Miyakogusa Predicted Gene

Lj0g3v0355589.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0355589.1 Non Characterized Hit- tr|B8LN53|B8LN53_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,41.61,0.00000000000004,DUF761,Protein of unknown function DUF761,
plant; seg,NULL,gene.g27931.t1.1
         (128 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g084690.1 | Avr9/Cf-9 rapidly elicited protein | HC | chr7...    94   2e-20

>Medtr7g084690.1 | Avr9/Cf-9 rapidly elicited protein | HC |
           chr7:32674127-32673024 | 20130731
          Length = 212

 Score = 94.4 bits (233), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/126 (46%), Positives = 71/126 (56%), Gaps = 18/126 (14%)

Query: 3   EYEFSCSNSPNPVFTHVPKRKHHHFNFPCSNYPXXX-------XXXXXXXXXXXXXXXPR 55
           +YEFSCSNSPNP F ++ KRKHH F+FPC N P                           
Sbjct: 76  DYEFSCSNSPNPAFFNMSKRKHH-FSFPCINAPNVIDEEPLPCQYQLSPIEFDIENVSKD 134

Query: 56  AVVLVPKTPEYLFNFRFDHASD---------FVRVSNYSSEDENEEGEINGQVDDQAEDF 106
              +VPKTPEY FNF+FD + +          VRVSNYS+  +N+E   N QVDD+AEDF
Sbjct: 135 GKAMVPKTPEYAFNFKFDSSEERKSPLLSPFSVRVSNYSALGDNDEIG-NCQVDDEAEDF 193

Query: 107 IRRFYE 112
           IRRFYE
Sbjct: 194 IRRFYE 199