Miyakogusa Predicted Gene

Lj0g3v0355919.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0355919.2 Non Characterized Hit- tr|F6I3I8|F6I3I8_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,33.97,2e-16,
,CUFF.24496.2
         (287 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g119920.1 | hypothetical protein | HC | chr4:49696694-4969...   362   e-100
Medtr8g027605.1 | embryo defective 1703 protein, putative | HC |...    61   1e-09

>Medtr4g119920.1 | hypothetical protein | HC |
           chr4:49696694-49699737 | 20130731
          Length = 564

 Score =  362 bits (929), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/286 (67%), Positives = 217/286 (75%), Gaps = 19/286 (6%)

Query: 3   QDSGSDATDHEGVLCEDKQVNHQNVVTDKSTSSVPLEESGKVVDNESREILNHGKDLEEK 62
           QD GS  TD  G+L  DKQVN Q+V TDK+ S VPLEE GK VD++S EI N GK+LEE 
Sbjct: 297 QDYGSQVTDRAGILDGDKQVNQQDV-TDKNASGVPLEERGKTVDDKSGEIQNEGKNLEEM 355

Query: 63  METPNKKTEVPAKANSNDNGGVQETSVGMSSLEVIQLNDSSETRTQNSQFFEEGNRGTSP 122
           +E PN KT+      S +NG   ETS+GMSS EV +L      RTQN+Q FE        
Sbjct: 356 IEAPNTKTKDGVTPKSINNGAFPETSIGMSSPEVREL------RTQNTQGFE-------- 401

Query: 123 ILEKDNVRSVNGSSRHGLAKKKSADNRVKAKQANTKIDMWWLNLRYVLVILMQRGSNGEG 182
              KDNV S+NGSS HGLAKK SA N+ K KQ  +K D+WWLNLRYVLVILMQRGSNGEG
Sbjct: 402 ---KDNVDSINGSSGHGLAKKNSAANKAKVKQEKSKTDIWWLNLRYVLVILMQRGSNGEG 458

Query: 183 GKGLYSVKFTSKEQGLSDGSYTVAFEDHADANNFCFLLDSFFEDLGD-FSANAVPMSIQE 241
            KGLYS+ FTSKE+  +D SYTVAFED ADANNFCFLL+S+FEDLGD FSANAVPMSIQE
Sbjct: 459 HKGLYSLNFTSKEREQNDDSYTVAFEDPADANNFCFLLESYFEDLGDNFSANAVPMSIQE 518

Query: 242 LSEEIISRAKKVIVVKKRQLQLYAGQLLTDVEMALCSIIEQDQNAP 287
           L+EEII   +KV+VVKKRQLQLYAGQLLTDVEMALCSIIEQDQN P
Sbjct: 519 LNEEIIFHGEKVVVVKKRQLQLYAGQLLTDVEMALCSIIEQDQNVP 564


>Medtr8g027605.1 | embryo defective 1703 protein, putative | HC |
            chr8:9909095-9914095 | 20130731
          Length = 1172

 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 54/109 (49%)

Query: 161  MWWLNLRYVLVILMQRGSNGEGGKGLYSVKFTSKEQGLSDGSYTVAFEDHADANNFCFLL 220
            +WWL+L YVL I + +  +GE   G YS++     +      + +AF+D  D  N C+++
Sbjct: 1021 LWWLDLPYVLCIEVYKVDDGEERVGFYSLEMAPDLELEPKPYHVIAFQDPGDCKNLCYIM 1080

Query: 221  DSFFEDLGDFSANAVPMSIQELSEEIISRAKKVIVVKKRQLQLYAGQLL 269
             +  + LG  +A  V    ++   +       V V+KK +LQL   Q L
Sbjct: 1081 QAHMDMLGGGNAFVVARPPKDAFRDAKENGFGVTVIKKGELQLNIDQPL 1129