Miyakogusa Predicted Gene
- Lj0g3v0354659.4
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0354659.4 tr|G7IWF0|G7IWF0_MEDTR Activating signal
cointegrator 1 complex subunit OS=Medicago truncatula
GN=MT,88.41,0,DEAD-like helicases superfamily,Helicase, superfamily
1/2, ATP-binding domain; helicase superfamily ,CUFF.24499.4
(497 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g025300.2 | U5 small nuclear ribonucleoprotein helicase | ... 954 0.0
Medtr3g025300.1 | U5 small nuclear ribonucleoprotein helicase | ... 954 0.0
Medtr2g064740.1 | U5 small nuclear ribonucleoprotein 200 kDa hel... 565 e-161
Medtr4g011450.1 | U5 small nuclear ribonucleoprotein 200 kDa hel... 550 e-156
Medtr4g011450.2 | U5 small nuclear ribonucleoprotein 200 kDa hel... 550 e-156
Medtr7g075463.2 | ATP-binding; ATP-dependent helicase; DNA helic... 258 1e-68
Medtr7g075463.4 | ATP-binding; ATP-dependent helicase; DNA helic... 258 1e-68
Medtr7g075463.1 | ATP-binding; ATP-dependent helicase; DNA helic... 258 1e-68
Medtr7g075463.3 | ATP-binding; ATP-dependent helicase; DNA helic... 258 1e-68
Medtr4g008780.1 | U5 small nuclear ribonucleoprotein 200 kDa hel... 216 6e-56
Medtr2g030905.1 | U5 small nuclear ribonucleoprotein 200 kDa hel... 208 9e-54
Medtr2g064390.1 | U5 small nuclear ribonucleoprotein helicase | ... 160 3e-39
Medtr1g008600.1 | ATP-binding; ATP-dependent helicase; DNA helic... 118 1e-26
Medtr7g080730.1 | superkiller viralicidic activity-like protein ... 100 2e-21
Medtr8g101340.1 | RNA helicase, ATP-dependent, SK12/DOB1 protein... 94 2e-19
Medtr5g069360.1 | DEAD/DEAH-box RNA helicase | HC | chr5:2940354... 93 6e-19
Medtr4g008770.1 | U5 small nuclear ribonucleoprotein 200 kDa hel... 89 1e-17
Medtr3g462290.1 | RNA helicase, ATP-dependent, SK12/DOB1 protein... 71 3e-12
Medtr5g036660.1 | DEAD-box ATP-dependent RNA helicase ISE2 | HC ... 70 5e-12
Medtr1g007510.1 | DNA polymerase theta-like protein | HC | chr1:... 61 2e-09
Medtr0312s0040.1 | DNA polymerase theta-like protein | HC | scaf... 60 6e-09
>Medtr3g025300.2 | U5 small nuclear ribonucleoprotein helicase | HC
| chr3:7719529-7695186 | 20130731
Length = 1734
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/493 (91%), Positives = 478/493 (96%)
Query: 5 QIGQHFKDGYLHKDEFKIVYVAPMKALAAEVTRTFSQRLSPLNMTVRELTGDMQLSKNEL 64
+IGQHFKDGYLHKD+FKIVYVAPMKALAAEVT TFSQRLSPLNM+VRELTGDMQLSKNEL
Sbjct: 477 EIGQHFKDGYLHKDKFKIVYVAPMKALAAEVTSTFSQRLSPLNMSVRELTGDMQLSKNEL 536
Query: 65 EETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVE 124
EETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVE
Sbjct: 537 EETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVE 596
Query: 125 SSQTMIRIVGLSATLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGISEQNFAAR 184
SSQ+MIRIVGLSATLPNYLEVAQFLRVNPD GLFFFDS+YRPVPLAQQYIGISE NFAAR
Sbjct: 597 SSQSMIRIVGLSATLPNYLEVAQFLRVNPDTGLFFFDSSYRPVPLAQQYIGISEPNFAAR 656
Query: 185 NELLNDICYKKVVESIRQGYQAMVFVHSRKDTAKTAQKLVELVQKHEELELFSNNTHAQY 244
NELLN ICY+KV +SIRQG+QAMVFVHSRKDTAKTAQKL EL + +++LELF+N+TH Y
Sbjct: 657 NELLNVICYRKVADSIRQGHQAMVFVHSRKDTAKTAQKLTELARANDDLELFNNDTHPHY 716
Query: 245 SLMKREVVKSRNRDVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGV 304
MK+EVVKSRN+D+V LFE GMGIHHAGMLR+DRGLTERLFS+GLLKVLVCTATLAWGV
Sbjct: 717 FFMKKEVVKSRNKDLVQLFELGMGIHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGV 776
Query: 305 NLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAYY 364
NLPAHTVVIKGTQ+YDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSH+KLAYY
Sbjct: 777 NLPAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYY 836
Query: 365 LRLLTSQLPIESQFITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIG 424
LRLLTSQLPIESQFI+SLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIG
Sbjct: 837 LRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIG 896
Query: 425 WDEVMADPNLSSKQRSLVIDAARALDKAKMMRFDEKSGSFYCTELGRIASHFYIQFSSVQ 484
WDEVMADP LSSKQRSLVIDAAR+LDKAKMMRFDEKSG+FYCTELGRIASHFYIQ+SSV+
Sbjct: 897 WDEVMADPALSSKQRSLVIDAARSLDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVE 956
Query: 485 TYNEMLRRHMNDS 497
TYNEMLRRHMNDS
Sbjct: 957 TYNEMLRRHMNDS 969
Score = 280 bits (716), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/400 (37%), Positives = 227/400 (56%), Gaps = 6/400 (1%)
Query: 19 EFKIVYVAPMKALAAEVTRTFSQRL-SPLNMTVRELTGDMQLSKNELEETQMIVTTPEKW 77
+ K++Y+AP+KA+ E + +RL S L + E+TGD L +I++TPEKW
Sbjct: 1331 DMKVIYIAPLKAIVRERMSDWRKRLVSQLGKKMVEMTGDYTPDLMALLSANIIISTPEKW 1390
Query: 78 DVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESSQTMIRIVGLSA 137
D I+R S V L+I+DE+HLL DRGP++E +V+R ++ +R VGLS
Sbjct: 1391 DGISRNWHSRSYVTKVGLIILDEIHLLGADRGPILEVIVSRMRYISSQTERPVRFVGLST 1450
Query: 138 TLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGISEQNFAARNELLNDICYKKVV 197
L N ++A +L V + GLF F + RPVPL G + + R +N Y +
Sbjct: 1451 ALANAGDLADWLGVE-EIGLFNFKPSVRPVPLEVHIQGYPGKYYCPRMNSMNKPAYAAIC 1509
Query: 198 ESIRQGYQAMVFVHSRKDTAKTAQKLVELVQKHEELELFSNNTHAQYSLMKREVVKSRNR 257
+ ++FV SR+ T TA L++ E F N + +V ++
Sbjct: 1510 -THSPAKPVLIFVSSRRQTRLTALDLIQFAASDEHSRQFLNMPEEALEMFLSQV---SDQ 1565
Query: 258 DVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQ 317
++ +FG+G+HHAG+ DR L E LF++ ++VLVCT+TLAWGVNLPAH V+IKGT+
Sbjct: 1566 NLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTE 1625
Query: 318 LYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAYYLRLLTSQLPIESQ 377
YD K + D + D++Q+ GRAGRPQFD+ G+ +I+ K ++Y + L P+ES
Sbjct: 1626 YYDGKTKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFPVESS 1685
Query: 378 FITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMN 417
L D++NAE+ GT+ N ++A +L +TYLF R+ N
Sbjct: 1686 LRERLHDHINAEIVSGTICNKQDAVHYLTWTYLFRRLEGN 1725
>Medtr3g025300.1 | U5 small nuclear ribonucleoprotein helicase | HC
| chr3:7719529-7688875 | 20130731
Length = 2081
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/493 (91%), Positives = 478/493 (96%)
Query: 5 QIGQHFKDGYLHKDEFKIVYVAPMKALAAEVTRTFSQRLSPLNMTVRELTGDMQLSKNEL 64
+IGQHFKDGYLHKD+FKIVYVAPMKALAAEVT TFSQRLSPLNM+VRELTGDMQLSKNEL
Sbjct: 477 EIGQHFKDGYLHKDKFKIVYVAPMKALAAEVTSTFSQRLSPLNMSVRELTGDMQLSKNEL 536
Query: 65 EETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVE 124
EETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVE
Sbjct: 537 EETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVE 596
Query: 125 SSQTMIRIVGLSATLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGISEQNFAAR 184
SSQ+MIRIVGLSATLPNYLEVAQFLRVNPD GLFFFDS+YRPVPLAQQYIGISE NFAAR
Sbjct: 597 SSQSMIRIVGLSATLPNYLEVAQFLRVNPDTGLFFFDSSYRPVPLAQQYIGISEPNFAAR 656
Query: 185 NELLNDICYKKVVESIRQGYQAMVFVHSRKDTAKTAQKLVELVQKHEELELFSNNTHAQY 244
NELLN ICY+KV +SIRQG+QAMVFVHSRKDTAKTAQKL EL + +++LELF+N+TH Y
Sbjct: 657 NELLNVICYRKVADSIRQGHQAMVFVHSRKDTAKTAQKLTELARANDDLELFNNDTHPHY 716
Query: 245 SLMKREVVKSRNRDVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGV 304
MK+EVVKSRN+D+V LFE GMGIHHAGMLR+DRGLTERLFS+GLLKVLVCTATLAWGV
Sbjct: 717 FFMKKEVVKSRNKDLVQLFELGMGIHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGV 776
Query: 305 NLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAYY 364
NLPAHTVVIKGTQ+YDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSH+KLAYY
Sbjct: 777 NLPAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYY 836
Query: 365 LRLLTSQLPIESQFITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIG 424
LRLLTSQLPIESQFI+SLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIG
Sbjct: 837 LRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIG 896
Query: 425 WDEVMADPNLSSKQRSLVIDAARALDKAKMMRFDEKSGSFYCTELGRIASHFYIQFSSVQ 484
WDEVMADP LSSKQRSLVIDAAR+LDKAKMMRFDEKSG+FYCTELGRIASHFYIQ+SSV+
Sbjct: 897 WDEVMADPALSSKQRSLVIDAARSLDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVE 956
Query: 485 TYNEMLRRHMNDS 497
TYNEMLRRHMNDS
Sbjct: 957 TYNEMLRRHMNDS 969
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/469 (35%), Positives = 259/469 (55%), Gaps = 11/469 (2%)
Query: 19 EFKIVYVAPMKALAAEVTRTFSQRL-SPLNMTVRELTGDMQLSKNELEETQMIVTTPEKW 77
+ K++Y+AP+KA+ E + +RL S L + E+TGD L +I++TPEKW
Sbjct: 1331 DMKVIYIAPLKAIVRERMSDWRKRLVSQLGKKMVEMTGDYTPDLMALLSANIIISTPEKW 1390
Query: 78 DVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESSQTMIRIVGLSA 137
D I+R S V L+I+DE+HLL DRGP++E +V+R ++ +R VGLS
Sbjct: 1391 DGISRNWHSRSYVTKVGLIILDEIHLLGADRGPILEVIVSRMRYISSQTERPVRFVGLST 1450
Query: 138 TLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGISEQNFAARNELLNDICYKKVV 197
L N ++A +L V + GLF F + RPVPL G + + R +N Y +
Sbjct: 1451 ALANAGDLADWLGVE-EIGLFNFKPSVRPVPLEVHIQGYPGKYYCPRMNSMNKPAYAAIC 1509
Query: 198 ESIRQGYQAMVFVHSRKDTAKTAQKLVELVQKHEELELFSNNTHAQYSLMKREVVKSRNR 257
+ ++FV SR+ T TA L++ E F N + +V ++
Sbjct: 1510 -THSPAKPVLIFVSSRRQTRLTALDLIQFAASDEHSRQFLNMPEEALEMFLSQV---SDQ 1565
Query: 258 DVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQ 317
++ +FG+G+HHAG+ DR L E LF++ ++VLVCT+TLAWGVNLPAH V+IKGT+
Sbjct: 1566 NLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTE 1625
Query: 318 LYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAYYLRLLTSQLPIESQ 377
YD K + D + D++Q+ GRAGRPQFD+ G+ +I+ K ++Y + L P+ES
Sbjct: 1626 YYDGKTKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFPVESS 1685
Query: 378 FITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIGWDEVMADPNLSSK 437
L D++NAE+ GT+ N ++A +L +TYLF R+ +NP YG+ E + LSS
Sbjct: 1686 LRERLHDHINAEIVSGTICNKQDAVHYLTWTYLFRRLMVNPAYYGL---ENVEPEFLSSF 1742
Query: 438 QRSLVIDAARALDKAKMMRFDEKSGSFYCTELGRIASHFYIQFSSVQTY 486
SLV L+ + ++ +E LG +AS +Y+ + +V +
Sbjct: 1743 LSSLVQSTFEDLEDSGCIKMNED--VVEPVMLGSVASQYYLSYMTVSMF 1789
>Medtr2g064740.1 | U5 small nuclear ribonucleoprotein 200 kDa helicase
| HC | chr2:29260637-29270804 | 20130731
Length = 2188
Score = 565 bits (1457), Expect = e-161, Method: Compositional matrix adjust.
Identities = 271/494 (54%), Positives = 358/494 (72%), Gaps = 3/494 (0%)
Query: 5 QIGQH--FKDGYLHKDEFKIVYVAPMKALAAEVTRTFSQRLSPLNMTVRELTGDMQLSKN 62
QI +H DG + +KIVYVAPMKAL AEV S RL N+TVREL+GD L++
Sbjct: 563 QIARHRNTDDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQDYNVTVRELSGDQSLTRQ 622
Query: 63 ELEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQ 122
++EETQ+IVTTPEKWD+ITRKS D + + LVKL+IIDE+HLL+D+RGPV+E++VART+RQ
Sbjct: 623 QIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLVIIDEIHLLHDNRGPVLESIVARTVRQ 682
Query: 123 VESSQTMIRIVGLSATLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGISEQNFA 182
+E+S+ IR+VGLSATLPNY +VA FLRV+ + GLF+FD++YRPVPL+QQYIGI+ +
Sbjct: 683 IETSKDYIRLVGLSATLPNYEDVALFLRVDLNKGLFYFDNSYRPVPLSQQYIGITIKKPL 742
Query: 183 ARNELLNDICYKKVVESIRQGYQAMVFVHSRKDTAKTAQKLVELVQKHEELELFSNNTHA 242
R +L+NDICY+KV++ + +Q ++FVHSRK+TAKTA+ + + + L F A
Sbjct: 743 QRFQLMNDICYRKVLD-VAGKHQVLIFVHSRKETAKTARAIRDAALADDTLGRFLKEDSA 801
Query: 243 QYSLMKREVVKSRNRDVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAW 302
++ ++ D+ DL +G IHHAGM R DR L E LF+DG +VLV TATLAW
Sbjct: 802 SREILHTHTDLVKSSDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHAQVLVSTATLAW 861
Query: 303 GVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLA 362
GVNLPAHTV+IKGTQ+Y+P+ G W +L LDVMQ+ GRAGRPQ+D GEGII+T H +L
Sbjct: 862 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIILTGHSELQ 921
Query: 363 YYLRLLTSQLPIESQFITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYG 422
YYL L+ QLPIESQFI+ L D LNAE+ LGTV N KEAC W+GYTYL++RM NP YG
Sbjct: 922 YYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAKEACHWIGYTYLYVRMLRNPSLYG 981
Query: 423 IGWDEVMADPNLSSKQRSLVIDAARALDKAKMMRFDEKSGSFYCTELGRIASHFYIQFSS 482
+ D + D L ++ L+ AA LD+ ++++D KSG F T+LGRIAS++YI +
Sbjct: 982 LAPDVLSRDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1041
Query: 483 VQTYNEMLRRHMND 496
+ TYNE L+ M D
Sbjct: 1042 ISTYNEHLKPTMGD 1055
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 154/484 (31%), Positives = 251/484 (51%), Gaps = 33/484 (6%)
Query: 20 FKIVYVAPMKALAAEVTRTFSQRLSP-LNMTVRELTGDMQLSKNELEETQMIVTTPEKWD 78
++VY+AP++ALA E R + ++ L + V ELTG+ LE+ Q+I++TPEKWD
Sbjct: 1419 MRVVYIAPVEALAKERYRDWEKKFGGGLKLKVVELTGETATDLKLLEKGQVIISTPEKWD 1478
Query: 79 VITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESS-QTMIRIVGLSA 137
++R+ V L IIDE+HL+ GPV+E +V+R +R + S + IRIV LS
Sbjct: 1479 ALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSR-MRYISSQLENKIRIVALST 1537
Query: 138 TLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGISEQNFAARNELLNDICYKKVV 197
+L N ++ +++ GLF F RPVPL G+ NF AR + + Y +
Sbjct: 1538 SLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTSIA 1596
Query: 198 ESIRQGYQAMVFVHSRKDTAKTAQKLVE-----------LVQKHEELELFSNNTHAQYSL 246
+ + A+VFV +RK TA L+ L++ EELE F N
Sbjct: 1597 QHAKNKKPAIVFVPTRKHVRLTAVDLITYSGADSGEKPFLLRSLEELEPFINK------- 1649
Query: 247 MKREVVKSRNRDVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNL 306
+ E++K R+ G+G H G+ D + +LF G ++V V ++++ WGV L
Sbjct: 1650 ISDEMLKVTLRE-------GVGYLHEGLNSLDHDIVAQLFEAGWIQVCVLSSSMCWGVTL 1702
Query: 307 PAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAYYLR 366
AH VV+ GTQ YD + D + D++Q+ G A RP D SG+ +I+ + YY +
Sbjct: 1703 SAHLVVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKK 1762
Query: 367 LLTSQLPIESQFITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIGWD 426
L P+ES L DNLNAE+ G + N ++A +L +T+++ R+ NP Y +
Sbjct: 1763 FLYEAFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNL--- 1819
Query: 427 EVMADPNLSSKQRSLVIDAARALDKAKMMRFDEKSGSFYCTELGRIASHFYIQFSSVQTY 486
+ ++ +LS +V + L+ +K + E LG IAS++YI +++++ +
Sbjct: 1820 QGVSHRHLSDHLSEMVENTLSDLEASKCVSI-EDDMDLSPLNLGMIASYYYISYTTIERF 1878
Query: 487 NEML 490
+ L
Sbjct: 1879 SSSL 1882
>Medtr4g011450.1 | U5 small nuclear ribonucleoprotein 200 kDa helicase
| HC | chr4:2793467-2800896 | 20130731
Length = 2099
Score = 550 bits (1418), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/485 (52%), Positives = 352/485 (72%), Gaps = 1/485 (0%)
Query: 12 DGYLHKDEFKIVYVAPMKALAAEVTRTFSQRLSPLNMTVRELTGDMQLSKNELEETQMIV 71
DG + +KIVYVAPMKAL E+ S RL ++ VREL+GD L++ ++EETQ+IV
Sbjct: 527 DGSIDHSAYKIVYVAPMKALVTEIVGNLSNRLQEYDVKVRELSGDQSLTQKQMEETQIIV 586
Query: 72 TTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESSQTMIR 131
TTPEKWD+ITRKS D + LVKLLIIDE+HLL+D+RGPV+E+++ART+RQ+E+++ IR
Sbjct: 587 TTPEKWDIITRKSGDRIYTQLVKLLIIDEIHLLHDNRGPVLESIIARTVRQIETTKDYIR 646
Query: 132 IVGLSATLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGISEQNFAARNELLNDI 191
+VGLSATLPN+ +VA+FLRV+ + GLF+FD++YRPVPL+QQ+IGI+ + R +L+NDI
Sbjct: 647 LVGLSATLPNFEDVARFLRVDHNKGLFYFDNSYRPVPLSQQFIGITVKKPFQRYQLMNDI 706
Query: 192 CYKKVVESIRQGYQAMVFVHSRKDTAKTAQKLVELVQKHEELELFSNNTHAQYSLMKREV 251
C++KV+ + +Q ++FVHSRK+TAKTA+ + + ++ L F A ++
Sbjct: 707 CFEKVMAEAGK-HQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREILHSHT 765
Query: 252 VKSRNRDVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTV 311
++ D+ DL +G IHHAGM R DR L E LF+ G ++VLV TATLAWGVNLPAHTV
Sbjct: 766 DLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFASGHVQVLVSTATLAWGVNLPAHTV 825
Query: 312 VIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAYYLRLLTSQ 371
+IKGT++Y+P+ G W +L LDVMQ+ GRAGRPQ+D G GI++T H +L YYL L+ Q
Sbjct: 826 IIKGTKIYNPERGAWTELSPLDVMQMLGRAGRPQYDSCGMGIVVTGHSELQYYLSLMNQQ 885
Query: 372 LPIESQFITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIGWDEVMAD 431
LPIESQFI+ L D LNAE+ LGTV N KEAC W+GYTYL++RM NP YG+ D VM D
Sbjct: 886 LPIESQFISKLADQLNAEIVLGTVQNAKEACNWIGYTYLYVRMSRNPSLYGLAPDVVMRD 945
Query: 432 PNLSSKQRSLVIDAARALDKAKMMRFDEKSGSFYCTELGRIASHFYIQFSSVQTYNEMLR 491
L ++ L+ AA LD+ ++++D KSG F T+LGRIAS++YI ++ TYNE L+
Sbjct: 946 ITLEERRADLIHSAATILDRNNLVKYDRKSGYFQATDLGRIASYYYITHGTISTYNEHLK 1005
Query: 492 RHMND 496
M +
Sbjct: 1006 ASMGN 1010
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 148/492 (30%), Positives = 238/492 (48%), Gaps = 37/492 (7%)
Query: 21 KIVYVAPMKALAAEVTRTFSQRLSP-LNMTVRELTGDMQLSKNELEETQMIVTTPEKWDV 79
++VYVAP++ALA E R + ++ L V ELTG+ LE+ Q+I++TPEKWD
Sbjct: 1375 RVVYVAPIEALAKERYRDWEKKFGGGLKFAVVELTGETTTDLKLLEKGQIIISTPEKWDA 1434
Query: 80 ITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESSQTMIRIVGLSATL 139
++R+ V L IIDE+HL+ RG V+E +V+R + IR V LS ++
Sbjct: 1435 LSRRWKQRKHVQQVSLFIIDELHLIGGQRGSVLEVIVSRMKYIANQVENKIRFVALSTSV 1494
Query: 140 PNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGISEQNFAARNELLNDICYKKVVES 199
N ++ ++ GLF F RPVPL + NF AR + + Y + +
Sbjct: 1495 ANAKDLGDWIGAT-SHGLFNFSPVVRPVPLEIHIQSVDIANFKARMQAMTKRTYTAIAQH 1553
Query: 200 IRQGYQAMVFVHSRKDTAKTAQKLVE-----------LVQKHEELELFSNNTHAQYSLMK 248
+ G A+VFV +RK T L+ L+Q +ELE F N +
Sbjct: 1554 AKNGKPALVFVPTRKHVRLTTMDLITYSSADSGEKSFLLQSTKELEPFLNK-------IS 1606
Query: 249 REVVKSRNRDVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPA 308
E++K R+ G+G H G+ D + +LF G ++V V ++++ + V L A
Sbjct: 1607 DEMLKVTLRE-------GVGYLHEGLSSLDHDIVAQLFEAGWIQVCVLSSSMCYIVTLLA 1659
Query: 309 HTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAYYLRLL 368
H VV+ GT YD + D + D++Q+ G A RP D SG+ +I+ YY + L
Sbjct: 1660 HLVVVMGTLYYDGE-NAQTDYPVTDLLQMMGHASRPLVDHSGKCVILCHAPSKEYYKKFL 1718
Query: 369 TSQLPIESQFITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIGWDEV 428
P+ES L DNLNAE+ G + N ++ +L +T+++ R+ NP Y + +
Sbjct: 1719 FEAFPVESHLHHFLHDNLNAEIVAGIIENKQDVVDYLTWTFMYRRLTQNPNYYNL---QG 1775
Query: 429 MADPNLSSKQRSLVIDAARALDKAKMMRFDEKSGSFYCTELGRIASHF-----YIQFSSV 483
++ +LS LV + L+ +K + E LG I+S++ Y +
Sbjct: 1776 VSHRHLSDYLSELVENTLSDLEASKCVSI-EDDIHLSPLNLGMISSYYNITSEYAYLPIL 1834
Query: 484 QTYNEMLRRHMN 495
E++RR +N
Sbjct: 1835 PGEEEVVRRLIN 1846
>Medtr4g011450.2 | U5 small nuclear ribonucleoprotein 200 kDa helicase
| HC | chr4:2793467-2800740 | 20130731
Length = 2072
Score = 550 bits (1417), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/485 (52%), Positives = 352/485 (72%), Gaps = 1/485 (0%)
Query: 12 DGYLHKDEFKIVYVAPMKALAAEVTRTFSQRLSPLNMTVRELTGDMQLSKNELEETQMIV 71
DG + +KIVYVAPMKAL E+ S RL ++ VREL+GD L++ ++EETQ+IV
Sbjct: 527 DGSIDHSAYKIVYVAPMKALVTEIVGNLSNRLQEYDVKVRELSGDQSLTQKQMEETQIIV 586
Query: 72 TTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESSQTMIR 131
TTPEKWD+ITRKS D + LVKLLIIDE+HLL+D+RGPV+E+++ART+RQ+E+++ IR
Sbjct: 587 TTPEKWDIITRKSGDRIYTQLVKLLIIDEIHLLHDNRGPVLESIIARTVRQIETTKDYIR 646
Query: 132 IVGLSATLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGISEQNFAARNELLNDI 191
+VGLSATLPN+ +VA+FLRV+ + GLF+FD++YRPVPL+QQ+IGI+ + R +L+NDI
Sbjct: 647 LVGLSATLPNFEDVARFLRVDHNKGLFYFDNSYRPVPLSQQFIGITVKKPFQRYQLMNDI 706
Query: 192 CYKKVVESIRQGYQAMVFVHSRKDTAKTAQKLVELVQKHEELELFSNNTHAQYSLMKREV 251
C++KV+ + +Q ++FVHSRK+TAKTA+ + + ++ L F A ++
Sbjct: 707 CFEKVMAEAGK-HQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREILHSHT 765
Query: 252 VKSRNRDVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTV 311
++ D+ DL +G IHHAGM R DR L E LF+ G ++VLV TATLAWGVNLPAHTV
Sbjct: 766 DLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFASGHVQVLVSTATLAWGVNLPAHTV 825
Query: 312 VIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAYYLRLLTSQ 371
+IKGT++Y+P+ G W +L LDVMQ+ GRAGRPQ+D G GI++T H +L YYL L+ Q
Sbjct: 826 IIKGTKIYNPERGAWTELSPLDVMQMLGRAGRPQYDSCGMGIVVTGHSELQYYLSLMNQQ 885
Query: 372 LPIESQFITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIGWDEVMAD 431
LPIESQFI+ L D LNAE+ LGTV N KEAC W+GYTYL++RM NP YG+ D VM D
Sbjct: 886 LPIESQFISKLADQLNAEIVLGTVQNAKEACNWIGYTYLYVRMSRNPSLYGLAPDVVMRD 945
Query: 432 PNLSSKQRSLVIDAARALDKAKMMRFDEKSGSFYCTELGRIASHFYIQFSSVQTYNEMLR 491
L ++ L+ AA LD+ ++++D KSG F T+LGRIAS++YI ++ TYNE L+
Sbjct: 946 ITLEERRADLIHSAATILDRNNLVKYDRKSGYFQATDLGRIASYYYITHGTISTYNEHLK 1005
Query: 492 RHMND 496
M +
Sbjct: 1006 ASMGN 1010
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 145/487 (29%), Positives = 233/487 (47%), Gaps = 37/487 (7%)
Query: 26 APMKALAAEVTRTFSQRLSP-LNMTVRELTGDMQLSKNELEETQMIVTTPEKWDVITRKS 84
AP++ALA E R + ++ L V ELTG+ LE+ Q+I++TPEKWD ++R+
Sbjct: 1353 APIEALAKERYRDWEKKFGGGLKFAVVELTGETTTDLKLLEKGQIIISTPEKWDALSRRW 1412
Query: 85 SDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESSQTMIRIVGLSATLPNYLE 144
V L IIDE+HL+ RG V+E +V+R + IR V LS ++ N +
Sbjct: 1413 KQRKHVQQVSLFIIDELHLIGGQRGSVLEVIVSRMKYIANQVENKIRFVALSTSVANAKD 1472
Query: 145 VAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGISEQNFAARNELLNDICYKKVVESIRQGY 204
+ ++ GLF F RPVPL + NF AR + + Y + + + G
Sbjct: 1473 LGDWIGAT-SHGLFNFSPVVRPVPLEIHIQSVDIANFKARMQAMTKRTYTAIAQHAKNGK 1531
Query: 205 QAMVFVHSRKDTAKTAQKLVE-----------LVQKHEELELFSNNTHAQYSLMKREVVK 253
A+VFV +RK T L+ L+Q +ELE F N + E++K
Sbjct: 1532 PALVFVPTRKHVRLTTMDLITYSSADSGEKSFLLQSTKELEPFLNK-------ISDEMLK 1584
Query: 254 SRNRDVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVI 313
R+ G+G H G+ D + +LF G ++V V ++++ + V L AH VV+
Sbjct: 1585 VTLRE-------GVGYLHEGLSSLDHDIVAQLFEAGWIQVCVLSSSMCYIVTLLAHLVVV 1637
Query: 314 KGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAYYLRLLTSQLP 373
GT YD + D + D++Q+ G A RP D SG+ +I+ YY + L P
Sbjct: 1638 MGTLYYDGE-NAQTDYPVTDLLQMMGHASRPLVDHSGKCVILCHAPSKEYYKKFLFEAFP 1696
Query: 374 IESQFITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIGWDEVMADPN 433
+ES L DNLNAE+ G + N ++ +L +T+++ R+ NP Y + + ++ +
Sbjct: 1697 VESHLHHFLHDNLNAEIVAGIIENKQDVVDYLTWTFMYRRLTQNPNYYNL---QGVSHRH 1753
Query: 434 LSSKQRSLVIDAARALDKAKMMRFDEKSGSFYCTELGRIASHF-----YIQFSSVQTYNE 488
LS LV + L+ +K + E LG I+S++ Y + E
Sbjct: 1754 LSDYLSELVENTLSDLEASKCVSI-EDDIHLSPLNLGMISSYYNITSEYAYLPILPGEEE 1812
Query: 489 MLRRHMN 495
++RR +N
Sbjct: 1813 VVRRLIN 1819
>Medtr7g075463.2 | ATP-binding; ATP-dependent helicase; DNA helicase
| HC | chr7:28265418-28275446 | 20130731
Length = 940
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 267/486 (54%), Gaps = 23/486 (4%)
Query: 14 YLH-KDEFKIVYVAPMKALAAEVTRTFSQRLSPLNMTVRELTGDMQ-LSKNELEETQMIV 71
++H K K +Y+AP KAL E R ++Q+ P + ELTGD + + + E +I+
Sbjct: 75 FIHVKGSLKTIYIAPSKALVQEKVRDWNQKFGPWGICCLELTGDNESYTPRNINEADIIL 134
Query: 72 TTPEKWDVITR---KSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESSQT 128
TTPEK+D ++R +S +S + LL+IDEVHLLND RG +EA+V+R ++ + +
Sbjct: 135 TTPEKFDAVSRYGIESGGLSFFSDIALLLIDEVHLLNDPRGAALEAIVSR-IKIISCNPK 193
Query: 129 M-------IRIVGLSATLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGIS--EQ 179
M +R + LSAT+PN ++A++L V PD G+ F RPV L + G + +
Sbjct: 194 MKLNPLAQVRFLALSATIPNIEDLAKWLLV-PDQGIKRFGEEMRPVKLTTKVFGYAPAKN 252
Query: 180 NFAARNELLNDICYKKVVESIRQGYQAMVFVHSRKDTAKTAQKLVELVQKHEELELFSNN 239
+F L N I ++ +G A++F +RK + AQ+L ++V + F +
Sbjct: 253 DFLFEKRLQNYIF--DILMQYSKGKSALIFCSTRKGAQEAAQRLAQIVMNFGQSNPFIKS 310
Query: 240 THAQYSLMKREVVKS-RNRDVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVCTA 298
Q L RE S ++ + +G+G H+ G+ DR + E LF G ++VL T
Sbjct: 311 REQQDQL--REASMSLSDKQMQSYILYGVGYHNGGLCHKDRSIVEGLFLKGDIQVLCTTN 368
Query: 299 TLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSH 358
TLA G+NLPAHTVVIK TQ ++ + + + ++Q+ GRAGRP FD +G II+T
Sbjct: 369 TLAHGINLPAHTVVIKSTQHFNKEKSLYMEYDRSTILQMSGRAGRPPFDDTGMVIIMTRR 428
Query: 359 EKLAYYLRLLTSQLPIESQFITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNP 418
E + Y LL+ +ESQ ++ + ++L AE+ TV+++ +A W+ +YL++RM+ NP
Sbjct: 429 ETVHLYENLLSGCEVVESQLLSCVTEHLLAEIVQLTVSDITKAIEWMKCSYLYVRMKRNP 488
Query: 419 LAYGIGWDEVMADPNLSSKQRSLVIDAARALDKAKMMRFDEKSGSFYCTELGRIASHFYI 478
YGI + AD L + + + L + +M+ DE + GR+ + +Y+
Sbjct: 489 ENYGIK-KGISAD-RLEKHVQEICVQKVNELSQYQMVWVDEDGFLLRPLDPGRLMTKYYL 546
Query: 479 QFSSVQ 484
+F +++
Sbjct: 547 RFDTMK 552
>Medtr7g075463.4 | ATP-binding; ATP-dependent helicase; DNA helicase
| HC | chr7:28265418-28275446 | 20130731
Length = 940
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 267/486 (54%), Gaps = 23/486 (4%)
Query: 14 YLH-KDEFKIVYVAPMKALAAEVTRTFSQRLSPLNMTVRELTGDMQ-LSKNELEETQMIV 71
++H K K +Y+AP KAL E R ++Q+ P + ELTGD + + + E +I+
Sbjct: 75 FIHVKGSLKTIYIAPSKALVQEKVRDWNQKFGPWGICCLELTGDNESYTPRNINEADIIL 134
Query: 72 TTPEKWDVITR---KSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESSQT 128
TTPEK+D ++R +S +S + LL+IDEVHLLND RG +EA+V+R ++ + +
Sbjct: 135 TTPEKFDAVSRYGIESGGLSFFSDIALLLIDEVHLLNDPRGAALEAIVSR-IKIISCNPK 193
Query: 129 M-------IRIVGLSATLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGIS--EQ 179
M +R + LSAT+PN ++A++L V PD G+ F RPV L + G + +
Sbjct: 194 MKLNPLAQVRFLALSATIPNIEDLAKWLLV-PDQGIKRFGEEMRPVKLTTKVFGYAPAKN 252
Query: 180 NFAARNELLNDICYKKVVESIRQGYQAMVFVHSRKDTAKTAQKLVELVQKHEELELFSNN 239
+F L N I ++ +G A++F +RK + AQ+L ++V + F +
Sbjct: 253 DFLFEKRLQNYIF--DILMQYSKGKSALIFCSTRKGAQEAAQRLAQIVMNFGQSNPFIKS 310
Query: 240 THAQYSLMKREVVKS-RNRDVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVCTA 298
Q L RE S ++ + +G+G H+ G+ DR + E LF G ++VL T
Sbjct: 311 REQQDQL--REASMSLSDKQMQSYILYGVGYHNGGLCHKDRSIVEGLFLKGDIQVLCTTN 368
Query: 299 TLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSH 358
TLA G+NLPAHTVVIK TQ ++ + + + ++Q+ GRAGRP FD +G II+T
Sbjct: 369 TLAHGINLPAHTVVIKSTQHFNKEKSLYMEYDRSTILQMSGRAGRPPFDDTGMVIIMTRR 428
Query: 359 EKLAYYLRLLTSQLPIESQFITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNP 418
E + Y LL+ +ESQ ++ + ++L AE+ TV+++ +A W+ +YL++RM+ NP
Sbjct: 429 ETVHLYENLLSGCEVVESQLLSCVTEHLLAEIVQLTVSDITKAIEWMKCSYLYVRMKRNP 488
Query: 419 LAYGIGWDEVMADPNLSSKQRSLVIDAARALDKAKMMRFDEKSGSFYCTELGRIASHFYI 478
YGI + AD L + + + L + +M+ DE + GR+ + +Y+
Sbjct: 489 ENYGIK-KGISAD-RLEKHVQEICVQKVNELSQYQMVWVDEDGFLLRPLDPGRLMTKYYL 546
Query: 479 QFSSVQ 484
+F +++
Sbjct: 547 RFDTMK 552
>Medtr7g075463.1 | ATP-binding; ATP-dependent helicase; DNA helicase
| HC | chr7:28265418-28275446 | 20130731
Length = 1252
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/488 (32%), Positives = 268/488 (54%), Gaps = 27/488 (5%)
Query: 14 YLH-KDEFKIVYVAPMKALAAEVTRTFSQRLSPLNMTVRELTGDMQ-LSKNELEETQMIV 71
++H K K +Y+AP KAL E R ++Q+ P + ELTGD + + + E +I+
Sbjct: 75 FIHVKGSLKTIYIAPSKALVQEKVRDWNQKFGPWGICCLELTGDNESYTPRNINEADIIL 134
Query: 72 TTPEKWDVITR---KSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESSQT 128
TTPEK+D ++R +S +S + LL+IDEVHLLND RG +EA+V+R ++ + +
Sbjct: 135 TTPEKFDAVSRYGIESGGLSFFSDIALLLIDEVHLLNDPRGAALEAIVSR-IKIISCNPK 193
Query: 129 M-------IRIVGLSATLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGISEQNF 181
M +R + LSAT+PN ++A++L V PD G+ F RPV L + G +
Sbjct: 194 MKLNPLAQVRFLALSATIPNIEDLAKWLLV-PDQGIKRFGEEMRPVKLTTKVFGYA---- 248
Query: 182 AARNELLNDICYKKVVESI----RQGYQAMVFVHSRKDTAKTAQKLVELVQKHEELELFS 237
A+N+ L + + + I +G A++F +RK + AQ+L ++V + F
Sbjct: 249 PAKNDFLFEKRLQNYIFDILMQYSKGKSALIFCSTRKGAQEAAQRLAQIVMNFGQSNPFI 308
Query: 238 NNTHAQYSLMKREVVKS-RNRDVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVC 296
+ Q L RE S ++ + +G+G H+ G+ DR + E LF G ++VL
Sbjct: 309 KSREQQDQL--REASMSLSDKQMQSYILYGVGYHNGGLCHKDRSIVEGLFLKGDIQVLCT 366
Query: 297 TATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIIT 356
T TLA G+NLPAHTVVIK TQ ++ + + + ++Q+ GRAGRP FD +G II+T
Sbjct: 367 TNTLAHGINLPAHTVVIKSTQHFNKEKSLYMEYDRSTILQMSGRAGRPPFDDTGMVIIMT 426
Query: 357 SHEKLAYYLRLLTSQLPIESQFITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRM 416
E + Y LL+ +ESQ ++ + ++L AE+ TV+++ +A W+ +YL++RM+
Sbjct: 427 RRETVHLYENLLSGCEVVESQLLSCVTEHLLAEIVQLTVSDITKAIEWMKCSYLYVRMKR 486
Query: 417 NPLAYGIGWDEVMADPNLSSKQRSLVIDAARALDKAKMMRFDEKSGSFYCTELGRIASHF 476
NP YGI + AD L + + + L + +M+ DE + GR+ + +
Sbjct: 487 NPENYGIK-KGISAD-RLEKHVQEICVQKVNELSQYQMVWVDEDGFLLRPLDPGRLMTKY 544
Query: 477 YIQFSSVQ 484
Y++F +++
Sbjct: 545 YLRFDTMK 552
>Medtr7g075463.3 | ATP-binding; ATP-dependent helicase; DNA helicase
| HC | chr7:28265418-28275446 | 20130731
Length = 1050
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/488 (32%), Positives = 268/488 (54%), Gaps = 27/488 (5%)
Query: 14 YLH-KDEFKIVYVAPMKALAAEVTRTFSQRLSPLNMTVRELTGDMQ-LSKNELEETQMIV 71
++H K K +Y+AP KAL E R ++Q+ P + ELTGD + + + E +I+
Sbjct: 75 FIHVKGSLKTIYIAPSKALVQEKVRDWNQKFGPWGICCLELTGDNESYTPRNINEADIIL 134
Query: 72 TTPEKWDVITR---KSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESSQT 128
TTPEK+D ++R +S +S + LL+IDEVHLLND RG +EA+V+R ++ + +
Sbjct: 135 TTPEKFDAVSRYGIESGGLSFFSDIALLLIDEVHLLNDPRGAALEAIVSR-IKIISCNPK 193
Query: 129 M-------IRIVGLSATLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGISEQNF 181
M +R + LSAT+PN ++A++L V PD G+ F RPV L + G +
Sbjct: 194 MKLNPLAQVRFLALSATIPNIEDLAKWLLV-PDQGIKRFGEEMRPVKLTTKVFGYA---- 248
Query: 182 AARNELLNDICYKKVVESI----RQGYQAMVFVHSRKDTAKTAQKLVELVQKHEELELFS 237
A+N+ L + + + I +G A++F +RK + AQ+L ++V + F
Sbjct: 249 PAKNDFLFEKRLQNYIFDILMQYSKGKSALIFCSTRKGAQEAAQRLAQIVMNFGQSNPFI 308
Query: 238 NNTHAQYSLMKREVVKS-RNRDVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVC 296
+ Q L RE S ++ + +G+G H+ G+ DR + E LF G ++VL
Sbjct: 309 KSREQQDQL--REASMSLSDKQMQSYILYGVGYHNGGLCHKDRSIVEGLFLKGDIQVLCT 366
Query: 297 TATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIIT 356
T TLA G+NLPAHTVVIK TQ ++ + + + ++Q+ GRAGRP FD +G II+T
Sbjct: 367 TNTLAHGINLPAHTVVIKSTQHFNKEKSLYMEYDRSTILQMSGRAGRPPFDDTGMVIIMT 426
Query: 357 SHEKLAYYLRLLTSQLPIESQFITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRM 416
E + Y LL+ +ESQ ++ + ++L AE+ TV+++ +A W+ +YL++RM+
Sbjct: 427 RRETVHLYENLLSGCEVVESQLLSCVTEHLLAEIVQLTVSDITKAIEWMKCSYLYVRMKR 486
Query: 417 NPLAYGIGWDEVMADPNLSSKQRSLVIDAARALDKAKMMRFDEKSGSFYCTELGRIASHF 476
NP YGI + AD L + + + L + +M+ DE + GR+ + +
Sbjct: 487 NPENYGIK-KGISAD-RLEKHVQEICVQKVNELSQYQMVWVDEDGFLLRPLDPGRLMTKY 544
Query: 477 YIQFSSVQ 484
Y++F +++
Sbjct: 545 YLRFDTMK 552
>Medtr4g008780.1 | U5 small nuclear ribonucleoprotein 200 kDa
helicase | HC | chr4:1682714-1679988 | 20130731
Length = 890
Score = 216 bits (549), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 142/482 (29%), Positives = 238/482 (49%), Gaps = 32/482 (6%)
Query: 21 KIVYVAPMKALAAEVTRTFSQRLSP-LNMTVRELTGDMQLSKNELEETQMIVTTPEKWDV 79
++VYVAP++ALA E R + ++ L + V ELTG+ LE+ Q+I++TPEKWD
Sbjct: 137 RVVYVAPIEALAKERYRDWEKKFGGGLKLAVVELTGETTTDLKLLEKGQIIISTPEKWDA 196
Query: 80 ITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESSQTMIRIVGLSATL 139
++R+ V L IIDE+HL+ RG V+E +V+R + IR V LS ++
Sbjct: 197 LSRRWKQRKHVQQVSLFIIDELHLIGGQRGSVLEVIVSRMKYIANQVENKIRFVALSTSV 256
Query: 140 PNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGISEQNFAARNELLNDICYKKVVES 199
N ++ ++ GLF F RPVPL + NF AR + + Y + +
Sbjct: 257 ANAKDLGDWIGAT-SHGLFNFSPVVRPVPLEIHIQSVDIANFKARMQAMTKRTYTAIAQH 315
Query: 200 IRQGYQAMVFVHSRKDTAKTAQKLVE-----------LVQKHEELELFSNNTHAQYSLMK 248
+ G A+VFV +RK T L+ L+Q +ELE F N +
Sbjct: 316 AKNGKPALVFVPTRKHVRLTTMDLITYSSADSGEKSFLLQSTKELEPFLNK-------IS 368
Query: 249 REVVKSRNRDVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPA 308
E++K R+ G+G H G+ D + +LF G ++ V ++++ + L A
Sbjct: 369 DEMLKVTLRE-------GVGYLHEGLSSLDHDIEAQLFEAGWIQDCVLSSSMCYKDTLLA 421
Query: 309 HTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAYYLRLL 368
H VV+ GTQ YD + D + D++Q+ G A RP D SG+ +I+ YY + L
Sbjct: 422 HLVVVMGTQYYDGE-NAQTDYPVTDLLQMMGHASRPLVDHSGKCVILCHAPSKEYYKKFL 480
Query: 369 TSQLPIESQFITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIGWDEV 428
P+ES L DN+NAE+ G + N ++ +L +T+++ R+ NP Y + +
Sbjct: 481 FEAFPVESHLHHFLHDNMNAEIVAGIIENKQDDVDYLTWTFMYRRLTQNPNYYNL---QG 537
Query: 429 MADPNLSSKQRSLVIDAARALDKAKMMRFDEKSGSFYCTELGRIASHFYIQFSSVQTYNE 488
++ +LS LV + L+ +K + E LG I+S++ I +++++ ++
Sbjct: 538 VSHRHLSDYLSELVENTLSDLEASKCVSI-EDDIHLSPLNLGMISSYYNISYTTIERFSS 596
Query: 489 ML 490
+
Sbjct: 597 YI 598
>Medtr2g030905.1 | U5 small nuclear ribonucleoprotein 200 kDa
helicase | LC | chr2:11697696-11700581 | 20130731
Length = 961
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 145/499 (29%), Positives = 256/499 (51%), Gaps = 35/499 (7%)
Query: 2 TCMQIG--QHFKDGYLHKDEFKIVYVAPMKALAAEVTRTFSQRLSP-LNMTVRELTGDMQ 58
TC +I ++ + G++ ++VY+AP++A+A R + + LN + ELTG+ +
Sbjct: 184 TCAEIAILRNHQKGHM-----RVVYIAPIRAIAQNQYREWKTKFGGGLNSMIVELTGENE 238
Query: 59 LSKNELEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVAR 118
LEE Q+I+TTP+ WD ++R+ + V LLI+D++H + G ++E ++ R
Sbjct: 239 TDLKLLEEGQIIITTPQIWDALSRQWKQIIQIQQVPLLILDDLHFIGGPEGHILERIIVR 298
Query: 119 TLRQVESS-QTMIRIVGLSATLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPL-----AQQ 172
++Q+ + +RIV LSA + N ++ +++ + LF F T R VPL +
Sbjct: 299 -MKQISTRVGKKMRIVALSAPITNGKDIGEWIGATSHS-LFNFSPTARHVPLELFIKVVE 356
Query: 173 YIGISEQNFAARNELLNDICYKKVVESIRQGYQAMVFVHSRKDTAKTAQKLVELVQKHEE 232
+ + N R + + I + + E ++G +V+V + ++ ++T ++ + Q
Sbjct: 357 FSDLRSANPLVRLKEMAKITHSFITEHAKKGKPILVYVPTWENVSRTVFNMISVSQAKSW 416
Query: 233 LELFSNNTHAQYSLMKREVVKSRNRDVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLK 292
++L S Q+ + + K N ++ G+G H G+ D+ R F GL+K
Sbjct: 417 VQLNSQ----QHQAFEASICKISNLELKSALALGVGFLHEGLNTNDQEFVIRSFEAGLIK 472
Query: 293 VLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEG 352
+ + ++++ W V+L AH VV+ GT+ YD + + D++ + G+AGR D G+
Sbjct: 473 ICIISSSMCWEVSLSAHIVVLMGTEYYDFDGPSY---PITDILHMMGQAGRRLIDSVGKA 529
Query: 353 IIITSHEKLAYYLRLLTSQLPIESQFITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFI 412
+I+ K YY LL LPIES F L D +NAE+ G V N K+A +L ++L
Sbjct: 530 LILCLPNKKRYYNILLRDLLPIESHFHNCLNDTVNAEIVAGIVENFKDAVDYLEKSFLCR 589
Query: 413 RMRMNPLAYG----IGWDEVMADPNLSSKQRSLVIDAARALDKAKMMRFDEKSGSFYCTE 468
R+ NP Y IG D A +LS SLV + L + M+R DE + +
Sbjct: 590 RLPKNPSYYDFPGFIGED---AGTHLS----SLVQRSMNELMTSGMVR-DEGGDNISSSV 641
Query: 469 LGRIASHFYIQFSSVQTYN 487
LGRIAS+ YI + ++ ++
Sbjct: 642 LGRIASNNYINYRTIGAFS 660
>Medtr2g064390.1 | U5 small nuclear ribonucleoprotein helicase | LC |
chr2:29190848-29183241 | 20130731
Length = 1579
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 226/487 (46%), Gaps = 41/487 (8%)
Query: 22 IVYVAPMKALAAEVTRTFSQRL-SPLNMTVRELTGDMQLSKNELEETQMIVTTPEKWDVI 80
+VY+ P + LA + + ++ + L + V EL+GD Q+ L E Q+IV+TPE+WD +
Sbjct: 811 VVYLTPNETLAKQQYLDWDKKFGNGLKLKVVELSGDPQIDLELLREGQIIVSTPERWDAL 870
Query: 81 TRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVART------LRQVESSQTMIRIVG 134
R M+++M V L IID++HL+ + G VIE V+R + S + +R+VG
Sbjct: 871 NRSRKAMNVAMSVSLFIIDQLHLIGEQGGHVIEGTVSRMKSHDIGINYFIKSYSKVRLVG 930
Query: 135 LSATLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQ----QYIGISEQNFAARNELLND 190
LS ++ N ++ +++ G F F PL + Q G+ NF AR + +
Sbjct: 931 LSTSVSNAKDLGEWIGAT-SHGFFNF-------PLGKSVEIQTQGVDVANFEARMQAMTK 982
Query: 191 ICYKKVVESIRQGYQAMVFVHSRKDTAKTAQKLVELVQKHEELELFSNNTHAQY----SL 246
Y + + ++ ++VFV SRK A L++ + F N A+ +
Sbjct: 983 PTYIAITQLVKNEQTSIVFVPSRKYVRLVAVDLIKYKGADGDKRSFLLNPLAELVPFINK 1042
Query: 247 MKREVVKSRNRDVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNL 306
+ E++K+ R+ G+G H G+ +DR + + F GL++V + T+++ V L
Sbjct: 1043 ISDEMLKTTLRE-------GVGFLHEGLNGSDRDIVTQSFKSGLIQVCIITSSICREVKL 1095
Query: 307 PAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAYYLR 366
V++ GTQ YD + + D++Q+ P + G+ II+ + YY
Sbjct: 1096 STPLVIVMGTQYYDGPENSQTNYPVADLLQMVQPVSSPLVNGHGKCIILCHTPREEYYKA 1155
Query: 367 LLTSQLPIESQFITSLKDNLNAEVALGTVTNVKEACA-WLGYTYLFIRMRMNPLAYGIGW 425
LL P+ES L D++ VA + K+ +L T+L+ R+ NP YG
Sbjct: 1156 LLCGTYPVESVLPHFLHDSILVGVAGKFIFFKKDVVENYLANTFLYKRLTRNPEFYGCQ- 1214
Query: 426 DEVMADPNLSSKQRSLVIDAARALDKAKMMRFDEKSGSFYCTELGRIASHFYIQFSSVQT 485
+L+ + + L + K + + YCT+ G FYI + ++
Sbjct: 1215 -------DLAVRMSDFGKNTIADLQENKCVLLGDD--RIYCTDQGEKTIKFYITYKTMAM 1265
Query: 486 YNEMLRR 492
++ L +
Sbjct: 1266 FSASLTQ 1272
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 375 ESQFITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIGWDEVMADPNL 434
ESQFI+ L D LNAE+ LGTV NVKEA W+ +TY ++ M NP +YG+ D + D +
Sbjct: 327 ESQFISKLADQLNAEIVLGTVQNVKEARLWIRHTYTYVCMLTNPSSYGLAADVIAKD--I 384
Query: 435 SSKQRSLVIDAARALDKAKMMRFDEKSGSFYCTELGRIASHFYIQFSSVQTYNEMLRRHM 494
+ L+ +AA LD++ ++++D SG F T+ GRIAS+ + ++ Y+ L+ M
Sbjct: 385 ENNIDDLIHEAATLLDESNLVKYDANSGCFQVTDFGRIASYHNVAHRTISMYDNSLKPTM 444
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 101/178 (56%), Gaps = 19/178 (10%)
Query: 12 DGYLHKDEFKIVYVAPMKALAAEVTRTFSQRLSPLNMTVRELTGDMQLSKNELEETQMIV 71
+GY+ +KI+Y+ +A+ ++ R + + V EL+ D ++ ++EE+Q++
Sbjct: 165 NGYIDHSAYKILYMTHSEAVV-KLVRMLRKTFEDYGIKVGELSEDPSVTWEQIEESQIM- 222
Query: 72 TTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESSQTMIR 131
+ + + +KL+IID+ H LND+RG +E+++ RT+ +++ IR
Sbjct: 223 -------------NHRTYTEQLKLIIIDDCHFLNDNRGFALESVMTRTILHMKNC---IR 266
Query: 132 IVGLSATLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGISE-QNFAARNELL 188
+VG SAT P Y++VA+FL V+ + G+F FD +YR + + + + + + A +N ++
Sbjct: 267 LVGFSATFPYYVDVARFLTVDVNNGIFTFDDSYRHIQIEMNRVCMEKVMSIAGKNPVI 324
>Medtr1g008600.1 | ATP-binding; ATP-dependent helicase; DNA helicase |
HC | chr1:991547-976147 | 20130731
Length = 2177
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 212/502 (42%), Gaps = 95/502 (18%)
Query: 23 VYVAPMKALAAEVTRTFSQRLSPLNMTVRELTGDMQLSKNELEETQMIVTTPEKWD-VIT 81
+ V P ++ E + L PL VR G+ Q + ++T + V T EK + +I
Sbjct: 573 ILVLPYVSICTEKAEHLEKLLEPLGKHVRSYYGN-QGGGSLPKDTSVAVCTIEKANSLIN 631
Query: 82 RKSSDMSLSMLVKLLIIDEVHLLND-DRGPVIEALVAR-------------------TLR 121
R + LS + +++IDE+H++ D RG ++E ++ +
Sbjct: 632 RLLEEGRLSEM-GIIVIDELHMVGDPKRGYLLELMLTKLRYAAGEGISKSSDGEGSGGSS 690
Query: 122 QVESSQTMIRIVGLSATLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGISEQNF 181
++IVG+SAT+PN VA +L+ + + +RPVPL ++YI + +
Sbjct: 691 DKNDPAQGLQIVGMSATMPNVAAVADWLQA------ALYQTEFRPVPL-EEYIKVGNSIY 743
Query: 182 AARNELLNDI-------------CYKKVVESIRQGYQAMVFVHSRKDTAKTAQKLVELVQ 228
EL I + E +++G ++F SRK TA+ + + ++
Sbjct: 744 NKSMELSRTIPKGADLGGKDPDHVVELCNEVVQEGQSVLIFCSSRKGCESTARHVAKFLK 803
Query: 229 K-----HEELELFSNNTHAQYSLMKREVVKSRNRDVVDLFEFGMGIHHAGMLRADRGLTE 283
+E F++ T A SL R+ + + + F G+ HHAG+ +R + E
Sbjct: 804 SFTVDINENNCEFADITSAINSL--RKCPAGLDPVLEETFPAGVAFHHAGLTVEEREIVE 861
Query: 284 RLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGR 343
+ GLL+VL T+TLA GVNLPA V+ + ++ G R MQ+ GRAGR
Sbjct: 862 TCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGCDFIDGTR------YMQMAGRAGR 915
Query: 344 PQFDKSGEGIIITSHEKLAYYLRLLTSQLPIESQFITSLKDNLNA------EVALGTVTN 397
D GE ++I ++L + LL P + L ++LN EV G +
Sbjct: 916 TGIDTKGESVLICKPQELKKVMGLLNESCP---PLHSCLSEDLNGMTHAILEVVAGGIVQ 972
Query: 398 VKE------ACAWLGYTYLFIRMRMNPLAYGIGWDEVMADPNLSSKQRSLVIDAARALDK 451
C L T F+ + + S Q SL R L +
Sbjct: 973 TANDIHRYVRCTLLNSTKPFLDV-------------------VKSAQESL-----RWLCQ 1008
Query: 452 AKMMRFDEKSGSFYCTELGRIA 473
K + ++E + + T LGR +
Sbjct: 1009 RKFLEWNEDTKLYSTTPLGRAS 1030
>Medtr7g080730.1 | superkiller viralicidic activity-like protein |
HC | chr7:30721960-30732583 | 20130731
Length = 983
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 172/392 (43%), Gaps = 80/392 (20%)
Query: 21 KIVYVAPMKALAAEVTRTFSQRLSPLNMTVRELTGDMQLSKNELEETQMIVTTPEKWDVI 80
+++Y +P+KAL+ + R F + S + + +TGD+ + N +V T E W +
Sbjct: 105 RVIYTSPIKALSNQKYREFKEEFSDVGL----MTGDVTIDPN----ASCLVMTTEIWRSM 156
Query: 81 TRKSSDMSLSMLVKLLIIDEVHLLND-DRGPVIEALVARTLRQVESSQTMIRIVGLSATL 139
K S+++ V +I DEVH + D +RG V E + + + R V LSAT+
Sbjct: 157 QYKGSEVTRE--VAWIIFDEVHYMRDRERGVVWEESIVMSPKNA-------RFVFLSATV 207
Query: 140 PNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGISEQNFAARNE---LLNDICYKKV 196
PN E A ++ + YRP PL Q YI F + +E L+ D K
Sbjct: 208 PNAKEFADWVAKVHQQPCHIVYTDYRPTPL-QHYI------FPSGSEGLYLVVDEKGKFR 260
Query: 197 VESIRQGYQAMVFVHS---RKDTAKTAQKLVELVQKHEELELFS---------NNTHAQY 244
+S ++ A++ +K+ AK + LV L + EE ++F + +
Sbjct: 261 EDSFQKALNALIPAADGDRKKENAKWQKGLV-LGKAAEESDIFKMVKMIIQRQYDPVILF 319
Query: 245 SLMKREV---------------VKSRN----------------------RDVVDLFEFGM 267
S KRE ++ N +++ L + G+
Sbjct: 320 SFSKRECEFLAMQMAKMDLNGDIEKDNIEKIFWCAMDMLSDDDKKLPQVSNMLPLLKRGI 379
Query: 268 GIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWR 327
G+HH+G+L + + E LF +GL+K L T T + G+N+PA TVV + +D W
Sbjct: 380 GVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWI 439
Query: 328 DLGMLDVMQIFGRAGRPQFDKSGEGIIITSHE 359
G + +Q+ GRAGR D G I++ +
Sbjct: 440 TSG--EYIQMSGRAGRRGIDDRGVCILMVDEK 469
>Medtr8g101340.1 | RNA helicase, ATP-dependent, SK12/DOB1 protein |
HC | chr8:42553280-42543791 | 20130731
Length = 984
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 186/422 (44%), Gaps = 75/422 (17%)
Query: 17 KDEFKIVYVAPMKALAAEVTRTFSQRLSPLNMTVRELTGDMQLSKNELEETQMIVTTPEK 76
+D+ +++Y +P+KAL+ + R SQ + + + +TGD+ LS N T +++TT
Sbjct: 124 RDKQRVIYTSPLKALSNQKYRELSQEFTDVGL----MTGDVTLSPNA---TCLVMTTEIL 176
Query: 77 WDVITRKSSDMSLSMLVKLLIIDEVHLLND-DRGPVIEALVARTLRQVESSQTMIRIVGL 135
++ R S + V +I DE+H + D +RG V E + I++V L
Sbjct: 177 RGMLYRGSEVLKE---VAWVIFDEIHYMKDRERGVVWEESIIFL-------PPAIKMVFL 226
Query: 136 SATLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQY---IGIS-------------EQ 179
SAT+ N E A+++ + +RP PL Q Y IG S E
Sbjct: 227 SATMSNATEFAEWICNIHKQPCHVVYTDFRPTPL-QHYVFPIGGSGLYLVVDENEQFRED 285
Query: 180 NFAARNELL--------------------------NDICYKKVVESIRQGYQA-MVFVHS 212
NF + +DI YK V + + +Q ++F S
Sbjct: 286 NFLKVEDTFVKQKLGEGKGGKTNGRFGKGGSASGGSDI-YKIVKMIMERKFQPVIIFSFS 344
Query: 213 RKDTAKTAQKLVEL-VQKHEELE----LFSNNTHAQYSLMKREVVKSRNRDVVDLFEFGM 267
R++ + A + +L EE + +F N A L + + ++ L + G+
Sbjct: 345 RRECEQHAMSMSKLDFNSQEEKDTVEHVFQN---AMLCLNEEDRSLPAIELMLPLLQRGI 401
Query: 268 GIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWR 327
+HH+G+L + L E LF +GL+K L T T A G+N+PA TVV + +D R
Sbjct: 402 AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD--GDSHR 459
Query: 328 DLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAYYLR--LLTSQLPIESQFITSLKDN 385
+G + +Q+ GRAGR D+ G II+ + L+ +L P+ S F S
Sbjct: 460 YIGSGEYIQMSGRAGRRGKDERGICIIMIDEQMEMNNLKDMVLGKPAPLVSTFRLSYYSI 519
Query: 386 LN 387
LN
Sbjct: 520 LN 521
>Medtr5g069360.1 | DEAD/DEAH-box RNA helicase | HC |
chr5:29403540-29411488 | 20130731
Length = 967
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 177/371 (47%), Gaps = 54/371 (14%)
Query: 17 KDEFKIVYVAPMKALAAEVTRTFSQRLSPLNMTVRELTGDMQLSKNELEETQMIVTTPEK 76
+D+ K++Y +P+K+L + Q + + + +TGD+ + +E + +I+TT
Sbjct: 121 RDKRKVLYTSPLKSLNNQKYSELRQEFTDVGL----ITGDITIYPSEAK--CLIMTTEIL 174
Query: 77 WDVITRKSSDMSLSMLVKLLIIDEVHLLND-DRGPVIEALVARTLRQVESSQTMIRIVGL 135
++ R S ++ V +I DE+H + D +RG V E + +++V L
Sbjct: 175 RGMLYRGSEVLNE---VDWVIFDEIHCMKDGERGVVWEESIILL-------PPTVKMVFL 224
Query: 136 SATLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYI---------GISEQN--FAAR 184
SATL N LE A+++ + +RP P+ Q Y+ I ++N F
Sbjct: 225 SATLSNALEFAEWISTLRKQPCHVICTNFRPTPI-QHYVFPIGGRRLYPIVDENEEFMGD 283
Query: 185 NELL--NDICYKKVVES------------IRQGYQAM-VFVHSRKDTAKTAQKLVEL--- 226
N ++ N +K+ E + + +Q + VF S+K+ + + +L
Sbjct: 284 NFVMAENTFLKQKLGEGNKGDMFKIVKMIMEKKFQPIIVFSFSKKECEHNLKSISKLDFN 343
Query: 227 VQKHEE--LELFSNNTHAQYSLMKREVVKSRNRDVVDLFEFGMGIHHAGMLRADRGLTER 284
Q+ +E L++F A +L + + ++V+ + G+GIHH+G+L + L E
Sbjct: 344 TQEEKERVLDIFE---MAVLTLNEEDRSLCAIKEVLPHLQRGIGIHHSGLLPVIKELVEL 400
Query: 285 LFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRP 344
LF +GL+K L T T A G+N+PA TVV + +D + G + +Q+ GRAGR
Sbjct: 401 LFQEGLVKALFATETFAMGLNMPAKTVVFSSVKKWDGHEHRYIRSG--EYIQMSGRAGRR 458
Query: 345 QFDKSGEGIII 355
D+ G II+
Sbjct: 459 GKDEHGICIIM 469
>Medtr4g008770.1 | U5 small nuclear ribonucleoprotein 200 kDa
helicase, putative | LC | chr4:1676751-1672827 |
20130731
Length = 666
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Query: 21 KIVYVAPMKALAAEVTRTFSQRLSP-LNMTVRELTGDMQLSKNELEETQMIVTTPEKWDV 79
++VY AP++ALA E R + ++ L + V ELTG+ LE+ Q+I++TPEKWD
Sbjct: 197 RVVYEAPIEALAKERYRDWEKKFGGGLKLAVVELTGETTTDLKLLEKGQIIISTPEKWDA 256
Query: 80 ITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESSQTMIRIVGLSATL 139
++R+ V L IIDE+HL+ RGPV+E +V+R + IR V LS ++
Sbjct: 257 LSRRWKQRKHVQQVSLFIIDELHLIGGQRGPVLEVIVSRMKYIANQVENKIRFVALSTSV 316
Query: 140 PNYLEVAQFL 149
N ++ ++
Sbjct: 317 ANAKDLGDWI 326
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
Query: 21 KIVYVAPMKALAAEVTRTFSQRLSP-LNMTVRELTGDMQLSKNELEETQMIVTTPEKWDV 79
++VY AP++ALA E R + ++ L + V ELTG+ LE+ Q+I++TPEKWD
Sbjct: 509 RVVYEAPIEALAKERYRDWEKKFGGGLKLAVVELTGETTTDLKLLEKGQIIISTPEKWDA 568
Query: 80 ITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESSQTMIRIVGLSATL 139
++R+ V L IIDE+HL+ RG V+E +V+R + IR V LS ++
Sbjct: 569 LSRRWKQRKHVQQVSLFIIDELHLIGGQRGTVLEVIVSRMKYIANQVENKIRFVALSTSV 628
Query: 140 PNYLEVAQFL 149
N ++ ++
Sbjct: 629 ANAKDLGDWI 638
>Medtr3g462290.1 | RNA helicase, ATP-dependent, SK12/DOB1 protein |
HC | chr3:24871545-24853513 | 20130731
Length = 1334
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 207 MVFVHSRKDTAKTAQKLV--ELVQKHE--ELELFSNNTHAQYSLMKR---EVVKSRNRDV 259
++F S+ K+A + +L E E+ LF + ++ R +VV+ V
Sbjct: 637 VIFCFSKNRCDKSADSMTGTDLTSSSEKSEIRLFCDKAFSRLKGSDRNLPQVVR-----V 691
Query: 260 VDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLY 319
L G+G+HHAG+L + + E LF G++KVL T T A GVN PA TVV + +
Sbjct: 692 ESLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTVRKF 751
Query: 320 DPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHE 359
D K +R L + Q+ GRAGR D G I++ E
Sbjct: 752 DGKE--FRQLLPGEYTQMAGRAGRRGLDNIGTVILMCRDE 789
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 21 KIVYVAPMKALAAEVTRTFSQRLSPLNMTVRELTGDMQLSKNELEETQMIVTTPEKWDVI 80
+ VY AP+K ++ + R F + V LTGD+ L E ++ T E +
Sbjct: 393 RAVYTAPIKTISNQKYRDFCGKFD-----VGLLTGDVSLRP----EASCLIMTTEILRSM 443
Query: 81 TRKSSDMSLSMLVKLLIIDEVHLLND-DRGPVIEALVARTLRQVESSQTMIRIVGLSATL 139
+ +D+ ++ +I DEVH +ND DRG V E ++ R I I+ LSAT+
Sbjct: 444 LYRGADIIRD--IEWVIFDEVHYVNDVDRGVVWEEVIIMLPRH-------INIILLSATV 494
Query: 140 PNYLEVAQFLRVNPDAGLFFFDSTYRPVPL 169
PN +E A ++ + +T RPVPL
Sbjct: 495 PNTVEFADWIGRTKQKEIRVTGTTKRPVPL 524
>Medtr5g036660.1 | DEAD-box ATP-dependent RNA helicase ISE2 | HC |
chr5:16017947-16009934 | 20130731
Length = 1155
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 88/183 (48%), Gaps = 17/183 (9%)
Query: 206 AMVFVHSRKDTAKTAQ-----KLVELVQKHEELELFSNNTHAQYSLMKREVVKSRNRDVV 260
A+ F+ SRK Q KL++ + E L L QY RE V
Sbjct: 431 AVWFIFSRKGCDAAVQYVEDCKLLDECEASEVL-LALKRFRIQYPDAVRETA------VK 483
Query: 261 DLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYD 320
L + G+ HHAG L + E LF GL+KV+ T TLA G+N+PA T VI + L
Sbjct: 484 GLLQ-GVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTAVI--SSLSK 540
Query: 321 PKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIII-TSHEKLAYYLRLLTSQL-PIESQF 378
G L +++Q+ GRAGR D+SG +++ T +E ++L S L P+ SQF
Sbjct: 541 RSDTGRTLLTSNELLQMAGRAGRRGIDESGHVVLVQTPNEGAEECCKVLFSGLEPLVSQF 600
Query: 379 ITS 381
S
Sbjct: 601 TAS 603
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 29/174 (16%)
Query: 21 KIVYVAPMKALAAEVTRTFSQRLSPLNMTVRELTGDMQLSKNELEETQMIVTTPE----- 75
++ Y P+KAL+ + R F + N+ + LTGD ++K+ Q+++ T E
Sbjct: 190 RLFYTTPLKALSNQKFREFRETFGDSNVGL--LTGDSAVNKD----AQVLIMTTEILRNM 243
Query: 76 KWDVITRKSSDMSLSMLVKLLIIDEVHLLND-DRGPVIEALVARTLRQVESSQTMIRIVG 134
+ + SS L + V ++++DEVH L+D RG V E +V + V+ ++
Sbjct: 244 LYQSVGNVSSGSGL-VNVDVIVLDEVHYLSDISRGTVWEEIVIYCPKAVQ-------LIC 295
Query: 135 LSATLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGISEQNFAARNELL 188
LSAT+ N E+A ++ G S+ RPVPL +F+ +N LL
Sbjct: 296 LSATVANPDELAGWIG-QIHGGTELVTSSKRPVPL--------NWHFSLKNSLL 340
>Medtr1g007510.1 | DNA polymerase theta-like protein | HC |
chr1:413021-417854 | 20130731
Length = 912
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 116/291 (39%), Gaps = 64/291 (21%)
Query: 198 ESIRQGYQAMVFVHSRKDTAKTAQKLVELVQK-----HEELELFSNNTHAQYSLMKREVV 252
E +++G ++F SRK T + + + ++ +E F++ T A SL R+
Sbjct: 27 EVVQEGQSVLIFCSSRKGCESTGRHVAKFLKSFTVDINENNCEFADITSAINSL--RKCP 84
Query: 253 KSRNRDVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVV 312
+ + + F G+ HHAG+ +R + E + LL+VL T+TLA GVN PA V+
Sbjct: 85 AGLDPVLEETFPAGVAFHHAGLTVEEREIVETCYRKDLLRVLTATSTLAAGVNPPARRVI 144
Query: 313 IKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAYYLRLLTSQL 372
+ P+ G +D + AGR ++I ++L + LL
Sbjct: 145 FR-----QPRIG----CDFIDGTRYMQMAGR---------VVICKPQELKKVMGLLNESC 186
Query: 373 PIESQFITSLKDNLNA------EVALGTVTNVKE------ACAWLGYTYLFIRMRMNPLA 420
P + L ++LN EV G + C L T F+ +
Sbjct: 187 P---PLHSCLSEDLNGMIHAILEVVAGGIVQTTNDIHRYVRCTLLNSTKPFLDV------ 237
Query: 421 YGIGWDEVMADPNLSSKQRSLVIDAARALDKAKMMRFDEKSGSFYCTELGR 471
+ S Q SL R L + K + ++E + + T LGR
Sbjct: 238 -------------IKSAQESL-----RWLCQRKFLEWNEDTKLYSTTPLGR 270
>Medtr0312s0040.1 | DNA polymerase theta-like protein | HC |
scaffold0312:17550-12717 | 20130731
Length = 880
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 198 ESIRQGYQAMVFVHSRKDTAKTAQKLVELVQK-----HEELELFSNNTHAQYSLMKREVV 252
E +++G ++F SRK T + + + ++ +E F++ T A SL R+
Sbjct: 27 EVVQEGQSVLIFCSSRKGCESTGRHVAKFLKSFTVDINENNCEFADITSAINSL--RKCP 84
Query: 253 KSRNRDVVDLFEFGMGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVV 312
+ + + F G+ HHAG+ +R + E + LL+VL T+TLA GVN PA VV
Sbjct: 85 AGLDPVLEETFPAGVAFHHAGLTVEEREIVETCYRKDLLRVLTATSTLAAGVNPPARRVV 144
Query: 313 IKGTQ 317
I Q
Sbjct: 145 ICKPQ 149