85/162 (52%), Gaps = 10/162 (6%)
Query: 38 LINNLSESLRNGLSQRRPWSELTDRSAFSKPESFSDATLRVRKNFSYFRINYYXXXXXXX 97
LI+ +ES++ + RRPW + +F+ P +F+DA R + N +F +NY
Sbjct: 21 LISRTNESIKFVIGTRRPWKLFFNVQSFNLPRNFNDAISRYKINICFFEMNYTIILVIIL 80
Query: 98 XXXXXTNPFSLITLTGLLASWTFLYLFRPADRPLVLFGRTFTDFETLAILSALT-IFVVF 156
+P SLI L+ASW FLY R D P +FGR +D + + LT +F++F
Sbjct: 81 FLSLLFHPTSLIVFLELMASWLFLYFLR--DEPFTVFGRLISDRVVVFPMLILTVVFILF 138
Query: 157 LTSVGSVLVSALMLGVAFVCLHGAFRVPE-----DLFLDEQE 193
+ ++ ++ V+ M V + LH AFR DLF+DE++
Sbjct: 139 IGTIFNIFVAVFMCVV--IVLHAAFRNTNDYSIADLFIDEED 178
>Medtr6g092690.1 | PRA1 (prenylated RAB acceptor) family protein |
HC | chr6:34903018-34902413 | 20130731
Length = 201
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 6/170 (3%)
Query: 26 SDAPAT--SPAFRALINNLSESLRNGLSQRRPWSELTDRSAFSKPESFSDATLRVRKNFS 83
SDA AT +P + E ++ + RPW E+ S F P SF D R+ N
Sbjct: 8 SDAEATPSNPNLHY-VTEAKERFQDNIGVTRPWKEMIQFSHFKLPSSFYDTIQRINTNAK 66
Query: 84 YFRINYYXXXXXXXXXXXXTNPFSLITLTGLLASWTFLYLFRPADRPLVLFGRTFTDFET 143
+FR NY +P SLI L ++ +W +LY R PLV+FG +
Sbjct: 67 HFRANYVITMLLTIFLSLLEHPISLIILIVMMIAWVYLYFLRVT--PLVIFGYEIDERYV 124
Query: 144 LAILSALTIFVVFLTSVGSVLVSALMLGVAFVCLHGAFRVPEDLF-LDEQ 192
+ L ++T ++ LT V + + + V +H R EDLF LDE
Sbjct: 125 VISLLSITAGLLVLTDVTHNVEVGMCFALGVVLIHAVLRETEDLFTLDED 174
>Medtr8g016150.1 | PRA1 family protein | HC | chr8:5396635-5395781 |
20130731
Length = 180
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 22 ASAGSDAPATSPAFRALINNLSESLRNGLSQRRPWSELTDRSAFSKPESFSDATLRVRKN 81
++ G+ + +P I + ++ GL RRPW + D + P +A RVR N
Sbjct: 3 STYGTIPTSPTPPKLEYITRGKQRIKAGLGTRRPWKTMFDIRSLGIPTGVPEAISRVRVN 62
Query: 82 FSYFRINYYXXXXXXXXXXXXTNPFSLITLTGLLASWTFLYLFRPADRPLVLFGRTFTDF 141
SYFR+NY +P+SLI L+A+W F Y R D+P++L+GR D
Sbjct: 63 ISYFRMNYTMVMLLILFLSLLWHPYSLIVFVILMAAWLFFYFLR--DQPVILWGRLVDDR 120
Query: 142 ETLAILSALTIFVVFLTSVGSVLVSALMLGVAFVCLHGAFRVPEDL 187
+ +++ +T+ ++ LT +V A+ + V HG FR EDL
Sbjct: 121 IVVVLMAFVTVALLLLTQATVNIVVAVSVATVVVVAHGVFRKTEDL 166
>Medtr1g080760.1 | PRA1 (prenylated RAB acceptor) family protein |
HC | chr1:35918114-35920354 | 20130731
Length = 194
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
Query: 54 RPWSELTDRSAFSKPESFSDATLRVRKNFSYFRINYYXXXXXXXXXXXXTNPFSLITLTG 113
R W E S+ S+P S+ DA LR+R N +YF+ NY +P S+I
Sbjct: 35 RSWREFFSLSSLSRPYSYDDAMLRLRHNLTYFQFNYTTTILLIVFLSLLWHPVSMIVFLI 94
Query: 114 LLASWTFLYLFRPADRPLVLFGRTFTDFETLAILSALTIFVVFLTSVGSVLVSALMLGVA 173
LL +W FLY R + PLV+F RT D + L +++ + T VG ++ AL++GV
Sbjct: 95 LLVAWFFLYFSR--NGPLVVFNRTLDDRIVICGLGVVSVVGLVATHVGVNVLVALIVGVV 152
Query: 174 FVCLHGAFRVPEDLFLDEQ 192
V LHG+FRV EDL++D++
Sbjct: 153 VVGLHGSFRVIEDLYVDQE 171
>Medtr1g080760.3 | PRA1 (prenylated RAB acceptor) family protein |
HC | chr1:35918114-35920415 | 20130731
Length = 194
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
Query: 54 RPWSELTDRSAFSKPESFSDATLRVRKNFSYFRINYYXXXXXXXXXXXXTNPFSLITLTG 113
R W E S+ S+P S+ DA LR+R N +YF+ NY +P S+I
Sbjct: 35 RSWREFFSLSSLSRPYSYDDAMLRLRHNLTYFQFNYTTTILLIVFLSLLWHPVSMIVFLI 94
Query: 114 LLASWTFLYLFRPADRPLVLFGRTFTDFETLAILSALTIFVVFLTSVGSVLVSALMLGVA 173
LL +W FLY R + PLV+F RT D + L +++ + T VG ++ AL++GV
Sbjct: 95 LLVAWFFLYFSR--NGPLVVFNRTLDDRIVICGLGVVSVVGLVATHVGVNVLVALIVGVV 152
Query: 174 FVCLHGAFRVPEDLFLDEQ 192
V LHG+FRV EDL++D++
Sbjct: 153 VVGLHGSFRVIEDLYVDQE 171
>Medtr1g080760.2 | PRA1 (prenylated RAB acceptor) family protein |
HC | chr1:35918114-35920415 | 20130731
Length = 194
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
Query: 54 RPWSELTDRSAFSKPESFSDATLRVRKNFSYFRINYYXXXXXXXXXXXXTNPFSLITLTG 113
R W E S+ S+P S+ DA LR+R N +YF+ NY +P S+I
Sbjct: 35 RSWREFFSLSSLSRPYSYDDAMLRLRHNLTYFQFNYTTTILLIVFLSLLWHPVSMIVFLI 94
Query: 114 LLASWTFLYLFRPADRPLVLFGRTFTDFETLAILSALTIFVVFLTSVGSVLVSALMLGVA 173
LL +W FLY R + PLV+F RT D + L +++ + T VG ++ AL++GV
Sbjct: 95 LLVAWFFLYFSR--NGPLVVFNRTLDDRIVICGLGVVSVVGLVATHVGVNVLVALIVGVV 152
Query: 174 FVCLHGAFRVPEDLFLDEQ 192
V LHG+FRV EDL++D++
Sbjct: 153 VVGLHGSFRVIEDLYVDQE 171
>Medtr1g093090.1 | PRA1 family protein | HC | chr1:33781981-33782826
| 20130731
Length = 181
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 1/156 (0%)
Query: 39 INNLSESLRNGLSQRRPWSELTDRSAFSKPESFSDATLRVRKNFSYFRINYYXXXXXXXX 98
++N E+ + LS R PWSE S S P SFS+AT RV N + F NY
Sbjct: 8 LSNFKEATLSILSTRHPWSEFLSFSTLSLPSSFSEATTRVGINLTRFLFNYTFIFLFILL 67
Query: 99 XXXXTNPFSLITLTGLLASWTFLYLFRPADRPLVLFG-RTFTDFETLAILSALTIFVVFL 157
+P +++ L A W FL+ R +D PL LF D + L ++FVV++
Sbjct: 68 ISLVYHPLAIVLLLIAFAGWYFLFFSRDSDEPLSLFNVVAVDDRVVVVALVVFSLFVVWV 127
Query: 158 TSVGSVLVSALMLGVAFVCLHGAFRVPEDLFLDEQE 193
+ V +V ++++ VCLHGA + + LD+ E
Sbjct: 128 SGVWVNVVVSVLVAAGIVCLHGALKRTDVGGLDDYE 163